RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 TMEM241Q24JQ0 296 aa6.77□□□□□ -1.33
CCM2-208ENST00000476594 NTM-AS1Q6ZSK4 140 aa6.77□□□□□ -1.33
CCM2-208ENST00000476594 GTSF1Q8WW33 167 aa6.77□□□□□ -1.33
CCM2-208ENST00000476594 BAALCQ8WXS3 180 aa6.77□□□□□ -1.33
CCM2-208ENST00000476594 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.76□□□□□ -1.33
CCM2-208ENST00000476594 TRAV8-4A0A0B4J246 113 aa6.76□□□□□ -1.33
CCM2-208ENST00000476594 A0A1B0GUV1 79 aa6.76□□□□□ -1.33
CCM2-208ENST00000476594 EPM2AB3EWF7 344 aa6.76□□□□□ -1.33
CCM2-208ENST00000476594 LECT2O14960 151 aa6.76□□□□□ -1.33
CCM2-208ENST00000476594 HLA-DQA1P01909 254 aa6.76□□□□□ -1.33
CCM2-208ENST00000476594 RIGQ13278 110 aa6.76□□□□□ -1.33
CCM2-208ENST00000476594 NAT8Q9UHE5 227 aa6.76□□□□□ -1.33
CCM2-208ENST00000476594 FAM229AH3BQW9 127 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 PPP1R17O96001 155 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 APCSP02743 223 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 REG3AQ06141 175 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 ADIRFQ15847 76 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 C4orf48Q5BLP8 95 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 AMMECR1LQ6DCA0 310 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 ENHOQ6UWT2 76 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 LINC00269Q8N2A0 174 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 GATD1Q8NB37 220 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 TMEM191AQ9H0A3 160 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 PRR34Q9NV39 138 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 NAT8BQ9UHF3 227 aa6.75□□□□□ -1.33
CCM2-208ENST00000476594 UBR4Q5T4S7 5183 aa6.74□□□□□ -1.33
CCM2-208ENST00000476594 TRAV26-2A0A0B4J265 109 aa6.74□□□□□ -1.33
CCM2-208ENST00000476594 SDHAF1A6NFY7 115 aa6.74□□□□□ -1.33
CCM2-208ENST00000476594 H7C423 109 aa6.74□□□□□ -1.33
CCM2-208ENST00000476594 PMCHP20382 165 aa6.74□□□□□ -1.33
CCM2-208ENST00000476594 RAB14P61106 215 aa6.74□□□□□ -1.33
CCM2-208ENST00000476594 SMAGPQ0VAQ4 97 aa6.74□□□□□ -1.33
CCM2-208ENST00000476594 ISOC2Q96AB3 205 aa6.74□□□□□ -1.33
CCM2-208ENST00000476594 MRAP2Q96G30 205 aa6.74□□□□□ -1.33
CCM2-208ENST00000476594 BTF3L4Q96K17 158 aa6.74□□□□□ -1.33
CCM2-208ENST00000476594 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 A0A1B0GW15 77 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 I3L3M4 83 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 S100A8P05109 93 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 XGP55808 180 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 RPL23P62829 140 aaKnown RBP6.73□□□□□ -1.33
CCM2-208ENST00000476594 WFDC2Q14508 124 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 CLPSL2Q6UWE3 100 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 CLRN3Q8NCR9 226 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 TMEM101Q96IK0 257 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 KRTAP4-6Q9BYQ5 205 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 ST20Q9HBF5 79 aa6.73□□□□□ -1.33
CCM2-208ENST00000476594 TRBV6-5A0A0K0K1A5 114 aa6.72□□□□□ -1.33
CCM2-208ENST00000476594 ZNF25P17030 456 aaPredicted RBP6.72□□□□□ -1.33
CCM2-208ENST00000476594 RNASEKQ6P5S7 137 aaKnown RBP6.72□□□□□ -1.33
CCM2-208ENST00000476594 V9GYV3 84 aa6.72□□□□□ -1.33
CCM2-208ENST00000476594 ABCA13Q86UQ4 5058 aa6.71□□□□□ -1.33
CCM2-208ENST00000476594 USP17L23D6RBM5 183 aa6.71□□□□□ -1.34
CCM2-208ENST00000476594 PPP1R2P9O14990 202 aa6.71□□□□□ -1.34
CCM2-208ENST00000476594 Q5VSD8 79 aa6.71□□□□□ -1.34
CCM2-208ENST00000476594 DGAT2L7PQ6IED9 249 aa6.71□□□□□ -1.34
CCM2-208ENST00000476594 CFAP161Q6P656 301 aa6.71□□□□□ -1.34
CCM2-208ENST00000476594 C20orf203Q8NBC4 194 aa6.71□□□□□ -1.34
CCM2-208ENST00000476594 NUP35Q8NFH5 326 aa6.71□□□□□ -1.34
CCM2-208ENST00000476594 RPL39LQ96EH5 51 aaKnown RBP6.71□□□□□ -1.34
CCM2-208ENST00000476594 AP5S1Q9NUS5 200 aa6.71□□□□□ -1.34
CCM2-208ENST00000476594 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.7□□□□□ -1.34
CCM2-208ENST00000476594 F8W036 122 aa6.7□□□□□ -1.34
CCM2-208ENST00000476594 TCAPO15273 167 aa6.7□□□□□ -1.34
CCM2-208ENST00000476594 IGLV4-60A0A075B6I1 120 aa6.69□□□□□ -1.34
CCM2-208ENST00000476594 IGLV10-54A0A075B6I4 117 aa6.69□□□□□ -1.34
CCM2-208ENST00000476594 SMIM27A0A1W2PRY6 76 aa6.69□□□□□ -1.34
CCM2-208ENST00000476594 LINC00862A6NCI5 91 aa6.69□□□□□ -1.34
CCM2-208ENST00000476594 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
CCM2-208ENST00000476594 RAB4AP20338 218 aa6.69□□□□□ -1.34
CCM2-208ENST00000476594 FCER1GP30273 86 aa6.69□□□□□ -1.34
CCM2-208ENST00000476594 PNRC1Q12796 327 aaPredicted RBP6.69□□□□□ -1.34
CCM2-208ENST00000476594 AMN1Q8IY45 258 aa6.69□□□□□ -1.34
CCM2-208ENST00000476594 TMEM18Q96B42 140 aa6.69□□□□□ -1.34
CCM2-208ENST00000476594 KIR2DL4Q99706 377 aa6.69□□□□□ -1.34
CCM2-208ENST00000476594 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
CCM2-208ENST00000476594 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.68□□□□□ -1.34
CCM2-208ENST00000476594 TRBV27A0A0K0K1C4 114 aa6.68□□□□□ -1.34
CCM2-208ENST00000476594 IGKV2-29A2NJV5 120 aaPredicted RBP6.68□□□□□ -1.34
CCM2-208ENST00000476594 C7orf77A4D0Y5 90 aa6.68□□□□□ -1.34
CCM2-208ENST00000476594 VCYO14598 125 aa6.68□□□□□ -1.34
CCM2-208ENST00000476594 FGF6P10767 208 aa6.68□□□□□ -1.34
CCM2-208ENST00000476594 Q6ZSA8 131 aa6.68□□□□□ -1.34
CCM2-208ENST00000476594 OR5A1Q8NGJ0 315 aa6.68□□□□□ -1.34
CCM2-208ENST00000476594 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
CCM2-208ENST00000476594 IGKV3OR2-268A0A0C4DH90 116 aa6.67□□□□□ -1.34
CCM2-208ENST00000476594 hDV102S1A0JD36 115 aa6.67□□□□□ -1.34
CCM2-208ENST00000476594 SMR3BP02814 79 aaPredicted RBP6.67□□□□□ -1.34
CCM2-208ENST00000476594 INAFM2P0DMQ5 153 aa6.67□□□□□ -1.34
CCM2-208ENST00000476594 CAMPP49913 170 aa6.67□□□□□ -1.34
CCM2-208ENST00000476594 SUMO2P61956 95 aaKnown RBP6.67□□□□□ -1.34
CCM2-208ENST00000476594 HBBP68871 147 aa6.67□□□□□ -1.34
CCM2-208ENST00000476594 SRSF3P84103 164 aaKnown RBP6.67□□□□□ -1.34
CCM2-208ENST00000476594 FAM104BQ5XKR9 115 aa6.67□□□□□ -1.34
CCM2-208ENST00000476594 RNF185Q96GF1 192 aa6.67□□□□□ -1.34
CCM2-208ENST00000476594 TMEM242Q9NWH2 141 aa6.67□□□□□ -1.34
CCM2-208ENST00000476594 C9JQL5 133 aa6.66□□□□□ -1.34
CCM2-208ENST00000476594 PRSS1P07477 247 aa6.66□□□□□ -1.34
CCM2-208ENST00000476594 CKS2P33552 79 aa6.66□□□□□ -1.34
CCM2-208ENST00000476594 POLR2KP53803 58 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms