RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 OR4C5Q8NGB2 326 aa7.03□□□□□ -1.28
USP39-214ENST00000474572 DEFB104AQ8WTQ1 72 aa7.03□□□□□ -1.28
USP39-214ENST00000474572 SPANXA1Q9NS26 97 aa7.03□□□□□ -1.28
USP39-214ENST00000474572 MYO9AB2RTY4 2548 aa7.03□□□□□ -1.28
USP39-214ENST00000474572 TRGV1A0A0A0MS02 117 aa7.02□□□□□ -1.29
USP39-214ENST00000474572 K7EQD1 137 aa7.02□□□□□ -1.29
USP39-214ENST00000474572 RPL35AP18077 110 aaKnown RBP7.02□□□□□ -1.29
USP39-214ENST00000474572 C9orf66Q5T8R8 295 aa7.02□□□□□ -1.29
USP39-214ENST00000474572 Q6ZTI0 123 aa7.02□□□□□ -1.29
USP39-214ENST00000474572 CEND1Q8N111 149 aa7.02□□□□□ -1.29
USP39-214ENST00000474572 ZNF479Q96JC4 524 aa7.02□□□□□ -1.29
USP39-214ENST00000474572 OPRPNQ99935 248 aaPredicted RBP7.02□□□□□ -1.29
USP39-214ENST00000474572 CITED1Q99966 193 aa7.02□□□□□ -1.29
USP39-214ENST00000474572 TIMM21Q9BVV7 248 aa7.02□□□□□ -1.29
USP39-214ENST00000474572 UBE2D4Q9Y2X8 147 aa7.02□□□□□ -1.29
USP39-214ENST00000474572 ACANP16112 2415 aa7.01□□□□□ -1.29
USP39-214ENST00000474572 TMEM223A0PJW6 202 aa7.01□□□□□ -1.29
USP39-214ENST00000474572 ZNF22P17026 224 aaPredicted RBP7.01□□□□□ -1.29
USP39-214ENST00000474572 FXYD2P54710 66 aa7.01□□□□□ -1.29
USP39-214ENST00000474572 MRPS36P82909 103 aaKnown RBP7.01□□□□□ -1.29
USP39-214ENST00000474572 UBE2V1Q13404 147 aa7.01□□□□□ -1.29
USP39-214ENST00000474572 COTL1Q14019 142 aa7.01□□□□□ -1.29
USP39-214ENST00000474572 RRN3P1Q2M238 152 aa7.01□□□□□ -1.29
USP39-214ENST00000474572 FASNP49327 2511 aaKnown RBP7□□□□□ -1.29
USP39-214ENST00000474572 C9orf118A6NHY6 69 aa7□□□□□ -1.29
USP39-214ENST00000474572 EMP1P54849 157 aa7□□□□□ -1.29
USP39-214ENST00000474572 UBE2D3P61077 147 aa7□□□□□ -1.29
USP39-214ENST00000474572 UBE2D2P62837 147 aa7□□□□□ -1.29
USP39-214ENST00000474572 LINC00612Q8N6U2 182 aa7□□□□□ -1.29
USP39-214ENST00000474572 PHLDA1Q8WV24 401 aaPredicted RBP7□□□□□ -1.29
USP39-214ENST00000474572 VCX2Q9H322 139 aa7□□□□□ -1.29
USP39-214ENST00000474572 NOP10Q9NPE3 64 aaKnown RBP7□□□□□ -1.29
USP39-214ENST00000474572 HIVEP2P31629 2446 aa7□□□□□ -1.29
USP39-214ENST00000474572 A0A1B0GWB2 263 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 TRBV6-4A0A1B0GX49 114 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 ZNF815PA8K554 130 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 LEPROTO15243 131 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 CCL25O15444 150 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 WIPF1O43516 503 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 GCSHP23434 173 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 TSPEAR-AS2P59090 65 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 RPL36AP83881 106 aaKnown RBP6.99□□□□□ -1.29
USP39-214ENST00000474572 TMEM170BQ5T4T1 132 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 DAZ4Q86SG3 579 aaKnown RBP6.99□□□□□ -1.29
USP39-214ENST00000474572 SBSPONQ8IVN8 264 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.99□□□□□ -1.29
USP39-214ENST00000474572 OR5A1Q8NGJ0 315 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 SPATA3Q8NHX4 192 aa6.99□□□□□ -1.29
USP39-214ENST00000474572 RPL36ALQ969Q0 106 aaKnown RBP6.99□□□□□ -1.29
USP39-214ENST00000474572 DAZ3Q9NR90 486 aaKnown RBP6.99□□□□□ -1.29
USP39-214ENST00000474572 SPANXB1Q9NS25 103 aaPredicted RBP6.99□□□□□ -1.29
USP39-214ENST00000474572 GCN1Q92616 2671 aaKnown RBP6.99□□□□□ -1.29
USP39-214ENST00000474572 IGHV3-38A0A0C4DH36 116 aa6.98□□□□□ -1.29
USP39-214ENST00000474572 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
USP39-214ENST00000474572 LINC00694P0DN24 101 aa6.98□□□□□ -1.29
USP39-214ENST00000474572 Q6ZUT4 128 aa6.98□□□□□ -1.29
USP39-214ENST00000474572 FAM19A3Q7Z5A8 133 aa6.98□□□□□ -1.29
USP39-214ENST00000474572 SLC25A29Q8N8R3 303 aa6.98□□□□□ -1.29
USP39-214ENST00000474572 KIR2DL5BQ8NHK3 375 aa6.98□□□□□ -1.29
USP39-214ENST00000474572 PLEKHB2Q96CS7 222 aa6.98□□□□□ -1.29
USP39-214ENST00000474572 GTSF1LQ9H1H1 148 aa6.98□□□□□ -1.29
USP39-214ENST00000474572 CSDC2Q9Y534 153 aaKnown RBP6.98□□□□□ -1.29
USP39-214ENST00000474572 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.97□□□□□ -1.29
USP39-214ENST00000474572 A0A0J9YY99 117 aa6.97□□□□□ -1.29
USP39-214ENST00000474572 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
USP39-214ENST00000474572 IGKV2-29A2NJV5 120 aaPredicted RBP6.97□□□□□ -1.29
USP39-214ENST00000474572 J3QQQ9 107 aa6.97□□□□□ -1.29
USP39-214ENST00000474572 K7EP13 123 aa6.97□□□□□ -1.29
USP39-214ENST00000474572 NTM-AS1Q6ZSK4 140 aa6.97□□□□□ -1.29
USP39-214ENST00000474572 WFDC9Q8NEX5 89 aa6.97□□□□□ -1.29
USP39-214ENST00000474572 X6R8D5 127 aa6.97□□□□□ -1.29
USP39-214ENST00000474572 WNK1Q9H4A3 2382 aa6.97□□□□□ -1.29
USP39-214ENST00000474572 OTOGQ6ZRI0 2925 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 IGLV5-45A0A087WSX0 123 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 GAGE12BA1L429 117 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 SMIM9A6NGZ8 99 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 GAGE7O76087 117 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 GAGE12FP0CL80 117 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 GAGE12GP0CL81 117 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 GAGE12IP0CL82 117 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 SMIM13P0DJ93 91 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 UBE2D1P51668 147 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 PTTG1IPP53801 180 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 VAMP3Q15836 100 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 CEMP1Q6PRD7 247 aaPredicted RBP6.96□□□□□ -1.3
USP39-214ENST00000474572 HIST1H4GQ99525 98 aa6.96□□□□□ -1.3
USP39-214ENST00000474572 TIRAPP58753 221 aa6.95□□□□□ -1.3
USP39-214ENST00000474572 FHL2Q14192 279 aa6.95□□□□□ -1.3
USP39-214ENST00000474572 AMMECR1LQ6DCA0 310 aa6.95□□□□□ -1.3
USP39-214ENST00000474572 NF1P21359 2839 aa6.95□□□□□ -1.3
USP39-214ENST00000474572 TRGV2A0A075B6R0 118 aa6.94□□□□□ -1.3
USP39-214ENST00000474572 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
USP39-214ENST00000474572 A0A1W2PPM0 123 aa6.94□□□□□ -1.3
USP39-214ENST00000474572 GAGE12JA6NER3 117 aa6.94□□□□□ -1.3
USP39-214ENST00000474572 H3BUT2 72 aa6.94□□□□□ -1.3
USP39-214ENST00000474572 H7C423 109 aa6.94□□□□□ -1.3
USP39-214ENST00000474572 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
USP39-214ENST00000474572 SMAGPQ0VAQ4 97 aa6.94□□□□□ -1.3
USP39-214ENST00000474572 GAGE4Q13068 117 aa6.94□□□□□ -1.3
USP39-214ENST00000474572 GAGE5Q13069 117 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms