RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 WFDC2Q14508 124 aa13.36□□□□□ -0.27
HLA-B-252ENST00000474381 RPL39LQ96EH5 51 aaKnown RBP13.36□□□□□ -0.27
HLA-B-252ENST00000474381 TRBV6-5A0A0K0K1A5 114 aa13.35□□□□□ -0.27
HLA-B-252ENST00000474381 NCR2O95944 276 aa13.35□□□□□ -0.27
HLA-B-252ENST00000474381 AMTP48728 403 aa13.35□□□□□ -0.27
HLA-B-252ENST00000474381 APOBP04114 4563 aaKnown RBP13.35□□□□□ -0.27
HLA-B-252ENST00000474381 SMIM27A0A1W2PRY6 76 aa13.34□□□□□ -0.27
HLA-B-252ENST00000474381 KRTAP10-1P60331 282 aa13.34□□□□□ -0.27
HLA-B-252ENST00000474381 BAALCQ8WXS3 180 aa13.34□□□□□ -0.27
HLA-B-252ENST00000474381 MRAP2Q96G30 205 aa13.34□□□□□ -0.27
HLA-B-252ENST00000474381 SDHAF1A6NFY7 115 aa13.33□□□□□ -0.28
HLA-B-252ENST00000474381 RNF185Q96GF1 192 aa13.33□□□□□ -0.28
HLA-B-252ENST00000474381 UBE2L6O14933 153 aa13.32□□□□□ -0.28
HLA-B-252ENST00000474381 LECT2O14960 151 aa13.32□□□□□ -0.28
HLA-B-252ENST00000474381 RAB4AP20338 218 aa13.32□□□□□ -0.28
HLA-B-252ENST00000474381 LINC00269Q8N2A0 174 aa13.32□□□□□ -0.28
HLA-B-252ENST00000474381 A0A1B0GW15 77 aa13.31□□□□□ -0.28
HLA-B-252ENST00000474381 C20orf203Q8NBC4 194 aa13.31□□□□□ -0.28
HLA-B-252ENST00000474381 REG3AQ06141 175 aa13.3□□□□□ -0.28
HLA-B-252ENST00000474381 CLLU1Q5K131 121 aa13.3□□□□□ -0.28
HLA-B-252ENST00000474381 AMN1Q8IY45 258 aa13.3□□□□□ -0.28
HLA-B-252ENST00000474381 ST20Q9HBF5 79 aa13.3□□□□□ -0.28
HLA-B-252ENST00000474381 H7C423 109 aa13.29□□□□□ -0.28
HLA-B-252ENST00000474381 I3L3M4 83 aa13.29□□□□□ -0.28
HLA-B-252ENST00000474381 PPP1R17O96001 155 aa13.29□□□□□ -0.28
HLA-B-252ENST00000474381 APCSP02743 223 aa13.29□□□□□ -0.28
HLA-B-252ENST00000474381 C14orf177Q52M58 125 aa13.29□□□□□ -0.28
HLA-B-252ENST00000474381 Q8N1X5 172 aa13.29□□□□□ -0.28
HLA-B-252ENST00000474381 DEFB104AQ8WTQ1 72 aa13.29□□□□□ -0.28
HLA-B-252ENST00000474381 TMEM70Q9BUB7 260 aa13.29□□□□□ -0.28
HLA-B-252ENST00000474381 IGLV4-60A0A075B6I1 120 aa13.28□□□□□ -0.28
HLA-B-252ENST00000474381 TRAV8-4A0A0B4J246 113 aa13.28□□□□□ -0.28
HLA-B-252ENST00000474381 PNRC1Q12796 327 aaPredicted RBP13.28□□□□□ -0.28
HLA-B-252ENST00000474381 CLPSL2Q6UWE3 100 aa13.28□□□□□ -0.28
HLA-B-252ENST00000474381 GAS8-AS1O95177 125 aa13.27□□□□□ -0.29
HLA-B-252ENST00000474381 PMCHP20382 165 aa13.27□□□□□ -0.29
HLA-B-252ENST00000474381 XGP55808 180 aa13.27□□□□□ -0.29
HLA-B-252ENST00000474381 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.26□□□□□ -0.29
HLA-B-252ENST00000474381 TRBV27A0A0K0K1C4 114 aa13.26□□□□□ -0.29
HLA-B-252ENST00000474381 PPP1R2P9O14990 202 aa13.26□□□□□ -0.29
HLA-B-252ENST00000474381 S100A8P05109 93 aa13.26□□□□□ -0.29
HLA-B-252ENST00000474381 RPS10P46783 165 aaKnown RBP13.26□□□□□ -0.29
HLA-B-252ENST00000474381 POLR2KP53803 58 aaKnown RBP13.26□□□□□ -0.29
HLA-B-252ENST00000474381 FAM104BQ5XKR9 115 aa13.26□□□□□ -0.29
HLA-B-252ENST00000474381 KRTAP26-1Q6PEX3 210 aa13.26□□□□□ -0.29
HLA-B-252ENST00000474381 KRTAP17-1Q9BYP8 105 aa13.25□□□□□ -0.29
HLA-B-252ENST00000474381 PCLOQ9Y6V0 5065 aa13.25□□□□□ -0.29
HLA-B-252ENST00000474381 HLA-DQA1P01909 254 aa13.24□□□□□ -0.29
HLA-B-252ENST00000474381 CAMPP49913 170 aa13.24□□□□□ -0.29
HLA-B-252ENST00000474381 AMMECR1LQ6DCA0 310 aa13.24□□□□□ -0.29
HLA-B-252ENST00000474381 LINC00862A6NCI5 91 aa13.23□□□□□ -0.29
HLA-B-252ENST00000474381 USP17L23D6RBM5 183 aa13.23□□□□□ -0.29
HLA-B-252ENST00000474381 TSHBP01222 138 aa13.23□□□□□ -0.29
HLA-B-252ENST00000474381 ESDP10768 282 aa13.23□□□□□ -0.29
HLA-B-252ENST00000474381 ZNF25P17030 456 aaPredicted RBP13.23□□□□□ -0.29
HLA-B-252ENST00000474381 HBBP68871 147 aa13.23□□□□□ -0.29
HLA-B-252ENST00000474381 NRACQ8N912 160 aa13.23□□□□□ -0.29
HLA-B-252ENST00000474381 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.22□□□□□ -0.29
HLA-B-252ENST00000474381 A0A1B0GXF2 115 aa13.22□□□□□ -0.29
HLA-B-252ENST00000474381 IGKV2-29A2NJV5 120 aaPredicted RBP13.22□□□□□ -0.29
HLA-B-252ENST00000474381 F8W036 122 aa13.22□□□□□ -0.29
HLA-B-252ENST00000474381 VCYO14598 125 aa13.22□□□□□ -0.29
HLA-B-252ENST00000474381 FGF6P10767 208 aa13.22□□□□□ -0.29
HLA-B-252ENST00000474381 IFITM2Q01629 132 aa13.22□□□□□ -0.29
HLA-B-252ENST00000474381 MRPL51Q4U2R6 128 aaKnown RBP13.22□□□□□ -0.29
HLA-B-252ENST00000474381 ATP5L2Q7Z4Y8 100 aa13.22□□□□□ -0.29
HLA-B-252ENST00000474381 KRTAP4-5Q9BYR2 181 aa13.22□□□□□ -0.29
HLA-B-252ENST00000474381 TMEM242Q9NWH2 141 aa13.22□□□□□ -0.29
HLA-B-252ENST00000474381 IGLV10-54A0A075B6I4 117 aa13.21□□□□□ -0.29
HLA-B-252ENST00000474381 SMKR1H3BMG3 65 aa13.21□□□□□ -0.29
HLA-B-252ENST00000474381 SUMO2P61956 95 aaKnown RBP13.21□□□□□ -0.29
HLA-B-252ENST00000474381 MRPL54Q6P161 138 aaKnown RBP13.21□□□□□ -0.29
HLA-B-252ENST00000474381 MT-ND4LP03901 98 aa13.2□□□□□ -0.3
HLA-B-252ENST00000474381 RNASEKQ6P5S7 137 aaKnown RBP13.2□□□□□ -0.3
HLA-B-252ENST00000474381 UQCC3Q6UW78 93 aa13.2□□□□□ -0.3
HLA-B-252ENST00000474381 Q6ZSA8 131 aa13.2□□□□□ -0.3
HLA-B-252ENST00000474381 ANAPC16Q96DE5 110 aa13.2□□□□□ -0.3
HLA-B-252ENST00000474381 TRBV24-1A0A075B6N3 115 aa13.19□□□□□ -0.3
HLA-B-252ENST00000474381 BTF3L4Q96K17 158 aa13.19□□□□□ -0.3
HLA-B-252ENST00000474381 C20orf78Q9BR46 151 aa13.19□□□□□ -0.3
HLA-B-252ENST00000474381 C7orf77A4D0Y5 90 aa13.18□□□□□ -0.3
HLA-B-252ENST00000474381 CKS2P33552 79 aa13.18□□□□□ -0.3
HLA-B-252ENST00000474381 RPL32P62910 135 aaKnown RBP13.18□□□□□ -0.3
HLA-B-252ENST00000474381 MRPL52Q86TS9 123 aaKnown RBP13.18□□□□□ -0.3
HLA-B-252ENST00000474381 CLRN3Q8NCR9 226 aa13.18□□□□□ -0.3
HLA-B-252ENST00000474381 TMEM101Q96IK0 257 aa13.18□□□□□ -0.3
HLA-B-252ENST00000474381 KIR2DL4Q99706 377 aa13.18□□□□□ -0.3
HLA-B-252ENST00000474381 PPBPP02775 128 aa13.17□□□□□ -0.3
HLA-B-252ENST00000474381 FCER1GP30273 86 aa13.17□□□□□ -0.3
HLA-B-252ENST00000474381 DGAT2L7PQ6IED9 249 aa13.17□□□□□ -0.3
HLA-B-252ENST00000474381 FAM30AQ9NZY2 134 aa13.17□□□□□ -0.3
HLA-B-252ENST00000474381 PRSS1P07477 247 aa13.16□□□□□ -0.3
HLA-B-252ENST00000474381 EPM2AB3EWF7 344 aa13.15□□□□□ -0.3
HLA-B-252ENST00000474381 PHOX2AO14813 284 aa13.15□□□□□ -0.3
HLA-B-252ENST00000474381 TCAPO15273 167 aa13.15□□□□□ -0.3
HLA-B-252ENST00000474381 SMAGPQ0VAQ4 97 aa13.15□□□□□ -0.3
HLA-B-252ENST00000474381 OR5A1Q8NGJ0 315 aa13.15□□□□□ -0.3
HLA-B-252ENST00000474381 D6R8Y8 96 aa13.14□□□□□ -0.31
HLA-B-252ENST00000474381 TNFRSF6BO95407 300 aa13.14□□□□□ -0.31
HLA-B-252ENST00000474381 LINC01620Q4KN68 170 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms