RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 RRN3P1Q2M238 152 aa11.05□□□□□ -0.64
RPUSD3-215ENST00000475470 TRAV8-6A0A0B4J262 113 aa11.05□□□□□ -0.64
RPUSD3-215ENST00000475470 PAPPA-AS1Q5QFB9 102 aa11.05□□□□□ -0.64
RPUSD3-215ENST00000475470 SPATA3Q8NHX4 192 aa11.05□□□□□ -0.64
RPUSD3-215ENST00000475470 ZNF479Q96JC4 524 aa11.05□□□□□ -0.64
RPUSD3-215ENST00000475470 CBY1Q9Y3M2 126 aa11.05□□□□□ -0.64
RPUSD3-215ENST00000475470 OPRPNQ99935 248 aaPredicted RBP11.04□□□□□ -0.64
RPUSD3-215ENST00000475470 IGLV4-69A0A075B6H9 119 aa11.03□□□□□ -0.64
RPUSD3-215ENST00000475470 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
RPUSD3-215ENST00000475470 PLAC8L1A1L4L8 177 aa11.03□□□□□ -0.64
RPUSD3-215ENST00000475470 EMP1P54849 157 aa11.03□□□□□ -0.64
RPUSD3-215ENST00000475470 C11orf86A6NJI1 115 aa11.03□□□□□ -0.64
RPUSD3-215ENST00000475470 HSD52Q0P140 79 aa11.03□□□□□ -0.64
RPUSD3-215ENST00000475470 PHLDA1Q8WV24 401 aaPredicted RBP11.03□□□□□ -0.64
RPUSD3-215ENST00000475470 NOTCH3Q9UM47 2321 aa11.02□□□□□ -0.64
RPUSD3-215ENST00000475470 IGHV3-38A0A0C4DH36 116 aa11.02□□□□□ -0.65
RPUSD3-215ENST00000475470 OR11H2Q8NH07 326 aa11.02□□□□□ -0.65
RPUSD3-215ENST00000475470 COTL1Q14019 142 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 MAPKAPK5-AS1Q8N8E1 139 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 TRBV25-1A0A075B6N4 114 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 TRGV2A0A075B6R0 118 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 GAGE12BA1L429 117 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 GAGE7O76087 117 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 GAGE12FP0CL80 117 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 GAGE12GP0CL81 117 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 GAGE12IP0CL82 117 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 C21orf62-AS1Q17RA5 79 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 ZNRF2Q8NHG8 242 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 VCX2Q9H322 139 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 HIGD1BQ9P298 99 aa11.01□□□□□ -0.65
RPUSD3-215ENST00000475470 IGLV4-3A0A075B6K6 122 aa11□□□□□ -0.65
RPUSD3-215ENST00000475470 E9PLD3 99 aa11□□□□□ -0.65
RPUSD3-215ENST00000475470 K7EP13 123 aa11□□□□□ -0.65
RPUSD3-215ENST00000475470 PYGO1Q9Y3Y4 419 aa11□□□□□ -0.65
RPUSD3-215ENST00000475470 K7EQD1 137 aa11□□□□□ -0.65
RPUSD3-215ENST00000475470 OVOL2Q9BRP0 275 aa11□□□□□ -0.65
RPUSD3-215ENST00000475470 CHCHD7Q9BUK0 85 aa11□□□□□ -0.65
RPUSD3-215ENST00000475470 TRBV7-3A0A075B6L6 115 aa10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 HERVK_113P61574 105 aa10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 SEC11AP67812 179 aa10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 NAA38Q9BRA0 125 aaKnown RBP10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 TRBV10-1A0A0K0K1A3 114 aa10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 RBX1P62877 108 aa10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 RPL36AP83881 106 aaKnown RBP10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 TMEM170BQ5T4T1 132 aa10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 RPL36ALQ969Q0 106 aaKnown RBP10.99□□□□□ -0.65
RPUSD3-215ENST00000475470 RNF151Q2KHN1 245 aa10.98□□□□□ -0.65
RPUSD3-215ENST00000475470 SLC25A29Q8N8R3 303 aa10.98□□□□□ -0.65
RPUSD3-215ENST00000475470 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.97□□□□□ -0.65
RPUSD3-215ENST00000475470 MYMXA0A1B0GTQ4 84 aa10.97□□□□□ -0.65
RPUSD3-215ENST00000475470 IGKV2-29A2NJV5 120 aaPredicted RBP10.97□□□□□ -0.65
RPUSD3-215ENST00000475470 CEMP1Q6PRD7 247 aaPredicted RBP10.97□□□□□ -0.65
RPUSD3-215ENST00000475470 NFE4Q86UQ8 179 aa10.97□□□□□ -0.65
RPUSD3-215ENST00000475470 RAB37Q96AX2 223 aa10.97□□□□□ -0.65
RPUSD3-215ENST00000475470 SPANXA1Q9NS26 97 aa10.97□□□□□ -0.65
RPUSD3-215ENST00000475470 A6NDN8 102 aa10.96□□□□□ -0.65
RPUSD3-215ENST00000475470 CIDEAO60543 219 aa10.96□□□□□ -0.65
RPUSD3-215ENST00000475470 UBE2D4Q9Y2X8 147 aa10.96□□□□□ -0.65
RPUSD3-215ENST00000475470 CRYBA4P53673 196 aa10.96□□□□□ -0.66
RPUSD3-215ENST00000475470 GAGE12JA6NER3 117 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 PCP4P48539 62 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 GAGE4Q13068 117 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 GAGE5Q13069 117 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 GAGE13Q4V321 117 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 DAZ4Q86SG3 579 aaKnown RBP10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 AMELXQ99217 191 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 DAZ3Q9NR90 486 aaKnown RBP10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 TENM1Q9UKZ4 2725 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 TRGV4A0A0C4DH28 118 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 H3BUT2 72 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 GCSHP23434 173 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 FAM104AQ969W3 186 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 F8P00451 2351 aa10.95□□□□□ -0.66
RPUSD3-215ENST00000475470 VWFP04275 2813 aa10.94□□□□□ -0.66
RPUSD3-215ENST00000475470 A0A0J9YXV3 536 aa10.94□□□□□ -0.66
RPUSD3-215ENST00000475470 ZNF815PA8K554 130 aa10.94□□□□□ -0.66
RPUSD3-215ENST00000475470 WFDC9Q8NEX5 89 aa10.94□□□□□ -0.66
RPUSD3-215ENST00000475470 C9orf118A6NHY6 69 aa10.94□□□□□ -0.66
RPUSD3-215ENST00000475470 H3BRM9 83 aa10.94□□□□□ -0.66
RPUSD3-215ENST00000475470 UBE2D3P61077 147 aa10.94□□□□□ -0.66
RPUSD3-215ENST00000475470 UBE2D2P62837 147 aa10.94□□□□□ -0.66
RPUSD3-215ENST00000475470 RNASE13Q5GAN3 156 aaKnown RBP10.94□□□□□ -0.66
RPUSD3-215ENST00000475470 TRBV6-4A0A1B0GX49 114 aa10.93□□□□□ -0.66
RPUSD3-215ENST00000475470 GAGE10A6NGK3 116 aa10.93□□□□□ -0.66
RPUSD3-215ENST00000475470 TEP1Q99973 2627 aaKnown RBP10.93□□□□□ -0.66
RPUSD3-215ENST00000475470 ATRQ13535 2644 aa10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 SMIM9A6NGZ8 99 aa10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 DGAT2L7PQ6IED9 249 aa10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 FLNBO75369 2602 aaKnown RBP10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 DEFB130BP0DP73 79 aa10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 DEFB130AP0DP74 79 aa10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 ZNF22P17026 224 aaPredicted RBP10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 TAL2Q16559 108 aa10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 CEND1Q8N111 149 aa10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 HIST1H4GQ99525 98 aa10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 X6R8D5 127 aa10.92□□□□□ -0.66
RPUSD3-215ENST00000475470 TMEM223A0PJW6 202 aa10.91□□□□□ -0.66
RPUSD3-215ENST00000475470 APOC4P55056 127 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms