RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 GAGE12HA6NDE8 117 aa7.2□□□□□ -1.26
EXOSC1-207ENST00000474309 SRSF9Q13242 221 aaKnown RBP eCLIP7.2□□□□□ -1.26
EXOSC1-207ENST00000474309 COTL1Q14019 142 aa7.2□□□□□ -1.26
EXOSC1-207ENST00000474309 REG3GQ6UW15 175 aa7.2□□□□□ -1.26
EXOSC1-207ENST00000474309 LINC00474Q9P2X8 69 aa7.2□□□□□ -1.26
EXOSC1-207ENST00000474309 XKRY2A2RUG3 117 aa7.19□□□□□ -1.26
EXOSC1-207ENST00000474309 G3V3Q6 166 aa7.19□□□□□ -1.26
EXOSC1-207ENST00000474309 TRGC1P0CF51 173 aa7.19□□□□□ -1.26
EXOSC1-207ENST00000474309 RPL35P42766 123 aaKnown RBP7.19□□□□□ -1.26
EXOSC1-207ENST00000474309 AMTP48728 403 aa7.19□□□□□ -1.26
EXOSC1-207ENST00000474309 KCNRGQ8N5I3 272 aa7.19□□□□□ -1.26
EXOSC1-207ENST00000474309 PKIGQ9Y2B9 76 aa7.19□□□□□ -1.26
EXOSC1-207ENST00000474309 GVQW2A0A096LPI5 108 aaPredicted RBP7.18□□□□□ -1.26
EXOSC1-207ENST00000474309 IGKV2-24A0A0C4DH68 120 aa7.18□□□□□ -1.26
EXOSC1-207ENST00000474309 C19orf71A6NCJ1 209 aa7.18□□□□□ -1.26
EXOSC1-207ENST00000474309 H7C423 109 aa7.18□□□□□ -1.26
EXOSC1-207ENST00000474309 ARPC5O15511 151 aa7.18□□□□□ -1.26
EXOSC1-207ENST00000474309 OR2D3Q8NGH3 330 aa7.18□□□□□ -1.26
EXOSC1-207ENST00000474309 SMIM12Q96EX1 92 aa7.18□□□□□ -1.26
EXOSC1-207ENST00000474309 TPPP3Q9BW30 176 aa7.18□□□□□ -1.26
EXOSC1-207ENST00000474309 H2AFB1P0C5Y9 115 aa7.17□□□□□ -1.26
EXOSC1-207ENST00000474309 NTF3P20783 257 aa7.17□□□□□ -1.26
EXOSC1-207ENST00000474309 HIGD2BQ4VC39 106 aa7.17□□□□□ -1.26
EXOSC1-207ENST00000474309 C9orf62Q8N4C0 152 aa7.17□□□□□ -1.26
EXOSC1-207ENST00000474309 LYPD6BQ8NI32 183 aa7.17□□□□□ -1.26
EXOSC1-207ENST00000474309 FAM213BQ8TBF2 198 aa7.17□□□□□ -1.26
EXOSC1-207ENST00000474309 CHCHD10Q8WYQ3 142 aaPredicted RBP7.17□□□□□ -1.26
EXOSC1-207ENST00000474309 C11orf52Q96A22 123 aa7.17□□□□□ -1.26
EXOSC1-207ENST00000474309 A0A096LNI7 61 aa7.16□□□□□ -1.26
EXOSC1-207ENST00000474309 NCR2O95944 276 aa7.16□□□□□ -1.26
EXOSC1-207ENST00000474309 ODF1Q14990 250 aa7.16□□□□□ -1.26
EXOSC1-207ENST00000474309 LYZL1Q6UWQ5 148 aa7.16□□□□□ -1.26
EXOSC1-207ENST00000474309 Q6ZRP5 223 aa7.16□□□□□ -1.26
EXOSC1-207ENST00000474309 IGKV3OR2-268A0A0C4DH90 116 aa7.15□□□□□ -1.26
EXOSC1-207ENST00000474309 A0A1B0GV50 99 aa7.15□□□□□ -1.26
EXOSC1-207ENST00000474309 IFNA1P01562 189 aa7.15□□□□□ -1.26
EXOSC1-207ENST00000474309 CCL20P78556 96 aa7.15□□□□□ -1.26
EXOSC1-207ENST00000474309 ZNF345Q14585 488 aa7.15□□□□□ -1.26
EXOSC1-207ENST00000474309 AMMECR1LQ6DCA0 310 aa7.15□□□□□ -1.26
EXOSC1-207ENST00000474309 MANBALQ9NQG1 85 aa7.15□□□□□ -1.26
EXOSC1-207ENST00000474309 BIN3Q9NQY0 253 aa7.15□□□□□ -1.26
EXOSC1-207ENST00000474309 FOXI1Q12951 378 aa7.14□□□□□ -1.27
EXOSC1-207ENST00000474309 CENPWQ5EE01 88 aa7.14□□□□□ -1.27
EXOSC1-207ENST00000474309 GATD1Q8NB37 220 aa7.14□□□□□ -1.27
EXOSC1-207ENST00000474309 OR5A1Q8NGJ0 315 aa7.14□□□□□ -1.27
EXOSC1-207ENST00000474309 CNFNQ9BYD5 112 aa7.14□□□□□ -1.27
EXOSC1-207ENST00000474309 TRAV1-1A0A0B4J248 108 aa7.13□□□□□ -1.27
EXOSC1-207ENST00000474309 IGHV1-58A0A0C4DH39 117 aa7.13□□□□□ -1.27
EXOSC1-207ENST00000474309 GAS8-AS1O95177 125 aa7.13□□□□□ -1.27
EXOSC1-207ENST00000474309 ZNF25P17030 456 aaPredicted RBP7.13□□□□□ -1.27
EXOSC1-207ENST00000474309 EIF5AP63241 154 aaKnown RBP7.13□□□□□ -1.27
EXOSC1-207ENST00000474309 RNASEKQ6P5S7 137 aaKnown RBP7.13□□□□□ -1.27
EXOSC1-207ENST00000474309 HMSDA8MTL9 139 aa7.12□□□□□ -1.27
EXOSC1-207ENST00000474309 FGF6P10767 208 aa7.12□□□□□ -1.27
EXOSC1-207ENST00000474309 GNG4P50150 75 aa7.12□□□□□ -1.27
EXOSC1-207ENST00000474309 TEX261Q6UWH6 196 aa7.12□□□□□ -1.27
EXOSC1-207ENST00000474309 Q6ZNX1 250 aa7.12□□□□□ -1.27
EXOSC1-207ENST00000474309 FAM210AQ96ND0 272 aa7.12□□□□□ -1.27
EXOSC1-207ENST00000474309 LINC00959A0A1B0GUT2 108 aa7.11□□□□□ -1.27
EXOSC1-207ENST00000474309 RAB19A4D1S5 217 aa7.11□□□□□ -1.27
EXOSC1-207ENST00000474309 CTRLP40313 264 aa7.11□□□□□ -1.27
EXOSC1-207ENST00000474309 TWIST1Q15672 202 aa7.11□□□□□ -1.27
EXOSC1-207ENST00000474309 NUDT10Q8NFP7 164 aa7.11□□□□□ -1.27
EXOSC1-207ENST00000474309 NUDT11Q96G61 164 aa7.11□□□□□ -1.27
EXOSC1-207ENST00000474309 CARD19Q96LW7 228 aa7.11□□□□□ -1.27
EXOSC1-207ENST00000474309 GNG13Q9P2W3 67 aa7.11□□□□□ -1.27
EXOSC1-207ENST00000474309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.1□□□□□ -1.27
EXOSC1-207ENST00000474309 KANTRA0A1W2PQU2 76 aa7.1□□□□□ -1.27
EXOSC1-207ENST00000474309 IGKV2-29A2NJV5 120 aaPredicted RBP7.1□□□□□ -1.27
EXOSC1-207ENST00000474309 PDE6DO43924 150 aa7.1□□□□□ -1.27
EXOSC1-207ENST00000474309 APCSP02743 223 aa7.1□□□□□ -1.27
EXOSC1-207ENST00000474309 SYCNQ0VAF6 134 aa7.1□□□□□ -1.27
EXOSC1-207ENST00000474309 TMEM101Q96IK0 257 aa7.1□□□□□ -1.27
EXOSC1-207ENST00000474309 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
EXOSC1-207ENST00000474309 BATF3Q9NR55 127 aa7.1□□□□□ -1.27
EXOSC1-207ENST00000474309 TRAV26-2A0A0B4J265 109 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 FAM231BA6NCW3 169 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 SDHAF1A6NFY7 115 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 TEX46H3BTG2 121 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 ZNF561-AS1K7EIQ3 104 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 CCL25O15444 150 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 BCL2L11O43521 198 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 XCL1P47992 114 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 PTTG1IPP53801 180 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 CD164L2Q6UWJ8 174 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 SMIM15Q7Z3B0 74 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 MED9Q9NWA0 146 aa7.09□□□□□ -1.27
EXOSC1-207ENST00000474309 TRBV20OR9-2A0A075B6H5 130 aa7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 TRBV6-5A0A0K0K1A5 114 aa7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 LOC107984640A0A0U1RRK4 108 aa7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 SMLR1H3BR10 107 aa7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 I3L3M4 83 aa7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 ESDP10768 282 aa7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 PMCHP20382 165 aa7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 MEF2BQ02080 365 aaPredicted RBP7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 SS18Q15532 418 aa7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 ISOC2Q96AB3 205 aa7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 RPL39LQ96EH5 51 aaKnown RBP7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 LINC00526Q96FQ7 95 aa7.08□□□□□ -1.28
EXOSC1-207ENST00000474309 EIF5AL1Q6IS14 154 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms