RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 GAGE12GP0CL81 117 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 GAGE12IP0CL82 117 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 POM121L12Q8N7R1 296 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 KIF25-AS1Q9Y6Z4 181 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 PRKDCP78527 4128 aaKnown RBP12.92□□□□□ -0.34
ATG4B-217ENST00000475693 DNAH9Q9NYC9 4486 aa12.92□□□□□ -0.34
ATG4B-217ENST00000475693 CRYGDP07320 174 aa12.92□□□□□ -0.34
ATG4B-217ENST00000475693 LINC00315P59091 139 aa12.92□□□□□ -0.34
ATG4B-217ENST00000475693 SYT8Q8NBV8 401 aa12.92□□□□□ -0.34
ATG4B-217ENST00000475693 Q9UF83 564 aa12.91□□□□□ -0.34
ATG4B-217ENST00000475693 DEFB130BP0DP73 79 aa12.9□□□□□ -0.34
ATG4B-217ENST00000475693 DEFB130AP0DP74 79 aa12.9□□□□□ -0.34
ATG4B-217ENST00000475693 ODF1Q14990 250 aa12.9□□□□□ -0.34
ATG4B-217ENST00000475693 Q6ZSN1 163 aa12.9□□□□□ -0.34
ATG4B-217ENST00000475693 Q8NAQ8 132 aa12.9□□□□□ -0.34
ATG4B-217ENST00000475693 CFAP126Q5VTH2 177 aa12.9□□□□□ -0.34
ATG4B-217ENST00000475693 RASL10AQ92737 203 aa12.9□□□□□ -0.34
ATG4B-217ENST00000475693 SPXQ9BT56 116 aa12.9□□□□□ -0.34
ATG4B-217ENST00000475693 F5H697 171 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 H3BUT2 72 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 ATP5LO75964 103 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 DEFB104AQ8WTQ1 72 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 DPH3P1Q9H4G8 78 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 HHLA3Q9XRX5 114 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 A0A1W2PPM0 123 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 TNFRSF6BO95407 300 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 DAZ2Q13117 558 aaKnown RBP12.89□□□□□ -0.35
ATG4B-217ENST00000475693 PCP2Q8IVA1 136 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 DKK2Q9UBU2 259 aa12.89□□□□□ -0.35
ATG4B-217ENST00000475693 SMIM17P0DL12 118 aa12.88□□□□□ -0.35
ATG4B-217ENST00000475693 NMUP48645 174 aa12.88□□□□□ -0.35
ATG4B-217ENST00000475693 NEGR1Q7Z3B1 354 aa12.88□□□□□ -0.35
ATG4B-217ENST00000475693 P0DMU3 169 aa12.88□□□□□ -0.35
ATG4B-217ENST00000475693 FAM231AP0DMU4 169 aa12.88□□□□□ -0.35
ATG4B-217ENST00000475693 FAM231CP0DMU5 169 aa12.88□□□□□ -0.35
ATG4B-217ENST00000475693 FAM222AQ5U5X8 452 aa12.88□□□□□ -0.35
ATG4B-217ENST00000475693 Q8N8P6 123 aa12.88□□□□□ -0.35
ATG4B-217ENST00000475693 RPL39LQ96EH5 51 aaKnown RBP12.88□□□□□ -0.35
ATG4B-217ENST00000475693 ZNF56Q15929 161 aa12.87□□□□□ -0.35
ATG4B-217ENST00000475693 SMIM13P0DJ93 91 aa12.86□□□□□ -0.35
ATG4B-217ENST00000475693 TRGV2A0A075B6R0 118 aa12.86□□□□□ -0.35
ATG4B-217ENST00000475693 SMIM9A6NGZ8 99 aa12.86□□□□□ -0.35
ATG4B-217ENST00000475693 IGKCP01834 107 aa12.86□□□□□ -0.35
ATG4B-217ENST00000475693 SUMO4Q6EEV6 95 aa12.86□□□□□ -0.35
ATG4B-217ENST00000475693 IGLV2-18A0A075B6J9 118 aa12.85□□□□□ -0.35
ATG4B-217ENST00000475693 FABP2P12104 132 aa12.85□□□□□ -0.35
ATG4B-217ENST00000475693 DPM2O94777 84 aa12.85□□□□□ -0.35
ATG4B-217ENST00000475693 SPCS1Q9Y6A9 102 aa12.85□□□□□ -0.35
ATG4B-217ENST00000475693 RS1O15537 224 aa12.84□□□□□ -0.35
ATG4B-217ENST00000475693 MIFP14174 115 aa12.84□□□□□ -0.35
ATG4B-217ENST00000475693 TM2D2Q9BX73 214 aa12.84□□□□□ -0.35
ATG4B-217ENST00000475693 A8MWV9 139 aa12.83□□□□□ -0.36
ATG4B-217ENST00000475693 PRSS1P07477 247 aa12.83□□□□□ -0.36
ATG4B-217ENST00000475693 NRACQ8N912 160 aa12.83□□□□□ -0.36
ATG4B-217ENST00000475693 C18orf15Q96N68 181 aa12.83□□□□□ -0.36
ATG4B-217ENST00000475693 TAL2Q16559 108 aa12.82□□□□□ -0.36
ATG4B-217ENST00000475693 CHAC1Q9BUX1 264 aa12.82□□□□□ -0.36
ATG4B-217ENST00000475693 PTH2Q96A98 100 aa12.82□□□□□ -0.36
ATG4B-217ENST00000475693 IGKV2D-26A0A0A0MRZ7 120 aa12.81□□□□□ -0.36
ATG4B-217ENST00000475693 A0A0J9YWU9 116 aa12.81□□□□□ -0.36
ATG4B-217ENST00000475693 TRBV25-1A0A075B6N4 114 aa12.81□□□□□ -0.36
ATG4B-217ENST00000475693 TP53TG1Q9Y2A0 90 aa12.81□□□□□ -0.36
ATG4B-217ENST00000475693 M0QY20 66 aa12.8□□□□□ -0.36
ATG4B-217ENST00000475693 LAGE3Q14657 143 aa12.8□□□□□ -0.36
ATG4B-217ENST00000475693 RAB37Q96AX2 223 aa12.8□□□□□ -0.36
ATG4B-217ENST00000475693 TM2D3Q9BRN9 247 aa12.8□□□□□ -0.36
ATG4B-217ENST00000475693 FXYD2P54710 66 aa12.8□□□□□ -0.36
ATG4B-217ENST00000475693 PHLDA1Q8WV24 401 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-217ENST00000475693 TMEM238C9JI98 176 aa12.79□□□□□ -0.36
ATG4B-217ENST00000475693 GCSHP23434 173 aa12.79□□□□□ -0.36
ATG4B-217ENST00000475693 ZC2HC1BQ5TFG8 222 aa12.79□□□□□ -0.36
ATG4B-217ENST00000475693 TRAV4A0A0B4J268 109 aa12.78□□□□□ -0.36
ATG4B-217ENST00000475693 PIK3CD-AS1Q5SR53 167 aa12.78□□□□□ -0.36
ATG4B-217ENST00000475693 CEND1Q8N111 149 aa12.78□□□□□ -0.36
ATG4B-217ENST00000475693 MRAP2Q96G30 205 aa12.78□□□□□ -0.36
ATG4B-217ENST00000475693 STAB2Q8WWQ8 2551 aa12.78□□□□□ -0.36
ATG4B-217ENST00000475693 A0A087WX48 190 aa12.78□□□□□ -0.36
ATG4B-217ENST00000475693 LOC100131303A0A0U1RQF7 123 aa12.78□□□□□ -0.36
ATG4B-217ENST00000475693 PLNP26678 52 aa12.78□□□□□ -0.36
ATG4B-217ENST00000475693 TCTAP57738 103 aa12.78□□□□□ -0.36
ATG4B-217ENST00000475693 LINC00612Q8N6U2 182 aa12.78□□□□□ -0.36
ATG4B-217ENST00000475693 TRAV12-1A0A0B4J245 112 aa12.77□□□□□ -0.36
ATG4B-217ENST00000475693 K7EMI3 77 aa12.77□□□□□ -0.36
ATG4B-217ENST00000475693 CFAP161Q6P656 301 aa12.77□□□□□ -0.36
ATG4B-217ENST00000475693 SPATA25Q9BR10 227 aa12.77□□□□□ -0.36
ATG4B-217ENST00000475693 HTN3P15516 51 aa12.77□□□□□ -0.37
ATG4B-217ENST00000475693 SLC25A29Q8N8R3 303 aa12.77□□□□□ -0.37
ATG4B-217ENST00000475693 DAD1P61803 113 aa12.76□□□□□ -0.37
ATG4B-217ENST00000475693 FHL2Q14192 279 aa12.76□□□□□ -0.37
ATG4B-217ENST00000475693 NAA38Q9BRA0 125 aaKnown RBP12.76□□□□□ -0.37
ATG4B-217ENST00000475693 LYRM9A8MSI8 78 aa12.76□□□□□ -0.37
ATG4B-217ENST00000475693 SPART-AS1P0CW21 52 aa12.76□□□□□ -0.37
ATG4B-217ENST00000475693 MRPL35Q9NZE8 188 aaKnown RBP12.76□□□□□ -0.37
ATG4B-217ENST00000475693 TRGV4A0A0C4DH28 118 aa12.75□□□□□ -0.37
ATG4B-217ENST00000475693 E9PLD3 99 aa12.75□□□□□ -0.37
ATG4B-217ENST00000475693 C12orf74Q32Q52 190 aa12.75□□□□□ -0.37
ATG4B-217ENST00000475693 NANOS2P60321 138 aaKnown RBP12.74□□□□□ -0.37
ATG4B-217ENST00000475693 ZFP2Q6ZN57 461 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms