RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 RBX1P62877 108 aa8.02□□□□□ -1.13
SSR1-205ENST00000475213 LINC01620Q4KN68 170 aa8.02□□□□□ -1.13
SSR1-205ENST00000475213 RASL11AQ6T310 242 aa8.02□□□□□ -1.13
SSR1-205ENST00000475213 CNFNQ9BYD5 112 aa8.02□□□□□ -1.13
SSR1-205ENST00000475213 TWIST1Q15672 202 aa8.01□□□□□ -1.13
SSR1-205ENST00000475213 MIAQ16674 131 aa8.01□□□□□ -1.13
SSR1-205ENST00000475213 NIT2Q9NQR4 276 aa8.01□□□□□ -1.13
SSR1-205ENST00000475213 PRR34Q9NV39 138 aa8.01□□□□□ -1.13
SSR1-205ENST00000475213 FLG2Q5D862 2391 aaPredicted RBP8.01□□□□□ -1.13
SSR1-205ENST00000475213 C14orf177Q52M58 125 aa8□□□□□ -1.13
SSR1-205ENST00000475213 CLPSL2Q6UWE3 100 aa8□□□□□ -1.13
SSR1-205ENST00000475213 LINC00269Q8N2A0 174 aa8□□□□□ -1.13
SSR1-205ENST00000475213 GTSF1Q8WW33 167 aa8□□□□□ -1.13
SSR1-205ENST00000475213 GATCO43716 136 aaKnown RBP7.99□□□□□ -1.13
SSR1-205ENST00000475213 HLA-DQA1P01909 254 aa7.99□□□□□ -1.13
SSR1-205ENST00000475213 CEBPGP53567 150 aa7.99□□□□□ -1.13
SSR1-205ENST00000475213 DEFB104AQ8WTQ1 72 aa7.99□□□□□ -1.13
SSR1-205ENST00000475213 PGLYRP4Q96LB8 373 aa7.99□□□□□ -1.13
SSR1-205ENST00000475213 TMEM243Q9BU79 118 aa7.99□□□□□ -1.13
SSR1-205ENST00000475213 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
SSR1-205ENST00000475213 TRAV26-2A0A0B4J265 109 aa7.98□□□□□ -1.13
SSR1-205ENST00000475213 A0A1B0GVG6 124 aa7.98□□□□□ -1.13
SSR1-205ENST00000475213 USP17L23D6RBM5 183 aa7.98□□□□□ -1.13
SSR1-205ENST00000475213 KRTAP26-1Q6PEX3 210 aa7.98□□□□□ -1.13
SSR1-205ENST00000475213 FAM231DQ6ZW35 169 aa7.98□□□□□ -1.13
SSR1-205ENST00000475213 GATD1Q8NB37 220 aa7.98□□□□□ -1.13
SSR1-205ENST00000475213 C20orf203Q8NBC4 194 aa7.98□□□□□ -1.13
SSR1-205ENST00000475213 IGLV4-60A0A075B6I1 120 aa7.97□□□□□ -1.13
SSR1-205ENST00000475213 A0A1B0GUV1 79 aa7.97□□□□□ -1.13
SSR1-205ENST00000475213 A8MWL6 223 aa7.97□□□□□ -1.13
SSR1-205ENST00000475213 FOXA3P55318 350 aaPredicted RBP7.97□□□□□ -1.13
SSR1-205ENST00000475213 REG3AQ06141 175 aa7.97□□□□□ -1.13
SSR1-205ENST00000475213 EIF5A2Q9GZV4 153 aaKnown RBP7.97□□□□□ -1.13
SSR1-205ENST00000475213 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
SSR1-205ENST00000475213 DMBT1Q9UGM3 2413 aaPredicted RBP7.97□□□□□ -1.13
SSR1-205ENST00000475213 NDUFS6O75380 124 aaKnown RBP7.96□□□□□ -1.14
SSR1-205ENST00000475213 COTL1Q14019 142 aa7.96□□□□□ -1.14
SSR1-205ENST00000475213 SCXQ7RTU7 201 aa7.96□□□□□ -1.14
SSR1-205ENST00000475213 SMIM15Q7Z3B0 74 aa7.96□□□□□ -1.14
SSR1-205ENST00000475213 FAM210AQ96ND0 272 aa7.96□□□□□ -1.14
SSR1-205ENST00000475213 SMIM7Q9BQ49 75 aa7.96□□□□□ -1.14
SSR1-205ENST00000475213 GFRA4Q9GZZ7 299 aa7.96□□□□□ -1.14
SSR1-205ENST00000475213 IGLV10-54A0A075B6I4 117 aa7.95□□□□□ -1.14
SSR1-205ENST00000475213 UBE2L6O14933 153 aa7.95□□□□□ -1.14
SSR1-205ENST00000475213 PRSS1P07477 247 aa7.95□□□□□ -1.14
SSR1-205ENST00000475213 AMTP48728 403 aa7.95□□□□□ -1.14
SSR1-205ENST00000475213 CT83Q5H943 113 aa7.95□□□□□ -1.14
SSR1-205ENST00000475213 LINC01551Q86U37 167 aa7.95□□□□□ -1.14
SSR1-205ENST00000475213 RPL39LQ96EH5 51 aaKnown RBP7.95□□□□□ -1.14
SSR1-205ENST00000475213 CHAC1Q9BUX1 264 aa7.95□□□□□ -1.14
SSR1-205ENST00000475213 HERC1Q15751 4861 aa7.95□□□□□ -1.14
SSR1-205ENST00000475213 TRAV8-4A0A0B4J246 113 aa7.94□□□□□ -1.14
SSR1-205ENST00000475213 ZNF727A8MUV8 499 aa7.94□□□□□ -1.14
SSR1-205ENST00000475213 SRP19P09132 144 aaKnown RBP7.94□□□□□ -1.14
SSR1-205ENST00000475213 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
SSR1-205ENST00000475213 PLA2G1BP04054 148 aaKnown RBP7.93□□□□□ -1.14
SSR1-205ENST00000475213 DGAT2L7PQ6IED9 249 aa7.93□□□□□ -1.14
SSR1-205ENST00000475213 TEX261Q6UWH6 196 aa7.93□□□□□ -1.14
SSR1-205ENST00000475213 CIRBP-AS1Q8TBR5 109 aa7.93□□□□□ -1.14
SSR1-205ENST00000475213 TSKUQ8WUA8 353 aa7.93□□□□□ -1.14
SSR1-205ENST00000475213 SDHAF1A6NFY7 115 aa7.92□□□□□ -1.14
SSR1-205ENST00000475213 HIGD1CA8MV81 97 aa7.92□□□□□ -1.14
SSR1-205ENST00000475213 NCR2O95944 276 aa7.92□□□□□ -1.14
SSR1-205ENST00000475213 BORCS7Q96B45 105 aa7.92□□□□□ -1.14
SSR1-205ENST00000475213 OSTCQ9NRP0 149 aa7.92□□□□□ -1.14
SSR1-205ENST00000475213 A0A1B0GUT8 65 aa7.91□□□□□ -1.14
SSR1-205ENST00000475213 FAM231BA6NCW3 169 aa7.91□□□□□ -1.14
SSR1-205ENST00000475213 GAS8-AS1O95177 125 aa7.91□□□□□ -1.14
SSR1-205ENST00000475213 C9orf163Q8N9P6 203 aa7.91□□□□□ -1.14
SSR1-205ENST00000475213 CLRN3Q8NCR9 226 aa7.91□□□□□ -1.14
SSR1-205ENST00000475213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.9□□□□□ -1.14
SSR1-205ENST00000475213 TRBV6-5A0A0K0K1A5 114 aa7.9□□□□□ -1.14
SSR1-205ENST00000475213 IGKV2-29A2NJV5 120 aaPredicted RBP7.9□□□□□ -1.14
SSR1-205ENST00000475213 APCSP02743 223 aa7.9□□□□□ -1.14
SSR1-205ENST00000475213 TMEM191AQ9H0A3 160 aa7.9□□□□□ -1.14
SSR1-205ENST00000475213 V9GYV3 84 aa7.9□□□□□ -1.14
SSR1-205ENST00000475213 IGKV3OR2-268A0A0C4DH90 116 aa7.89□□□□□ -1.15
SSR1-205ENST00000475213 hDV102S1A0JD36 115 aa7.89□□□□□ -1.15
SSR1-205ENST00000475213 H7C423 109 aa7.89□□□□□ -1.15
SSR1-205ENST00000475213 I3L3M4 83 aa7.89□□□□□ -1.15
SSR1-205ENST00000475213 PMCHP20382 165 aa7.89□□□□□ -1.15
SSR1-205ENST00000475213 TMEM241Q24JQ0 296 aa7.89□□□□□ -1.15
SSR1-205ENST00000475213 AMMECR1LQ6DCA0 310 aa7.89□□□□□ -1.15
SSR1-205ENST00000475213 ISOC2Q96AB3 205 aa7.89□□□□□ -1.15
SSR1-205ENST00000475213 RNF185Q96GF1 192 aa7.89□□□□□ -1.15
SSR1-205ENST00000475213 C9JQL5 133 aa7.88□□□□□ -1.15
SSR1-205ENST00000475213 FGF6P10767 208 aa7.88□□□□□ -1.15
SSR1-205ENST00000475213 RAB4AP20338 218 aa7.88□□□□□ -1.15
SSR1-205ENST00000475213 CNBPP62633 177 aaKnown RBP7.88□□□□□ -1.15
SSR1-205ENST00000475213 RPL23P62829 140 aaKnown RBP7.88□□□□□ -1.15
SSR1-205ENST00000475213 FAM74A3Q4VXF1 159 aa7.88□□□□□ -1.15
SSR1-205ENST00000475213 RNASEKQ6P5S7 137 aaKnown RBP7.88□□□□□ -1.15
SSR1-205ENST00000475213 NUP35Q8NFH5 326 aa7.88□□□□□ -1.15
SSR1-205ENST00000475213 ST20Q9HBF5 79 aa7.88□□□□□ -1.15
SSR1-205ENST00000475213 GAGE12HA6NDE8 117 aa7.87□□□□□ -1.15
SSR1-205ENST00000475213 TSHBP01222 138 aa7.87□□□□□ -1.15
SSR1-205ENST00000475213 SLPIP03973 132 aa7.87□□□□□ -1.15
SSR1-205ENST00000475213 RPS10P46783 165 aaKnown RBP7.87□□□□□ -1.15
SSR1-205ENST00000475213 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
SSR1-205ENST00000475213 SRSF3P84103 164 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms