RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PSPHP1O15172 72 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 SAA1P0DJI8 122 aaPredicted RBP2.97□□□□□ -1.93
CD55-208ENST00000476590 PI4KAP42356 2102 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 CLEC19AQ6UXS0 136 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 NKAPP1Q8N9T2 125 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 FAM218AQ96MZ4 157 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 DEFB126Q9BYW3 111 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 Q9HAA7 133 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 NDUFA12Q9UI09 145 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 ARHGAP32A7KAX9 2087 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 IGKV2-40A0A087WW87 121 aaPredicted RBP2.97□□□□□ -1.93
CD55-208ENST00000476590 IGHV3-15A0A0B4J1V0 119 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 TRAV10A0A0B4J240 114 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 IGKV2D-40P01614 121 aaPredicted RBP2.97□□□□□ -1.93
CD55-208ENST00000476590 SAA2P0DJI9 122 aaPredicted RBP2.97□□□□□ -1.93
CD55-208ENST00000476590 IGHV4-31P0DP07 118 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 SEC61BP60468 96 aaKnown RBP2.97□□□□□ -1.93
CD55-208ENST00000476590 WT1-ASQ06250 92 aa2.97□□□□□ -1.93
CD55-208ENST00000476590 RPL39LQ96EH5 51 aaKnown RBP2.97□□□□□ -1.93
CD55-208ENST00000476590 IGHV7-4-1A0A0J9YVY3 117 aa2.96□□□□□ -1.94
CD55-208ENST00000476590 C5orf67F2Z3F1 127 aa2.96□□□□□ -1.94
CD55-208ENST00000476590 JMJD7-PLA2G4BH0Y9G9 81 aa2.96□□□□□ -1.94
CD55-208ENST00000476590 MED14OSP0DP75 135 aa2.96□□□□□ -1.94
CD55-208ENST00000476590 CXCL6P80162 114 aa2.96□□□□□ -1.94
CD55-208ENST00000476590 TMEM30BQ3MIR4 351 aa2.96□□□□□ -1.94
CD55-208ENST00000476590 C9orf129Q5T035 196 aaKnown RBP2.96□□□□□ -1.94
CD55-208ENST00000476590 MAP6D1Q9H9H5 199 aa2.96□□□□□ -1.94
CD55-208ENST00000476590 IGKV3D-20A0A0C4DH25 116 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 C16orf90A8MZG2 172 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 BUB1B-PAK6H3BSN5 160 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 CTSGP08311 255 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 CCL4P13236 92 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 NREPQ16612 68 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 GPHB5Q86YW7 130 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 PRSS33Q8NF86 280 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 Q8TAT8 98 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 TMEM167AQ8TBQ9 72 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 ZNF625Q96I27 306 aaPredicted RBP2.95□□□□□ -1.94
CD55-208ENST00000476590 CCL13Q99616 98 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 TRAV21A0A0B4J279 112 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 IGHV1-18A0A0C4DH31 117 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 C10orf142B7Z368 130 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 H0YGX0 51 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 NCR3O14931 201 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 SLPIP03973 132 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 RNASE1P07998 156 aaKnown RBP2.95□□□□□ -1.94
CD55-208ENST00000476590 ZFP36P26651 326 aaKnown RBP2.95□□□□□ -1.94
CD55-208ENST00000476590 RPL39P62891 51 aaKnown RBP2.95□□□□□ -1.94
CD55-208ENST00000476590 HCP5Q6MZN7 132 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 LINC01560Q8TB33 94 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 LINC00308Q8TCZ7 52 aa2.95□□□□□ -1.94
CD55-208ENST00000476590 A0A0J9YXV3 536 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 PRB4P10163 310 aaPredicted RBP2.94□□□□□ -1.94
CD55-208ENST00000476590 RPS21P63220 83 aaKnown RBP2.94□□□□□ -1.94
CD55-208ENST00000476590 Q5VV11 94 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 BBC3Q96PG8 261 aaPredicted RBP2.94□□□□□ -1.94
CD55-208ENST00000476590 ORMDL1Q9P0S3 153 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 C11orf21Q9P2W6 132 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 ZNF580Q9UK33 172 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 CCL26Q9Y258 94 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 Q9Y3F1 56 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 KIF25-AS1Q9Y6Z4 181 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 ARFGEF3Q5TH69 2177 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 HCG22E2RYF7 251 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 IGKV1-16P04430 117 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 MGPP08493 103 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 POLR2KP53803 58 aaKnown RBP2.94□□□□□ -1.94
CD55-208ENST00000476590 ATP1A1-AS1Q5TC04 95 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 MIR7-3HGQ8N6C7 128 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 CCL4L1Q8NHW4 92 aa2.94□□□□□ -1.94
CD55-208ENST00000476590 PRR14LQ5THK1 2151 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 IGHV4OR15-8A0A075B7B6 117 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 A0A087WW49 117 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 LOC100131303A0A0U1RQF7 123 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 A8MU10 97 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 NDUFA1O15239 70 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 GNRH2O43555 120 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 LINC01547P58512 204 aaPredicted RBP2.93□□□□□ -1.94
CD55-208ENST00000476590 LINC00313P59037 77 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 LINC01554Q52M75 96 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 ITLN2Q8WWU7 325 aaPredicted RBP2.93□□□□□ -1.94
CD55-208ENST00000476590 LEAP2Q969E1 77 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 CYP4F30PQ9H0H9 118 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 SMAD5-AS1Q9Y6J3 95 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 IGHV1OR15-1A0A075B7D0 117 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 A0A087WYN8 130 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 CHKB-CPT1BH3BT56 60 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 ZNHIT1O43257 154 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 MP68P56378 58 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 C10orf55Q5SWW7 151 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 C11orf72Q8NBR9 251 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 ZNRF1Q8ND25 227 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 C1orf64Q8NEQ6 169 aa2.93□□□□□ -1.94
CD55-208ENST00000476590 PCNX2A6NKB5 2137 aa2.92□□□□□ -1.94
CD55-208ENST00000476590 ZGRF1Q86YA3 2104 aa2.92□□□□□ -1.94
CD55-208ENST00000476590 LRCOL1A6NCL2 159 aa2.92□□□□□ -1.94
CD55-208ENST00000476590 PSCAO43653 123 aa2.92□□□□□ -1.94
CD55-208ENST00000476590 CGB3P0DN86 165 aa2.92□□□□□ -1.94
CD55-208ENST00000476590 CGB7P0DN87 165 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms