RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 NCR2O95944 276 aa9.12□□□□□ -0.95
DNMT3A-211ENST00000474887 HLA-DQA1P01909 254 aa9.12□□□□□ -0.95
DNMT3A-211ENST00000474887 KRTAP26-1Q6PEX3 210 aa9.12□□□□□ -0.95
DNMT3A-211ENST00000474887 FAM231DQ6ZW35 169 aa9.12□□□□□ -0.95
DNMT3A-211ENST00000474887 C9orf163Q8N9P6 203 aa9.12□□□□□ -0.95
DNMT3A-211ENST00000474887 LYPD6BQ8NI32 183 aa9.12□□□□□ -0.95
DNMT3A-211ENST00000474887 H7C423 109 aa9.11□□□□□ -0.95
DNMT3A-211ENST00000474887 FOXA3P55318 350 aaPredicted RBP9.11□□□□□ -0.95
DNMT3A-211ENST00000474887 CT83Q5H943 113 aa9.11□□□□□ -0.95
DNMT3A-211ENST00000474887 C20orf203Q8NBC4 194 aa9.11□□□□□ -0.95
DNMT3A-211ENST00000474887 CIRBP-AS1Q8TBR5 109 aa9.11□□□□□ -0.95
DNMT3A-211ENST00000474887 PRSS1P07477 247 aa9.1□□□□□ -0.95
DNMT3A-211ENST00000474887 AMTP48728 403 aa9.1□□□□□ -0.95
DNMT3A-211ENST00000474887 LINC01620Q4KN68 170 aa9.1□□□□□ -0.95
DNMT3A-211ENST00000474887 RNASE7Q9H1E1 156 aaKnown RBP9.1□□□□□ -0.95
DNMT3A-211ENST00000474887 FAM231BA6NCW3 169 aa9.09□□□□□ -0.95
DNMT3A-211ENST00000474887 KRTAP29-1A8MX34 341 aaPredicted RBP9.09□□□□□ -0.95
DNMT3A-211ENST00000474887 J3QL48 77 aa9.09□□□□□ -0.95
DNMT3A-211ENST00000474887 K7EN84 100 aa9.09□□□□□ -0.95
DNMT3A-211ENST00000474887 GATCO43716 136 aaKnown RBP9.09□□□□□ -0.95
DNMT3A-211ENST00000474887 CNBPP62633 177 aaKnown RBP9.09□□□□□ -0.95
DNMT3A-211ENST00000474887 CFAP161Q6P656 301 aa9.09□□□□□ -0.95
DNMT3A-211ENST00000474887 AP5S1Q9NUS5 200 aa9.09□□□□□ -0.95
DNMT3A-211ENST00000474887 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.08□□□□□ -0.96
DNMT3A-211ENST00000474887 GATD1Q8NB37 220 aa9.08□□□□□ -0.96
DNMT3A-211ENST00000474887 BORCS7Q96B45 105 aa9.08□□□□□ -0.96
DNMT3A-211ENST00000474887 ALKAL2Q6UX46 152 aa9.07□□□□□ -0.96
DNMT3A-211ENST00000474887 GTSF1Q8WW33 167 aa9.07□□□□□ -0.96
DNMT3A-211ENST00000474887 GFRA4Q9GZZ7 299 aa9.07□□□□□ -0.96
DNMT3A-211ENST00000474887 IGLV4-60A0A075B6I1 120 aa9.06□□□□□ -0.96
DNMT3A-211ENST00000474887 TRBV6-5A0A0K0K1A5 114 aa9.06□□□□□ -0.96
DNMT3A-211ENST00000474887 CLPSL2Q6UWE3 100 aa9.06□□□□□ -0.96
DNMT3A-211ENST00000474887 SDIM1Q6ZPB5 146 aa9.06□□□□□ -0.96
DNMT3A-211ENST00000474887 RNF185Q96GF1 192 aa9.06□□□□□ -0.96
DNMT3A-211ENST00000474887 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
DNMT3A-211ENST00000474887 OXTP01178 125 aa9.05□□□□□ -0.96
DNMT3A-211ENST00000474887 ZNF25P17030 456 aaPredicted RBP9.05□□□□□ -0.96
DNMT3A-211ENST00000474887 AMMECR1LQ6DCA0 310 aa9.05□□□□□ -0.96
DNMT3A-211ENST00000474887 EIF5A2Q9GZV4 153 aaKnown RBP9.05□□□□□ -0.96
DNMT3A-211ENST00000474887 IGLV10-54A0A075B6I4 117 aa9.04□□□□□ -0.96
DNMT3A-211ENST00000474887 IGHV3-64A0A075B6Q5 118 aa9.04□□□□□ -0.96
DNMT3A-211ENST00000474887 A0A1B0GUT8 65 aa9.04□□□□□ -0.96
DNMT3A-211ENST00000474887 I3L3M4 83 aa9.04□□□□□ -0.96
DNMT3A-211ENST00000474887 APCSP02743 223 aa9.04□□□□□ -0.96
DNMT3A-211ENST00000474887 TSKUQ8WUA8 353 aa9.04□□□□□ -0.96
DNMT3A-211ENST00000474887 SMIM7Q9BQ49 75 aa9.04□□□□□ -0.96
DNMT3A-211ENST00000474887 OSTCQ9NRP0 149 aa9.04□□□□□ -0.96
DNMT3A-211ENST00000474887 SDHAF1A6NFY7 115 aa9.03□□□□□ -0.96
DNMT3A-211ENST00000474887 PPP1R17O96001 155 aa9.03□□□□□ -0.96
DNMT3A-211ENST00000474887 PMCHP20382 165 aa9.03□□□□□ -0.96
DNMT3A-211ENST00000474887 KRTAP10-4P60372 401 aaPredicted RBP9.03□□□□□ -0.96
DNMT3A-211ENST00000474887 CIRBPQ14011 172 aaKnown RBP9.03□□□□□ -0.96
DNMT3A-211ENST00000474887 TMEM191AQ9H0A3 160 aa9.03□□□□□ -0.96
DNMT3A-211ENST00000474887 ZNF727A8MUV8 499 aa9.02□□□□□ -0.97
DNMT3A-211ENST00000474887 FAM74A3Q4VXF1 159 aa9.02□□□□□ -0.97
DNMT3A-211ENST00000474887 LINC01551Q86U37 167 aa9.02□□□□□ -0.97
DNMT3A-211ENST00000474887 MRAP2Q96G30 205 aa9.02□□□□□ -0.97
DNMT3A-211ENST00000474887 BTF3L4Q96K17 158 aa9.02□□□□□ -0.97
DNMT3A-211ENST00000474887 TRAV26-2A0A0B4J265 109 aa9.01□□□□□ -0.97
DNMT3A-211ENST00000474887 FGF6P10767 208 aa9.01□□□□□ -0.97
DNMT3A-211ENST00000474887 CEBPGP53567 150 aa9.01□□□□□ -0.97
DNMT3A-211ENST00000474887 RPL37AP61513 92 aaKnown RBP9.01□□□□□ -0.97
DNMT3A-211ENST00000474887 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
DNMT3A-211ENST00000474887 RPL39LQ96EH5 51 aaKnown RBP9.01□□□□□ -0.97
DNMT3A-211ENST00000474887 TMEM101Q96IK0 257 aa9.01□□□□□ -0.97
DNMT3A-211ENST00000474887 ST20Q9HBF5 79 aa9.01□□□□□ -0.97
DNMT3A-211ENST00000474887 PKIGQ9Y2B9 76 aa9.01□□□□□ -0.97
DNMT3A-211ENST00000474887 GAGE12HA6NDE8 117 aa9□□□□□ -0.97
DNMT3A-211ENST00000474887 HIGD1CA8MV81 97 aa9□□□□□ -0.97
DNMT3A-211ENST00000474887 RIGQ13278 110 aa9□□□□□ -0.97
DNMT3A-211ENST00000474887 RNASEKQ6P5S7 137 aaKnown RBP9□□□□□ -0.97
DNMT3A-211ENST00000474887 OR5A1Q8NGJ0 315 aa9□□□□□ -0.97
DNMT3A-211ENST00000474887 hCG_2014768A0A024R1R8 64 aa8.99□□□□□ -0.97
DNMT3A-211ENST00000474887 TRBV27A0A0K0K1C4 114 aa8.99□□□□□ -0.97
DNMT3A-211ENST00000474887 ESDP10768 282 aa8.99□□□□□ -0.97
DNMT3A-211ENST00000474887 DPH3Q96FX2 82 aa8.99□□□□□ -0.97
DNMT3A-211ENST00000474887 SMDT1Q9H4I9 107 aa8.99□□□□□ -0.97
DNMT3A-211ENST00000474887 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
DNMT3A-211ENST00000474887 VCYO14598 125 aa8.98□□□□□ -0.97
DNMT3A-211ENST00000474887 CCL25O15444 150 aa8.98□□□□□ -0.97
DNMT3A-211ENST00000474887 SRP19P09132 144 aaKnown RBP8.98□□□□□ -0.97
DNMT3A-211ENST00000474887 RPS10P46783 165 aaKnown RBP8.98□□□□□ -0.97
DNMT3A-211ENST00000474887 POLR2KP53803 58 aaKnown RBP8.98□□□□□ -0.97
DNMT3A-211ENST00000474887 TMEM241Q24JQ0 296 aa8.98□□□□□ -0.97
DNMT3A-211ENST00000474887 SERTAD4-AS1Q5TG53 156 aa8.98□□□□□ -0.97
DNMT3A-211ENST00000474887 MRPL52Q86TS9 123 aaKnown RBP8.98□□□□□ -0.97
DNMT3A-211ENST00000474887 CHCHD10Q8WYQ3 142 aaPredicted RBP8.98□□□□□ -0.97
DNMT3A-211ENST00000474887 A0A1B0GW15 77 aa8.97□□□□□ -0.97
DNMT3A-211ENST00000474887 RAB4AP20338 218 aa8.97□□□□□ -0.97
DNMT3A-211ENST00000474887 C15orf56Q8N910 161 aa8.97□□□□□ -0.97
DNMT3A-211ENST00000474887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.96□□□□□ -0.98
DNMT3A-211ENST00000474887 GVQW2A0A096LPI5 108 aaPredicted RBP8.96□□□□□ -0.98
DNMT3A-211ENST00000474887 IGKV2-29A2NJV5 120 aaPredicted RBP8.96□□□□□ -0.98
DNMT3A-211ENST00000474887 PPP1R2P9O14990 202 aa8.96□□□□□ -0.98
DNMT3A-211ENST00000474887 TSHBP01222 138 aa8.96□□□□□ -0.98
DNMT3A-211ENST00000474887 SLPIP03973 132 aa8.96□□□□□ -0.98
DNMT3A-211ENST00000474887 LINC00474Q9P2X8 69 aa8.96□□□□□ -0.98
DNMT3A-211ENST00000474887 NAT8BQ9UHF3 227 aa8.96□□□□□ -0.98
DNMT3A-211ENST00000474887 CSDC2Q9Y534 153 aaKnown RBP8.96□□□□□ -0.98
DNMT3A-211ENST00000474887 IGKV3OR2-268A0A0C4DH90 116 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms