RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 WFDC10AQ9H1F0 79 aa15.64■□□□□ 0.09
CCM2-206ENST00000474617 VCX2Q9H322 139 aa15.64■□□□□ 0.09
CCM2-206ENST00000474617 DAZ3Q9NR90 486 aaKnown RBP15.64■□□□□ 0.09
CCM2-206ENST00000474617 FN1P02751 2386 aaKnown RBP15.64■□□□□ 0.09
CCM2-206ENST00000474617 IGLV4-69A0A075B6H9 119 aa15.63■□□□□ 0.09
CCM2-206ENST00000474617 TRBV7-3A0A075B6L6 115 aa15.63■□□□□ 0.09
CCM2-206ENST00000474617 K7EQD1 137 aa15.63■□□□□ 0.09
CCM2-206ENST00000474617 Q6ZSN1 163 aa15.63■□□□□ 0.09
CCM2-206ENST00000474617 KIR2DL5BQ8NHK3 375 aa15.63■□□□□ 0.09
CCM2-206ENST00000474617 HIVEP1P15822 2718 aa15.63■□□□□ 0.09
CCM2-206ENST00000474617 WIPF1O43516 503 aa15.63■□□□□ 0.09
CCM2-206ENST00000474617 WFDC9Q8NEX5 89 aa15.63■□□□□ 0.09
CCM2-206ENST00000474617 TIMM21Q9BVV7 248 aa15.63■□□□□ 0.09
CCM2-206ENST00000474617 NOP10Q9NPE3 64 aaKnown RBP15.63■□□□□ 0.09
CCM2-206ENST00000474617 ZMAT5Q9UDW3 170 aaKnown RBP15.63■□□□□ 0.09
CCM2-206ENST00000474617 PLAC8L1A1L4L8 177 aa15.62■□□□□ 0.09
CCM2-206ENST00000474617 Q6ZTI0 123 aa15.62■□□□□ 0.09
CCM2-206ENST00000474617 IGLV4-3A0A075B6K6 122 aa15.61■□□□□ 0.09
CCM2-206ENST00000474617 TP73-AS1Q9UF72 201 aa15.61■□□□□ 0.09
CCM2-206ENST00000474617 COX11Q9Y6N1 276 aa15.61■□□□□ 0.09
CCM2-206ENST00000474617 TRBV25-1A0A075B6N4 114 aa15.6■□□□□ 0.09
CCM2-206ENST00000474617 TRBV6-4A0A1B0GX49 114 aa15.6■□□□□ 0.09
CCM2-206ENST00000474617 AMELXQ99217 191 aa15.6■□□□□ 0.09
CCM2-206ENST00000474617 MYMXA0A1B0GTQ4 84 aa15.59■□□□□ 0.09
CCM2-206ENST00000474617 ZNF479Q96JC4 524 aa15.59■□□□□ 0.09
CCM2-206ENST00000474617 CHCHD7Q9BUK0 85 aa15.59■□□□□ 0.09
CCM2-206ENST00000474617 CHAC1Q9BUX1 264 aa15.59■□□□□ 0.09
CCM2-206ENST00000474617 TRGV2A0A075B6R0 118 aa15.58■□□□□ 0.09
CCM2-206ENST00000474617 TRAV8-6A0A0B4J262 113 aa15.58■□□□□ 0.09
CCM2-206ENST00000474617 APOC4P55056 127 aa15.58■□□□□ 0.09
CCM2-206ENST00000474617 MRPS36P82909 103 aaKnown RBP15.58■□□□□ 0.09
CCM2-206ENST00000474617 PRADC1Q9BSG0 188 aa15.58■□□□□ 0.08
CCM2-206ENST00000474617 ZNF25P17030 456 aaPredicted RBP15.57■□□□□ 0.08
CCM2-206ENST00000474617 GTSF1LQ9H1H1 148 aa15.57■□□□□ 0.08
CCM2-206ENST00000474617 TCTAP57738 103 aa15.56■□□□□ 0.08
CCM2-206ENST00000474617 ZNRF2Q8NHG8 242 aa15.56■□□□□ 0.08
CCM2-206ENST00000474617 UBE2D4Q9Y2X8 147 aa15.56■□□□□ 0.08
CCM2-206ENST00000474617 CSDC2Q9Y534 153 aaKnown RBP15.56■□□□□ 0.08
CCM2-206ENST00000474617 UBE2D3P61077 147 aa15.55■□□□□ 0.08
CCM2-206ENST00000474617 UBE2D2P62837 147 aa15.55■□□□□ 0.08
CCM2-206ENST00000474617 LINC00469Q8N7U9 141 aa15.55■□□□□ 0.08
CCM2-206ENST00000474617 LINC00612Q8N6U2 182 aa15.54■□□□□ 0.08
CCM2-206ENST00000474617 TM2D2Q9BX73 214 aa15.54■□□□□ 0.08
CCM2-206ENST00000474617 H7C423 109 aa15.53■□□□□ 0.08
CCM2-206ENST00000474617 TMEM170BQ5T4T1 132 aa15.53■□□□□ 0.08
CCM2-206ENST00000474617 SLC25A29Q8N8R3 303 aa15.53■□□□□ 0.08
CCM2-206ENST00000474617 GAGE12BA1L429 117 aa15.53■□□□□ 0.08
CCM2-206ENST00000474617 H3BRM9 83 aa15.53■□□□□ 0.08
CCM2-206ENST00000474617 GAGE7O76087 117 aa15.53■□□□□ 0.08
CCM2-206ENST00000474617 GAGE12FP0CL80 117 aa15.53■□□□□ 0.08
CCM2-206ENST00000474617 GAGE12GP0CL81 117 aa15.53■□□□□ 0.08
CCM2-206ENST00000474617 GAGE12IP0CL82 117 aa15.53■□□□□ 0.08
CCM2-206ENST00000474617 JMJD1CQ15652 2540 aa15.52■□□□□ 0.08
CCM2-206ENST00000474617 TAX1BP3O14907 124 aa15.52■□□□□ 0.07
CCM2-206ENST00000474617 PLEKHB2Q96CS7 222 aa15.52■□□□□ 0.07
CCM2-206ENST00000474617 BAHCC1Q9P281 2608 aa15.52■□□□□ 0.07
CCM2-206ENST00000474617 TRGV4A0A0C4DH28 118 aa15.51■□□□□ 0.07
CCM2-206ENST00000474617 TINCRA0A1B0GVN0 87 aa15.51■□□□□ 0.07
CCM2-206ENST00000474617 LYRM9A8MSI8 78 aa15.51■□□□□ 0.07
CCM2-206ENST00000474617 MAPKAPK5-AS1Q8N8E1 139 aa15.51■□□□□ 0.07
CCM2-206ENST00000474617 DEFB104AQ8WTQ1 72 aa15.51■□□□□ 0.07
CCM2-206ENST00000474617 TMEM223A0PJW6 202 aa15.5■□□□□ 0.07
CCM2-206ENST00000474617 ZNF815PA8K554 130 aa15.5■□□□□ 0.07
CCM2-206ENST00000474617 CEND1Q8N111 149 aa15.5■□□□□ 0.07
CCM2-206ENST00000474617 LEPROTO15243 131 aa15.49■□□□□ 0.07
CCM2-206ENST00000474617 DGAT2L7PQ6IED9 249 aa15.49■□□□□ 0.07
CCM2-206ENST00000474617 PHLDA1Q8WV24 401 aaPredicted RBP15.49■□□□□ 0.07
CCM2-206ENST00000474617 Q9UF83 564 aa15.49■□□□□ 0.07
CCM2-206ENST00000474617 TTTY13Q9BZ97 58 aa15.48■□□□□ 0.07
CCM2-206ENST00000474617 ZNF22P17026 224 aaPredicted RBP15.48■□□□□ 0.07
CCM2-206ENST00000474617 OPRPNQ99935 248 aaPredicted RBP15.48■□□□□ 0.07
CCM2-206ENST00000474617 X6R8D5 127 aa15.48■□□□□ 0.07
CCM2-206ENST00000474617 FLNBO75369 2602 aaKnown RBP15.47■□□□□ 0.07
CCM2-206ENST00000474617 LGALS3P17931 250 aaKnown RBP15.47■□□□□ 0.07
CCM2-206ENST00000474617 GCSHP23434 173 aa15.47■□□□□ 0.07
CCM2-206ENST00000474617 HIST1H4GQ99525 98 aa15.47■□□□□ 0.07
CCM2-206ENST00000474617 NIPBLQ6KC79 2804 aaeCLIP15.46■□□□□ 0.071e-6■■■■■ 35.4
CCM2-206ENST00000474617 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.46■□□□□ 0.07
CCM2-206ENST00000474617 IGHV3-38A0A0C4DH36 116 aa15.46■□□□□ 0.07
CCM2-206ENST00000474617 IGKV2-29A2NJV5 120 aaPredicted RBP15.46■□□□□ 0.07
CCM2-206ENST00000474617 J3QQQ9 107 aa15.46■□□□□ 0.07
CCM2-206ENST00000474617 FHL2Q14192 279 aa15.46■□□□□ 0.07
CCM2-206ENST00000474617 SCGB1D4Q6XE38 83 aa15.46■□□□□ 0.07
CCM2-206ENST00000474617 FAM19A3Q7Z5A8 133 aa15.46■□□□□ 0.07
CCM2-206ENST00000474617 FAM104AQ969W3 186 aa15.46■□□□□ 0.07
CCM2-206ENST00000474617 A0A0J9YXV3 536 aa15.45■□□□□ 0.06
CCM2-206ENST00000474617 GAGE12JA6NER3 117 aa15.45■□□□□ 0.06
CCM2-206ENST00000474617 SMIM13P0DJ93 91 aa15.45■□□□□ 0.06
CCM2-206ENST00000474617 PTTG1IPP53801 180 aa15.45■□□□□ 0.06
CCM2-206ENST00000474617 EMP1P54849 157 aa15.45■□□□□ 0.06
CCM2-206ENST00000474617 TIRAPP58753 221 aa15.45■□□□□ 0.06
CCM2-206ENST00000474617 GAGE4Q13068 117 aa15.45■□□□□ 0.06
CCM2-206ENST00000474617 GAGE5Q13069 117 aa15.45■□□□□ 0.06
CCM2-206ENST00000474617 GAGE13Q4V321 117 aa15.45■□□□□ 0.06
CCM2-206ENST00000474617 TMEM238LA0A1B0GVL6 79 aa15.44■□□□□ 0.06
CCM2-206ENST00000474617 A6NJY4 79 aa15.44■□□□□ 0.06
CCM2-206ENST00000474617 SBSPONQ8IVN8 264 aa15.44■□□□□ 0.06
CCM2-206ENST00000474617 TMEM243Q9BU79 118 aa15.44■□□□□ 0.06
CCM2-206ENST00000474617 SPANXB1Q9NS25 103 aaPredicted RBP15.44■□□□□ 0.06
CCM2-206ENST00000474617 UBE2V1Q13404 147 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms