RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 COL4A2P08572 1712 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 DNAH12Q6ZR08 3092 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 DLEU1O43261 78 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 KRTAP10-9P60411 292 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 ZNF124Q15973 351 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 C10orf91Q5T1B1 145 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 LINC00336Q6ZUF6 198 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 DOCK7Q96N67 2140 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 HIST1H2BLQ99880 126 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 LIMD2Q9BT23 127 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 MYO15AQ9UKN7 3530 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 HEATR5AQ86XA9 2040 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 GVINP1Q7Z2Y8 2422 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 E9PLD3 99 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 RBM3P98179 157 aaKnown RBP3.41□□□□□ -1.86
CCNL1-215ENST00000474539 C1orf229Q6ZS94 237 aaPredicted RBP3.41□□□□□ -1.86
CCNL1-215ENST00000474539 CACNA1DQ01668 2161 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 A0A1B0GV72 72 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 COLCA2A8K830 154 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 C9JAW5 83 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 CFC1BP0CG36 223 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 CFC1P0CG37 223 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 BEAN1Q3B7T3 259 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 ZFAND6Q6FIF0 208 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 LINC00269Q8N2A0 174 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 ANKRD29Q8N6D5 301 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 DKK2Q9UBU2 259 aa3.41□□□□□ -1.86
CCNL1-215ENST00000474539 SPTBN2O15020 2390 aa3.4□□□□□ -1.86
CCNL1-215ENST00000474539 HIGD2BQ4VC39 106 aa3.4□□□□□ -1.86
CCNL1-215ENST00000474539 WFDC9Q8NEX5 89 aa3.4□□□□□ -1.86
CCNL1-215ENST00000474539 DCANP1Q8TF63 244 aa3.4□□□□□ -1.86
CCNL1-215ENST00000474539 ARID1AO14497 2285 aa3.4□□□□□ -1.86
CCNL1-215ENST00000474539 PLA2G1BP04054 148 aaKnown RBP3.4□□□□□ -1.86
CCNL1-215ENST00000474539 NEXN-AS1Q8NBZ9 246 aa3.4□□□□□ -1.86
CCNL1-215ENST00000474539 UBE2D4Q9Y2X8 147 aa3.4□□□□□ -1.86
CCNL1-215ENST00000474539 CREBBPQ92793 2442 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 NREPQ16612 68 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 OXLD1Q5BKU9 147 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 ASPHD1Q5U4P2 390 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 FAM19A1Q7Z5A9 133 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 Q8IZM0 81 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 CEND1Q8N111 149 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 IGLV10-54A0A075B6I4 117 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 TRBV27A0A0K0K1C4 114 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 PRAC2D3DTV9 90 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 F8W1H4 67 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 Q6JHZ5 121 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 GAGE2AQ6NT46 116 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 PPDPFLQ8WWR9 84 aa3.4□□□□□ -1.87
CCNL1-215ENST00000474539 CSDC2Q9Y534 153 aaKnown RBP3.4□□□□□ -1.87
CCNL1-215ENST00000474539 C22orf34Q6ZV56 151 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 SPTSSBQ8NFR3 76 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 ZNF625Q96I27 306 aaPredicted RBP3.39□□□□□ -1.87
CCNL1-215ENST00000474539 UPK3BQ9BT76 320 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 PRUNE2Q8WUY3 3088 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 NDUFS5O43920 106 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 UBE2D3P61077 147 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 UBE2D2P62837 147 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 RBX1P62877 108 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 CYYR1Q96J86 154 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 C11orf1Q9H5F2 150 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 ARHGAP21Q5T5U3 1957 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 PHF3Q92576 2039 aaKnown RBP3.39□□□□□ -1.87
CCNL1-215ENST00000474539 A0A1B0GUV1 79 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 WISP2O76076 250 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 SEC61GP60059 68 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 HIST1H4AP62805 103 aaKnown RBP3.39□□□□□ -1.87
CCNL1-215ENST00000474539 SPTBN1Q01082 2364 aaKnown RBP3.39□□□□□ -1.87
CCNL1-215ENST00000474539 AKAP6Q13023 2319 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 ZFHX2Q9C0A1 2572 aaPredicted RBP3.39□□□□□ -1.87
CCNL1-215ENST00000474539 hADV29S1A0JD25 119 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 H3BT86 120 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 DEFB4AO15263 64 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 NUPR1O60356 82 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 EDN2P20800 178 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 NPC2P61916 151 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 ODF3L2Q3SX64 289 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 ATP5EP2Q5VTU8 51 aa3.39□□□□□ -1.87
CCNL1-215ENST00000474539 DNAH14Q0VDD8 3507 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 A0A0J9YXV3 536 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 PYY3Q5JQD4 70 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 BAALCQ8WXS3 180 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 POLEQ07864 2286 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 AVPP01185 164 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 NANOS2P60321 138 aaKnown RBP3.38□□□□□ -1.87
CCNL1-215ENST00000474539 COA6Q5JTJ3 125 aaKnown RBP3.38□□□□□ -1.87
CCNL1-215ENST00000474539 C6orf223Q8N319 242 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 RPL39LQ96EH5 51 aaKnown RBP3.38□□□□□ -1.87
CCNL1-215ENST00000474539 TNRC18O15417 2968 aaPredicted RBP3.38□□□□□ -1.87
CCNL1-215ENST00000474539 KMT2EQ8IZD2 1858 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 A8MZ25 164 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 M0QY20 66 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 COX8CQ7Z4L0 72 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 ANKHD1Q8IWZ3 2542 aaKnown RBP3.38□□□□□ -1.87
CCNL1-215ENST00000474539 PTPRQQ9UMZ3 2332 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 IGKV2-24A0A0C4DH68 120 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 KRTAP24-1Q3LI83 254 aa3.38□□□□□ -1.87
CCNL1-215ENST00000474539 ACACBO00763 2458 aa3.37□□□□□ -1.87
CCNL1-215ENST00000474539 RPL37AP8A6NKH3 93 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms