RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 TMEM250H0YL14 139 aa6.21□□□□□ -1.42
PDPN-204ENST00000475043 CTRLP40313 264 aa6.21□□□□□ -1.42
PDPN-204ENST00000475043 SRSF3P84103 164 aaKnown RBP6.21□□□□□ -1.42
PDPN-204ENST00000475043 GAGE6Q13070 117 aa6.21□□□□□ -1.42
PDPN-204ENST00000475043 RASL11AQ6T310 242 aa6.21□□□□□ -1.42
PDPN-204ENST00000475043 ATRAIDQ6UW56 229 aa6.21□□□□□ -1.42
PDPN-204ENST00000475043 CLPSL2Q6UWE3 100 aa6.21□□□□□ -1.42
PDPN-204ENST00000475043 ENHOQ6UWT2 76 aa6.21□□□□□ -1.42
PDPN-204ENST00000475043 DEFB104AQ8WTQ1 72 aa6.21□□□□□ -1.42
PDPN-204ENST00000475043 EIF5A2Q9GZV4 153 aaKnown RBP6.21□□□□□ -1.42
PDPN-204ENST00000475043 IGHV1-24A0A0C4DH33 117 aa6.2□□□□□ -1.42
PDPN-204ENST00000475043 GATCO43716 136 aaKnown RBP6.2□□□□□ -1.42
PDPN-204ENST00000475043 HLA-DQA1P01909 254 aa6.2□□□□□ -1.42
PDPN-204ENST00000475043 LINC01620Q4KN68 170 aa6.2□□□□□ -1.42
PDPN-204ENST00000475043 WDR73Q6P4I2 378 aa6.2□□□□□ -1.42
PDPN-204ENST00000475043 LINC00269Q8N2A0 174 aa6.2□□□□□ -1.42
PDPN-204ENST00000475043 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
PDPN-204ENST00000475043 NIT2Q9NQR4 276 aa6.2□□□□□ -1.42
PDPN-204ENST00000475043 FAM30AQ9NZY2 134 aa6.2□□□□□ -1.42
PDPN-204ENST00000475043 ABCA13Q86UQ4 5058 aa6.19□□□□□ -1.42
PDPN-204ENST00000475043 A0A1B0GVG6 124 aa6.19□□□□□ -1.42
PDPN-204ENST00000475043 RBX1P62877 108 aa6.19□□□□□ -1.42
PDPN-204ENST00000475043 MIAQ16674 131 aa6.19□□□□□ -1.42
PDPN-204ENST00000475043 IQCJQ1A5X6 159 aa6.19□□□□□ -1.42
PDPN-204ENST00000475043 CFAP161Q6P656 301 aa6.19□□□□□ -1.42
PDPN-204ENST00000475043 SMIM15Q7Z3B0 74 aa6.19□□□□□ -1.42
PDPN-204ENST00000475043 LYPD6BQ8NI32 183 aa6.19□□□□□ -1.42
PDPN-204ENST00000475043 TRAV26-2A0A0B4J265 109 aa6.18□□□□□ -1.42
PDPN-204ENST00000475043 A8MWL6 223 aa6.18□□□□□ -1.42
PDPN-204ENST00000475043 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
PDPN-204ENST00000475043 C14orf177Q52M58 125 aa6.18□□□□□ -1.42
PDPN-204ENST00000475043 GTSF1Q8WW33 167 aa6.18□□□□□ -1.42
PDPN-204ENST00000475043 PGLYRP4Q96LB8 373 aa6.18□□□□□ -1.42
PDPN-204ENST00000475043 SMIM7Q9BQ49 75 aa6.18□□□□□ -1.42
PDPN-204ENST00000475043 TMEM243Q9BU79 118 aa6.18□□□□□ -1.42
PDPN-204ENST00000475043 CNFNQ9BYD5 112 aa6.18□□□□□ -1.42
PDPN-204ENST00000475043 IGLV10-54A0A075B6I4 117 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 ZNF727A8MUV8 499 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 UBE2L6O14933 153 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 AMTP48728 403 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 FOXA3P55318 350 aaPredicted RBP6.17□□□□□ -1.42
PDPN-204ENST00000475043 REG3AQ06141 175 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 COTL1Q14019 142 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 FAM231DQ6ZW35 169 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 GATD1Q8NB37 220 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 BORCS7Q96B45 105 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 FAM210AQ96ND0 272 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 PRR34Q9NV39 138 aa6.17□□□□□ -1.42
PDPN-204ENST00000475043 USP17L23D6RBM5 183 aa6.16□□□□□ -1.42
PDPN-204ENST00000475043 RPL39LQ96EH5 51 aaKnown RBP6.16□□□□□ -1.42
PDPN-204ENST00000475043 IGLV4-60A0A075B6I1 120 aa6.15□□□□□ -1.42
PDPN-204ENST00000475043 SRP19P09132 144 aaKnown RBP6.15□□□□□ -1.42
PDPN-204ENST00000475043 C21orf62-AS1Q17RA5 79 aa6.15□□□□□ -1.42
PDPN-204ENST00000475043 CT83Q5H943 113 aa6.15□□□□□ -1.42
PDPN-204ENST00000475043 TEX261Q6UWH6 196 aa6.15□□□□□ -1.42
PDPN-204ENST00000475043 Q6ZSA8 131 aa6.15□□□□□ -1.42
PDPN-204ENST00000475043 LINC01551Q86U37 167 aa6.15□□□□□ -1.42
PDPN-204ENST00000475043 C20orf203Q8NBC4 194 aa6.15□□□□□ -1.42
PDPN-204ENST00000475043 A0A1B0GUV1 79 aa6.14□□□□□ -1.43
PDPN-204ENST00000475043 SCXQ7RTU7 201 aa6.14□□□□□ -1.43
PDPN-204ENST00000475043 TRAV8-4A0A0B4J246 113 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 IGKV3OR2-268A0A0C4DH90 116 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 A0A1B0GUT8 65 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 SDHAF1A6NFY7 115 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 HIGD1CA8MV81 97 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 NDUFS6O75380 124 aaKnown RBP6.13□□□□□ -1.43
PDPN-204ENST00000475043 PRSS1P07477 247 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 AMMECR1LQ6DCA0 310 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 KRTAP26-1Q6PEX3 210 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 TSKUQ8WUA8 353 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 GFRA4Q9GZZ7 299 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 OSTCQ9NRP0 149 aa6.13□□□□□ -1.43
PDPN-204ENST00000475043 NCR2O95944 276 aa6.12□□□□□ -1.43
PDPN-204ENST00000475043 APCSP02743 223 aa6.12□□□□□ -1.43
PDPN-204ENST00000475043 PLA2G1BP04054 148 aaKnown RBP6.12□□□□□ -1.43
PDPN-204ENST00000475043 PMCHP20382 165 aa6.12□□□□□ -1.43
PDPN-204ENST00000475043 TMEM241Q24JQ0 296 aa6.12□□□□□ -1.43
PDPN-204ENST00000475043 DGAT2L7PQ6IED9 249 aa6.12□□□□□ -1.43
PDPN-204ENST00000475043 RNASEKQ6P5S7 137 aaKnown RBP6.12□□□□□ -1.43
PDPN-204ENST00000475043 CHAC1Q9BUX1 264 aa6.12□□□□□ -1.43
PDPN-204ENST00000475043 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.11□□□□□ -1.43
PDPN-204ENST00000475043 hDV102S1A0JD36 115 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 IGKV2-29A2NJV5 120 aaPredicted RBP6.11□□□□□ -1.43
PDPN-204ENST00000475043 FAM231BA6NCW3 169 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 I3L3M4 83 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 ADIRFQ15847 76 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 FAM74A3Q4VXF1 159 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 CLRN3Q8NCR9 226 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 CIRBP-AS1Q8TBR5 109 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 ISOC2Q96AB3 205 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 TMEM191AQ9H0A3 160 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 ST20Q9HBF5 79 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 AP5S1Q9NUS5 200 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 V9GYV3 84 aa6.11□□□□□ -1.43
PDPN-204ENST00000475043 C9JQL5 133 aa6.1□□□□□ -1.43
PDPN-204ENST00000475043 GAS8-AS1O95177 125 aa6.1□□□□□ -1.43
PDPN-204ENST00000475043 RPL23P62829 140 aaKnown RBP6.1□□□□□ -1.43
PDPN-204ENST00000475043 RIGQ13278 110 aa6.1□□□□□ -1.43
PDPN-204ENST00000475043 PEA15Q15121 130 aa6.1□□□□□ -1.43
PDPN-204ENST00000475043 AMN1Q8IY45 258 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms