RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 OVOL2Q9BRP0 275 aa13.1□□□□□ -0.31
SEC61A2-213ENST00000475268 CST9LQ9H4G1 147 aa13.1□□□□□ -0.31
SEC61A2-213ENST00000475268 MPV17L2Q567V2 206 aa13.09□□□□□ -0.31
SEC61A2-213ENST00000475268 TRRAPQ9Y4A5 3859 aa13.09□□□□□ -0.31
SEC61A2-213ENST00000475268 ZNRF2Q8NHG8 242 aa13.08□□□□□ -0.31
SEC61A2-213ENST00000475268 TTTY13Q9BZ97 58 aa13.08□□□□□ -0.32
SEC61A2-213ENST00000475268 ZMAT5Q9UDW3 170 aaKnown RBP13.08□□□□□ -0.32
SEC61A2-213ENST00000475268 CYSRT1A8MQ03 144 aa13.07□□□□□ -0.32
SEC61A2-213ENST00000475268 K7EQD1 137 aa13.07□□□□□ -0.32
SEC61A2-213ENST00000475268 DLEU1O43261 78 aa13.07□□□□□ -0.32
SEC61A2-213ENST00000475268 COL5A1-AS1Q5SY13 56 aa13.07□□□□□ -0.32
SEC61A2-213ENST00000475268 BAHCC1Q9P281 2608 aa13.07□□□□□ -0.32
SEC61A2-213ENST00000475268 SLC25A29Q8N8R3 303 aa13.07□□□□□ -0.32
SEC61A2-213ENST00000475268 IGLV4-69A0A075B6H9 119 aa13.06□□□□□ -0.32
SEC61A2-213ENST00000475268 TRBV7-3A0A075B6L6 115 aa13.06□□□□□ -0.32
SEC61A2-213ENST00000475268 COTL1Q14019 142 aa13.06□□□□□ -0.32
SEC61A2-213ENST00000475268 CHCHD7Q9BUK0 85 aa13.05□□□□□ -0.32
SEC61A2-213ENST00000475268 IGLV4-3A0A075B6K6 122 aa13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 TRAV8-6A0A0B4J262 113 aa13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 TRBV10-1A0A0K0K1A3 114 aa13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 C11orf86A6NJI1 115 aa13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 RPL36AP83881 106 aaKnown RBP13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 C12orf54Q6X4T0 127 aa13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 RPL36ALQ969Q0 106 aaKnown RBP13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 IGKV2-29A2NJV5 120 aaPredicted RBP13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 TMEM97Q5BJF2 176 aa13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 CEMP1Q6PRD7 247 aaPredicted RBP13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 X6R8D5 127 aa13.04□□□□□ -0.32
SEC61A2-213ENST00000475268 SIVA1O15304 175 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 PAPPA-AS1Q5QFB9 102 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 BVES-AS1Q5T3Y7 98 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 VCX2Q9H322 139 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 PYGO1Q9Y3Y4 419 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 GAGE12JA6NER3 117 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 WIPF1O43516 503 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 GAGE1Q13065 139 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 GAGE4Q13068 117 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 GAGE5Q13069 117 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 GAGE13Q4V321 117 aa13.03□□□□□ -0.32
SEC61A2-213ENST00000475268 TRGV4A0A0C4DH28 118 aa13.02□□□□□ -0.33
SEC61A2-213ENST00000475268 DEFB130BP0DP73 79 aa13.02□□□□□ -0.33
SEC61A2-213ENST00000475268 DEFB130AP0DP74 79 aa13.02□□□□□ -0.33
SEC61A2-213ENST00000475268 APOC4P55056 127 aa13.02□□□□□ -0.33
SEC61A2-213ENST00000475268 DEFB135Q30KP9 77 aa13.02□□□□□ -0.33
SEC61A2-213ENST00000475268 C3orf56Q8N813 242 aa13.02□□□□□ -0.33
SEC61A2-213ENST00000475268 MAPKAPK5-AS1Q8N8E1 139 aa13.01□□□□□ -0.33
SEC61A2-213ENST00000475268 KIR2DL5BQ8NHK3 375 aa13.01□□□□□ -0.33
SEC61A2-213ENST00000475268 SMIM9A6NGZ8 99 aa13.01□□□□□ -0.33
SEC61A2-213ENST00000475268 CIDEAO60543 219 aa13.01□□□□□ -0.33
SEC61A2-213ENST00000475268 OR11H2Q8NH07 326 aa13.01□□□□□ -0.33
SEC61A2-213ENST00000475268 UBE2D4Q9Y2X8 147 aa13□□□□□ -0.33
SEC61A2-213ENST00000475268 NBEAL2Q6ZNJ1 2754 aa13□□□□□ -0.33
SEC61A2-213ENST00000475268 UBE2D3P61077 147 aa13□□□□□ -0.33
SEC61A2-213ENST00000475268 UBE2D2P62837 147 aa13□□□□□ -0.33
SEC61A2-213ENST00000475268 TMEM170BQ5T4T1 132 aa13□□□□□ -0.33
SEC61A2-213ENST00000475268 DAZ4Q86SG3 579 aaKnown RBP13□□□□□ -0.33
SEC61A2-213ENST00000475268 FAM104AQ969W3 186 aa13□□□□□ -0.33
SEC61A2-213ENST00000475268 DAZ3Q9NR90 486 aaKnown RBP13□□□□□ -0.33
SEC61A2-213ENST00000475268 FBN1P35555 2871 aaKnown RBP13□□□□□ -0.33
SEC61A2-213ENST00000475268 TRBV6-4A0A1B0GX49 114 aa12.99□□□□□ -0.33
SEC61A2-213ENST00000475268 E9PLD3 99 aa12.99□□□□□ -0.33
SEC61A2-213ENST00000475268 RNASE13Q5GAN3 156 aaKnown RBP12.99□□□□□ -0.33
SEC61A2-213ENST00000475268 PRADC1Q9BSG0 188 aa12.99□□□□□ -0.33
SEC61A2-213ENST00000475268 SPANXA1Q9NS26 97 aa12.99□□□□□ -0.33
SEC61A2-213ENST00000475268 TRBV25-1A0A075B6N4 114 aa12.98□□□□□ -0.33
SEC61A2-213ENST00000475268 LOC100131303A0A0U1RQF7 123 aa12.98□□□□□ -0.33
SEC61A2-213ENST00000475268 FHL2Q14192 279 aa12.98□□□□□ -0.33
SEC61A2-213ENST00000475268 OXLD1Q5BKU9 147 aa12.98□□□□□ -0.33
SEC61A2-213ENST00000475268 CHAC1Q9BUX1 264 aa12.98□□□□□ -0.33
SEC61A2-213ENST00000475268 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
SEC61A2-213ENST00000475268 PRIMA1Q86XR5 153 aa12.97□□□□□ -0.33
SEC61A2-213ENST00000475268 AMELXQ99217 191 aa12.97□□□□□ -0.33
SEC61A2-213ENST00000475268 A0A0J9YXV3 536 aa12.97□□□□□ -0.33
SEC61A2-213ENST00000475268 ZNF25P17030 456 aaPredicted RBP12.97□□□□□ -0.33
SEC61A2-213ENST00000475268 HERVK_113P61574 105 aa12.97□□□□□ -0.33
SEC61A2-213ENST00000475268 HSD52Q0P140 79 aa12.97□□□□□ -0.33
SEC61A2-213ENST00000475268 NFE4Q86UQ8 179 aa12.97□□□□□ -0.33
SEC61A2-213ENST00000475268 NTM-AS1Q6ZSK4 140 aa12.96□□□□□ -0.33
SEC61A2-213ENST00000475268 HIGD1BQ9P298 99 aa12.96□□□□□ -0.33
SEC61A2-213ENST00000475268 NPSP0C0P6 89 aa12.96□□□□□ -0.34
SEC61A2-213ENST00000475268 SHISA2Q6UWI4 295 aa12.96□□□□□ -0.34
SEC61A2-213ENST00000475268 LURAP1LQ8IV03 231 aa12.96□□□□□ -0.34
SEC61A2-213ENST00000475268 LINC00612Q8N6U2 182 aa12.96□□□□□ -0.34
SEC61A2-213ENST00000475268 DEFB4AO15263 64 aa12.95□□□□□ -0.34
SEC61A2-213ENST00000475268 CRYBA4P53673 196 aa12.95□□□□□ -0.34
SEC61A2-213ENST00000475268 Q6ZUT4 128 aa12.95□□□□□ -0.34
SEC61A2-213ENST00000475268 MYMXA0A1B0GTQ4 84 aa12.94□□□□□ -0.34
SEC61A2-213ENST00000475268 FAM222AQ5U5X8 452 aa12.94□□□□□ -0.34
SEC61A2-213ENST00000475268 DGAT2L7PQ6IED9 249 aa12.94□□□□□ -0.34
SEC61A2-213ENST00000475268 Q6ZVH6 145 aa12.94□□□□□ -0.34
SEC61A2-213ENST00000475268 STAB1Q9NY15 2570 aa12.93□□□□□ -0.34
SEC61A2-213ENST00000475268 LINC00694P0DN24 101 aa12.93□□□□□ -0.34
SEC61A2-213ENST00000475268 IGHV4-28A0A0C4DH34 117 aa12.92□□□□□ -0.34
SEC61A2-213ENST00000475268 ZNF22P17026 224 aaPredicted RBP12.92□□□□□ -0.34
SEC61A2-213ENST00000475268 KRTAP10-11P60412 298 aa12.92□□□□□ -0.34
SEC61A2-213ENST00000475268 ORAOV1Q8WV07 137 aa12.92□□□□□ -0.34
SEC61A2-213ENST00000475268 ZNF815PA8K554 130 aa12.91□□□□□ -0.34
SEC61A2-213ENST00000475268 LYRM9A8MSI8 78 aa12.91□□□□□ -0.34
SEC61A2-213ENST00000475268 TIMM21Q9BVV7 248 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms