RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 ORMDL2Q53FV1 153 aa14.16□□□□□ -0.14
NPM3-204ENST00000474993 BAGE3Q86Y29 109 aa14.16□□□□□ -0.14
NPM3-204ENST00000474993 TMEM18Q96B42 140 aa14.16□□□□□ -0.14
NPM3-204ENST00000474993 TMEM243Q9BU79 118 aa14.16□□□□□ -0.14
NPM3-204ENST00000474993 SMAGPQ0VAQ4 97 aa14.15□□□□□ -0.14
NPM3-204ENST00000474993 LAGE3Q14657 143 aa14.15□□□□□ -0.14
NPM3-204ENST00000474993 NTM-AS1Q6ZSK4 140 aa14.15□□□□□ -0.14
NPM3-204ENST00000474993 LINC00614P0C842 121 aa14.14□□□□□ -0.15
NPM3-204ENST00000474993 CHCHD5Q9BSY4 110 aa14.14□□□□□ -0.15
NPM3-204ENST00000474993 LINC00588Q9Y4M8 146 aa14.14□□□□□ -0.15
NPM3-204ENST00000474993 H7C423 109 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 UBE2L6O14933 153 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST1H2BKO60814 126 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST1H2BJP06899 126 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST1H2BOP23527 126 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST1H2BBP33778 126 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST1H2BDP58876 126 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST1H2BCP62807 126 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST2H2BEQ16778 126 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.13□□□□□ -0.15
NPM3-204ENST00000474993 NIT1Q86X76 327 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST1H2BHQ93079 126 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 CHCHD1Q96BP2 118 aaKnown RBP14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST1H2BNQ99877 126 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 HIST1H2BMQ99879 126 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 UPK3BQ9BT76 320 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 AP5S1Q9NUS5 200 aa14.13□□□□□ -0.15
NPM3-204ENST00000474993 LINC01546A6NGU7 62 aa14.12□□□□□ -0.15
NPM3-204ENST00000474993 LGALS9CQ6DKI2 356 aa14.12□□□□□ -0.15
NPM3-204ENST00000474993 DEFB104AQ8WTQ1 72 aa14.12□□□□□ -0.15
NPM3-204ENST00000474993 LINC01549A6NIU2 74 aa14.11□□□□□ -0.15
NPM3-204ENST00000474993 RNASEKQ6P5S7 137 aaKnown RBP14.11□□□□□ -0.15
NPM3-204ENST00000474993 DNAH7Q8WXX0 4024 aa14.1□□□□□ -0.15
NPM3-204ENST00000474993 ESDP10768 282 aa14.1□□□□□ -0.15
NPM3-204ENST00000474993 CHCHD7Q9BUK0 85 aa14.1□□□□□ -0.15
NPM3-204ENST00000474993 TMEM262E9PQX1 116 aa14.09□□□□□ -0.15
NPM3-204ENST00000474993 C20orf203Q8NBC4 194 aa14.09□□□□□ -0.15
NPM3-204ENST00000474993 A0A087WX48 190 aa14.08□□□□□ -0.16
NPM3-204ENST00000474993 SIVA1O15304 175 aa14.08□□□□□ -0.16
NPM3-204ENST00000474993 HSBP1O75506 76 aa14.07□□□□□ -0.16
NPM3-204ENST00000474993 AMMECR1LQ6DCA0 310 aa14.07□□□□□ -0.16
NPM3-204ENST00000474993 CYSLTR1Q9Y271 337 aa14.07□□□□□ -0.16
NPM3-204ENST00000474993 ZNF25P17030 456 aaPredicted RBP14.06□□□□□ -0.16
NPM3-204ENST00000474993 GAGE6Q13070 117 aa14.06□□□□□ -0.16
NPM3-204ENST00000474993 Q9H8V8 135 aa14.06□□□□□ -0.16
NPM3-204ENST00000474993 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.05□□□□□ -0.16
NPM3-204ENST00000474993 TRAV9-2A0A087WT02 112 aa14.05□□□□□ -0.16
NPM3-204ENST00000474993 IGKV2-29A2NJV5 120 aaPredicted RBP14.05□□□□□ -0.16
NPM3-204ENST00000474993 K7EP13 123 aa14.05□□□□□ -0.16
NPM3-204ENST00000474993 BTF3P20290 206 aaKnown RBP14.05□□□□□ -0.16
NPM3-204ENST00000474993 WFDC10BQ8IUB3 73 aa14.05□□□□□ -0.16
NPM3-204ENST00000474993 URB1-AS1Q96HZ7 61 aa14.05□□□□□ -0.16
NPM3-204ENST00000474993 TMEM101Q96IK0 257 aa14.05□□□□□ -0.16
NPM3-204ENST00000474993 A0A1B0GUV1 79 aa14.04□□□□□ -0.16
NPM3-204ENST00000474993 SERF1AO75920 110 aa14.04□□□□□ -0.16
NPM3-204ENST00000474993 DNAH10OSP0CZ25 163 aa14.04□□□□□ -0.16
NPM3-204ENST00000474993 LINC01556Q5JQF7 62 aa14.04□□□□□ -0.16
NPM3-204ENST00000474993 DGAT2L7PQ6IED9 249 aa14.04□□□□□ -0.16
NPM3-204ENST00000474993 C2orf66Q6UXQ4 117 aa14.04□□□□□ -0.16
NPM3-204ENST00000474993 MRPL52Q86TS9 123 aaKnown RBP14.04□□□□□ -0.16
NPM3-204ENST00000474993 TIMM21Q9BVV7 248 aa14.04□□□□□ -0.16
NPM3-204ENST00000474993 LY6G6CO95867 125 aa14.03□□□□□ -0.16
NPM3-204ENST00000474993 HBDP02042 147 aa14.03□□□□□ -0.16
NPM3-204ENST00000474993 FGF6P10767 208 aa14.03□□□□□ -0.16
NPM3-204ENST00000474993 NDUFA6P56556 154 aa14.03□□□□□ -0.16
NPM3-204ENST00000474993 LINC00476Q8WZB0 136 aa14.03□□□□□ -0.16
NPM3-204ENST00000474993 SPANXA1Q9NS26 97 aa14.03□□□□□ -0.16
NPM3-204ENST00000474993 S100A6P06703 90 aa14.02□□□□□ -0.17
NPM3-204ENST00000474993 COA6Q5JTJ3 125 aaKnown RBP14.02□□□□□ -0.17
NPM3-204ENST00000474993 C10orf126Q8N4M7 172 aa14.02□□□□□ -0.17
NPM3-204ENST00000474993 OR5A1Q8NGJ0 315 aa14.02□□□□□ -0.17
NPM3-204ENST00000474993 TOMM6Q96B49 74 aa14.02□□□□□ -0.17
NPM3-204ENST00000474993 CSDC2Q9Y534 153 aaKnown RBP14.02□□□□□ -0.17
NPM3-204ENST00000474993 PYGO1Q9Y3Y4 419 aa14.01□□□□□ -0.17
NPM3-204ENST00000474993 DYNC2H1Q8NCM8 4307 aaKnown RBP14.01□□□□□ -0.17
NPM3-204ENST00000474993 NPSP0C0P6 89 aa14□□□□□ -0.17
NPM3-204ENST00000474993 RBX1P62877 108 aa14□□□□□ -0.17
NPM3-204ENST00000474993 RPL39P62891 51 aaKnown RBP14□□□□□ -0.17
NPM3-204ENST00000474993 TTC32Q5I0X7 151 aa14□□□□□ -0.17
NPM3-204ENST00000474993 UBE2D4Q9Y2X8 147 aa14□□□□□ -0.17
NPM3-204ENST00000474993 IGHV3-30P01768 117 aa13.99□□□□□ -0.17
NPM3-204ENST00000474993 IGHV3-33P01772 117 aa13.99□□□□□ -0.17
NPM3-204ENST00000474993 IGHV3-30-3P0DP02 117 aa13.99□□□□□ -0.17
NPM3-204ENST00000474993 IGHV3-30-5P0DP03 117 aa13.99□□□□□ -0.17
NPM3-204ENST00000474993 MPV17L2Q567V2 206 aa13.99□□□□□ -0.17
NPM3-204ENST00000474993 PAPPA-AS1Q5QFB9 102 aa13.99□□□□□ -0.17
NPM3-204ENST00000474993 SCGB3A1Q96QR1 104 aa13.99□□□□□ -0.17
NPM3-204ENST00000474993 ERASQ7Z444 233 aa13.98□□□□□ -0.17
NPM3-204ENST00000474993 TMEM141Q96I45 108 aa13.98□□□□□ -0.17
NPM3-204ENST00000474993 CSMD3Q7Z407 3707 aa13.98□□□□□ -0.17
NPM3-204ENST00000474993 TENM2Q9NT68 2774 aa13.98□□□□□ -0.17
NPM3-204ENST00000474993 ANGP03950 147 aaKnown RBP13.97□□□□□ -0.17
NPM3-204ENST00000474993 LINC00310P59036 64 aa13.97□□□□□ -0.17
NPM3-204ENST00000474993 TIMM17AQ99595 171 aa13.97□□□□□ -0.17
NPM3-204ENST00000474993 STARD9Q9P2P6 4700 aa13.96□□□□□ -0.17
NPM3-204ENST00000474993 ATP5LO75964 103 aa13.96□□□□□ -0.17
NPM3-204ENST00000474993 MRPS36P82909 103 aaKnown RBP13.96□□□□□ -0.17
NPM3-204ENST00000474993 PMCHL1Q16048 86 aa13.96□□□□□ -0.17
NPM3-204ENST00000474993 Q6ZN92 141 aa13.96□□□□□ -0.17
NPM3-204ENST00000474993 Q8N976 141 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms