RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 MRPL51Q4U2R6 128 aaKnown RBP8.07□□□□□ -1.12
CLIP2-204ENST00000474962 TTC32Q5I0X7 151 aa8.07□□□□□ -1.12
CLIP2-204ENST00000474962 LELP1Q5T871 98 aa8.07□□□□□ -1.12
CLIP2-204ENST00000474962 RPL39LQ96EH5 51 aaKnown RBP8.07□□□□□ -1.12
CLIP2-204ENST00000474962 ST20Q9HBF5 79 aa8.07□□□□□ -1.12
CLIP2-204ENST00000474962 NCR2O95944 276 aa8.06□□□□□ -1.12
CLIP2-204ENST00000474962 PPBPP02775 128 aa8.06□□□□□ -1.12
CLIP2-204ENST00000474962 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
CLIP2-204ENST00000474962 TRAV9-2A0A087WT02 112 aa8.05□□□□□ -1.12
CLIP2-204ENST00000474962 SDHAF1A6NFY7 115 aa8.05□□□□□ -1.12
CLIP2-204ENST00000474962 SMKR1H3BMG3 65 aa8.05□□□□□ -1.12
CLIP2-204ENST00000474962 CDK2AP2O75956 126 aa8.05□□□□□ -1.12
CLIP2-204ENST00000474962 HLA-DQA1P01909 254 aa8.05□□□□□ -1.12
CLIP2-204ENST00000474962 PMCHP20382 165 aa8.05□□□□□ -1.12
CLIP2-204ENST00000474962 COTL1Q14019 142 aa8.05□□□□□ -1.12
CLIP2-204ENST00000474962 TMEM136Q6ZRR5 245 aa8.05□□□□□ -1.12
CLIP2-204ENST00000474962 ORMDL3Q8N138 153 aa8.05□□□□□ -1.12
CLIP2-204ENST00000474962 SMCO4Q9NRQ5 59 aa8.05□□□□□ -1.12
CLIP2-204ENST00000474962 TRBV6-8A0A0A6YYG3 113 aa8.04□□□□□ -1.12
CLIP2-204ENST00000474962 TRBV6-5A0A0K0K1A5 114 aa8.04□□□□□ -1.12
CLIP2-204ENST00000474962 D6R8Y8 96 aa8.04□□□□□ -1.12
CLIP2-204ENST00000474962 FUSP35637 526 aaKnown RBP eCLIP8.04□□□□□ -1.12
CLIP2-204ENST00000474962 ATRAIDQ6UW56 229 aa8.04□□□□□ -1.12
CLIP2-204ENST00000474962 Q6ZRN7 208 aaPredicted RBP8.04□□□□□ -1.12
CLIP2-204ENST00000474962 GNB1LQ9BYB4 327 aa8.04□□□□□ -1.12
CLIP2-204ENST00000474962 TRBV25-1A0A075B6N4 114 aa8.03□□□□□ -1.12
CLIP2-204ENST00000474962 TMEM262E9PQX1 116 aa8.03□□□□□ -1.12
CLIP2-204ENST00000474962 I3L3M4 83 aa8.03□□□□□ -1.12
CLIP2-204ENST00000474962 VCYO14598 125 aa8.03□□□□□ -1.12
CLIP2-204ENST00000474962 APCSP02743 223 aa8.03□□□□□ -1.12
CLIP2-204ENST00000474962 MT-ND6P03923 174 aa8.03□□□□□ -1.12
CLIP2-204ENST00000474962 BTF3P20290 206 aaKnown RBP8.03□□□□□ -1.12
CLIP2-204ENST00000474962 ELOBQ15370 118 aa8.03□□□□□ -1.12
CLIP2-204ENST00000474962 MAPKAPK5-AS1Q8N8E1 139 aa8.03□□□□□ -1.12
CLIP2-204ENST00000474962 PRELID3AQ96N28 172 aa8.03□□□□□ -1.12
CLIP2-204ENST00000474962 CHCHD5Q9BSY4 110 aa8.03□□□□□ -1.12
CLIP2-204ENST00000474962 A0A087WX48 190 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 IGHV1-24A0A0C4DH33 117 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 PHOX2AO14813 284 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 UBE2L6O14933 153 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 GAS8-AS1O95177 125 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 TNFRSF6BO95407 300 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 LORP23490 312 aaPredicted RBP8.02□□□□□ -1.13
CLIP2-204ENST00000474962 FCER1GP30273 86 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 RPS10P46783 165 aaKnown RBP8.02□□□□□ -1.13
CLIP2-204ENST00000474962 AMTP48728 403 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 PKIAP61925 76 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 SUMO2P61956 95 aaKnown RBP8.02□□□□□ -1.13
CLIP2-204ENST00000474962 WFDC10BQ8IUB3 73 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 KIR2DL4Q99706 377 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 C20orf78Q9BR46 151 aa8.02□□□□□ -1.13
CLIP2-204ENST00000474962 TRBV24-1A0A075B6N3 115 aa8.01□□□□□ -1.13
CLIP2-204ENST00000474962 FABP9Q0Z7S8 132 aa8.01□□□□□ -1.13
CLIP2-204ENST00000474962 C10orf126Q8N4M7 172 aa8.01□□□□□ -1.13
CLIP2-204ENST00000474962 NRACQ8N912 160 aa8.01□□□□□ -1.13
CLIP2-204ENST00000474962 DEFB104AQ8WTQ1 72 aa8.01□□□□□ -1.13
CLIP2-204ENST00000474962 TMEM70Q9BUB7 260 aa8.01□□□□□ -1.13
CLIP2-204ENST00000474962 LAMTOR2Q9Y2Q5 125 aa8.01□□□□□ -1.13
CLIP2-204ENST00000474962 TRAPPC1Q9Y5R8 145 aa8.01□□□□□ -1.13
CLIP2-204ENST00000474962 K7EP13 123 aa8□□□□□ -1.13
CLIP2-204ENST00000474962 TCAPO15273 167 aa8□□□□□ -1.13
CLIP2-204ENST00000474962 IGHV3-30P01768 117 aa8□□□□□ -1.13
CLIP2-204ENST00000474962 IGHV3-33P01772 117 aa8□□□□□ -1.13
CLIP2-204ENST00000474962 IGHV3-30-3P0DP02 117 aa8□□□□□ -1.13
CLIP2-204ENST00000474962 IGHV3-30-5P0DP03 117 aa8□□□□□ -1.13
CLIP2-204ENST00000474962 POLR2KP53803 58 aaKnown RBP8□□□□□ -1.13
CLIP2-204ENST00000474962 KIAA1644Q3SXP7 199 aa8□□□□□ -1.13
CLIP2-204ENST00000474962 CBLN2Q8IUK8 224 aa8□□□□□ -1.13
CLIP2-204ENST00000474962 TMEM243Q9BU79 118 aa8□□□□□ -1.13
CLIP2-204ENST00000474962 MRPL18Q9H0U6 180 aaKnown RBP8□□□□□ -1.13
CLIP2-204ENST00000474962 NPYP01303 97 aa7.99□□□□□ -1.13
CLIP2-204ENST00000474962 DNAH10OSP0CZ25 163 aa7.99□□□□□ -1.13
CLIP2-204ENST00000474962 RAB5AP20339 215 aa7.99□□□□□ -1.13
CLIP2-204ENST00000474962 S100A1P23297 94 aa7.99□□□□□ -1.13
CLIP2-204ENST00000474962 IQCJQ1A5X6 159 aa7.99□□□□□ -1.13
CLIP2-204ENST00000474962 LINC01556Q5JQF7 62 aa7.99□□□□□ -1.13
CLIP2-204ENST00000474962 MAP1LC3AQ9H492 121 aa7.99□□□□□ -1.13
CLIP2-204ENST00000474962 TRBV27A0A0K0K1C4 114 aa7.98□□□□□ -1.13
CLIP2-204ENST00000474962 LOC389332A0A1B0GUA5 103 aa7.98□□□□□ -1.13
CLIP2-204ENST00000474962 GAGE6Q13070 117 aa7.98□□□□□ -1.13
CLIP2-204ENST00000474962 AMMECR1LQ6DCA0 310 aa7.98□□□□□ -1.13
CLIP2-204ENST00000474962 NTM-AS1Q6ZSK4 140 aa7.98□□□□□ -1.13
CLIP2-204ENST00000474962 NIT1Q86X76 327 aa7.98□□□□□ -1.13
CLIP2-204ENST00000474962 Q8N1X5 172 aa7.98□□□□□ -1.13
CLIP2-204ENST00000474962 CHCHD7Q9BUK0 85 aa7.98□□□□□ -1.13
CLIP2-204ENST00000474962 SMIM2Q9BVW6 85 aa7.98□□□□□ -1.13
CLIP2-204ENST00000474962 RPL32P62910 135 aaKnown RBP7.97□□□□□ -1.13
CLIP2-204ENST00000474962 TMEM18Q96B42 140 aa7.97□□□□□ -1.13
CLIP2-204ENST00000474962 A0A087WTM6 91 aa7.96□□□□□ -1.14
CLIP2-204ENST00000474962 H7C423 109 aa7.96□□□□□ -1.14
CLIP2-204ENST00000474962 TSHBP01222 138 aa7.96□□□□□ -1.14
CLIP2-204ENST00000474962 SMAGPQ0VAQ4 97 aa7.96□□□□□ -1.14
CLIP2-204ENST00000474962 NFE4Q86UQ8 179 aa7.96□□□□□ -1.14
CLIP2-204ENST00000474962 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.95□□□□□ -1.14
CLIP2-204ENST00000474962 IGKV2-29A2NJV5 120 aaPredicted RBP7.95□□□□□ -1.14
CLIP2-204ENST00000474962 ATP6V1G1O75348 118 aa7.95□□□□□ -1.14
CLIP2-204ENST00000474962 ANGP03950 147 aaKnown RBP7.95□□□□□ -1.14
CLIP2-204ENST00000474962 DGAT2L7PQ6IED9 249 aa7.95□□□□□ -1.14
CLIP2-204ENST00000474962 RNASEKQ6P5S7 137 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms