RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 IGF1P05019 195 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 CRYGDP07320 174 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 ANXA2RQ3ZCQ2 193 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 KIF25-AS1Q9Y6Z4 181 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 CADP27708 2225 aa6.04□□□□□ -1.44
CCDC93-208ENST00000474546 AGRNO00468 2067 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 TMEM89A2RUT3 159 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 F5H697 171 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 CFAP161Q6P656 301 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 C2orf82Q6UX34 121 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 Q8N1Y9 231 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 RNF152Q8N8N0 203 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 PTH2Q96A98 100 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 RPL39LQ96EH5 51 aaKnown RBP6.03□□□□□ -1.44
CCDC93-208ENST00000474546 TIMM21Q9BVV7 248 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 DAZ1Q9NQZ3 744 aaKnown RBP6.03□□□□□ -1.44
CCDC93-208ENST00000474546 ZNF256Q9Y2P7 627 aaPredicted RBP6.03□□□□□ -1.44
CCDC93-208ENST00000474546 SELENOKQ9Y6D0 94 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 S4R3C0 116 aa6.03□□□□□ -1.44
CCDC93-208ENST00000474546 RNF223E7ERA6 249 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 IGHV3-23P01764 117 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 INAFM2P0DMQ5 153 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 RNASE3P12724 160 aaKnown RBP6.02□□□□□ -1.45
CCDC93-208ENST00000474546 ZNF22P17026 224 aaPredicted RBP6.02□□□□□ -1.45
CCDC93-208ENST00000474546 CXCL5P42830 114 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 SNRPD3P62318 126 aaKnown RBP6.02□□□□□ -1.45
CCDC93-208ENST00000474546 MIAQ16674 131 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 IGFL4Q6B9Z1 124 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 SUMO4Q6EEV6 95 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 C5orf56Q8N8D9 126 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 C20orf203Q8NBC4 194 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 AJUBAQ96IF1 538 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 C9orf85Q96MD7 179 aa6.02□□□□□ -1.45
CCDC93-208ENST00000474546 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
CCDC93-208ENST00000474546 NPFFO15130 113 aa6.01□□□□□ -1.45
CCDC93-208ENST00000474546 PF4P02776 101 aa6.01□□□□□ -1.45
CCDC93-208ENST00000474546 MRPS36P82909 103 aaKnown RBP6.01□□□□□ -1.45
CCDC93-208ENST00000474546 C19orf54Q5BKX5 351 aa6.01□□□□□ -1.45
CCDC93-208ENST00000474546 C11orf71Q6IPW1 123 aa6.01□□□□□ -1.45
CCDC93-208ENST00000474546 NTN5Q8WTR8 489 aaPredicted RBP6.01□□□□□ -1.45
CCDC93-208ENST00000474546 DNAJC30Q96LL9 226 aa6.01□□□□□ -1.45
CCDC93-208ENST00000474546 AMELXQ99217 191 aa6.01□□□□□ -1.45
CCDC93-208ENST00000474546 ICOSQ9Y6W8 199 aa6.01□□□□□ -1.45
CCDC93-208ENST00000474546 PLXNB1O43157 2135 aa6.01□□□□□ -1.45
CCDC93-208ENST00000474546 IGHV1-58A0A0C4DH39 117 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 LST1O00453 97 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 CCL21O00585 134 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 TSHBP01222 138 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 LINC00315P59091 139 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 ZNF415Q09FC8 603 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 DEFB113Q30KQ7 82 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 LINC00643Q86TS7 51 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 MUSTN1Q8IVN3 82 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 C15orf53Q8NAA6 179 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 KLHL30-AS1Q8NEE0 82 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 ARFGEF3Q5TH69 2177 aa6□□□□□ -1.45
CCDC93-208ENST00000474546 B5MCH6 92 aa5.99□□□□□ -1.45
CCDC93-208ENST00000474546 M0QY20 66 aa5.99□□□□□ -1.45
CCDC93-208ENST00000474546 SAA4P35542 130 aa5.99□□□□□ -1.45
CCDC93-208ENST00000474546 FHL3Q13643 280 aa5.99□□□□□ -1.45
CCDC93-208ENST00000474546 ZNF56Q15929 161 aa5.99□□□□□ -1.45
CCDC93-208ENST00000474546 FAM222AQ5U5X8 452 aa5.99□□□□□ -1.45
CCDC93-208ENST00000474546 ZNRF2Q8NHG8 242 aa5.99□□□□□ -1.45
CCDC93-208ENST00000474546 TRACP01848 142 aa5.98□□□□□ -1.45
CCDC93-208ENST00000474546 TIRAPP58753 221 aa5.98□□□□□ -1.45
CCDC93-208ENST00000474546 RPL11P62913 178 aaKnown RBP5.98□□□□□ -1.45
CCDC93-208ENST00000474546 TMEM95Q3KNT9 176 aa5.98□□□□□ -1.45
CCDC93-208ENST00000474546 PRR9Q5T870 116 aa5.98□□□□□ -1.45
CCDC93-208ENST00000474546 SFTA2Q6UW10 78 aa5.98□□□□□ -1.45
CCDC93-208ENST00000474546 DAND5Q8N907 189 aa5.98□□□□□ -1.45
CCDC93-208ENST00000474546 IGLV4-3A0A075B6K6 122 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 IGHV1OR15-1A0A075B7D0 117 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 IGHV3-16A0A0C4DH30 117 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 IGHV3-35A0A0C4DH35 117 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 LYNX1G3V0Z9 82 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 UQCRQO14949 82 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 TRIAP1O43715 76 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 IGHG2P01859 326 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 IGHV3-30-3P0DP02 117 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 LYNX1P0DP58 116 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 CD28P10747 220 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 HERV-K104P63124 156 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 Q6ZS46 218 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 TMEM61Q8N0U2 210 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 C20orf173Q96LM9 149 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 RHPN1-AS1Q9BWJ2 59 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 SS18L2Q9UHA2 77 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 NDUFA12Q9UI09 145 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 TNFRSF18Q9Y5U5 241 aa5.97□□□□□ -1.45
CCDC93-208ENST00000474546 TRAV4A0A0B4J268 109 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 IGHV3-66A0A0C4DH42 116 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 COX7A2LO14548 114 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 NDUFA1O15239 70 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 GNRH2O43555 120 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 PRSS2P07478 247 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 NHLRC4P0CG21 123 aaPredicted RBP5.96□□□□□ -1.46
CCDC93-208ENST00000474546 TSPEAR-AS2P59090 65 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 HERVK_113P63121 156 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 MEIG1Q5JSS6 88 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 KRTAP1-3Q8IUG1 177 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms