RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CTDSP1Q9GZU7 261 aa9.24□□□□□ -0.93
USF1-205ENST00000473969 APCSP02743 223 aa9.23□□□□□ -0.93
USF1-205ENST00000473969 ADCYAP1P18509 176 aa9.23□□□□□ -0.93
USF1-205ENST00000473969 CKS2P33552 79 aa9.23□□□□□ -0.93
USF1-205ENST00000473969 MPV17L2Q567V2 206 aa9.23□□□□□ -0.93
USF1-205ENST00000473969 IGKV2D-24A0A075B6R9 120 aa9.22□□□□□ -0.93
USF1-205ENST00000473969 SMKR1H3BMG3 65 aa9.22□□□□□ -0.93
USF1-205ENST00000473969 MRPL51Q4U2R6 128 aaKnown RBP9.22□□□□□ -0.93
USF1-205ENST00000473969 SPATA12Q7Z6I5 190 aa9.22□□□□□ -0.93
USF1-205ENST00000473969 Q8N976 141 aa9.22□□□□□ -0.93
USF1-205ENST00000473969 BTF3L4Q96K17 158 aa9.22□□□□□ -0.93
USF1-205ENST00000473969 PCLOQ9Y6V0 5065 aa9.21□□□□□ -0.93
USF1-205ENST00000473969 A0A087WTM6 91 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 A0A1B0GXF2 115 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 VCYO14598 125 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 S100PP25815 95 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 FCER1GP30273 86 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 RBX1P62877 108 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 AMMECR1LQ6DCA0 310 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 IMMP2LQ96T52 175 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 TMEM70Q9BUB7 260 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 C1orf43Q9BWL3 253 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 FRAS1Q86XX4 4008 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 DNAH17Q9UFH2 4485 aa9.21□□□□□ -0.94
USF1-205ENST00000473969 C16orf90A8MZG2 172 aa9.2□□□□□ -0.94
USF1-205ENST00000473969 GAS8-AS1O95177 125 aa9.2□□□□□ -0.94
USF1-205ENST00000473969 PPBPP02775 128 aa9.2□□□□□ -0.94
USF1-205ENST00000473969 RPS10P46783 165 aaKnown RBP9.2□□□□□ -0.94
USF1-205ENST00000473969 NDUFA5Q16718 116 aa9.2□□□□□ -0.94
USF1-205ENST00000473969 KIR2DL4Q99706 377 aa9.2□□□□□ -0.94
USF1-205ENST00000473969 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
USF1-205ENST00000473969 A0A1B0GUV1 79 aa9.19□□□□□ -0.94
USF1-205ENST00000473969 H7C423 109 aa9.19□□□□□ -0.94
USF1-205ENST00000473969 POLR2KP53803 58 aaKnown RBP9.19□□□□□ -0.94
USF1-205ENST00000473969 SUMO2P61956 95 aaKnown RBP9.19□□□□□ -0.94
USF1-205ENST00000473969 TRBV27A0A0K0K1C4 114 aa9.18□□□□□ -0.94
USF1-205ENST00000473969 D6R8Y8 96 aa9.18□□□□□ -0.94
USF1-205ENST00000473969 MIAQ16674 131 aa9.18□□□□□ -0.94
USF1-205ENST00000473969 RNASEKQ6P5S7 137 aaKnown RBP9.18□□□□□ -0.94
USF1-205ENST00000473969 ORMDL3Q8N138 153 aa9.18□□□□□ -0.94
USF1-205ENST00000473969 LINC00269Q8N2A0 174 aa9.18□□□□□ -0.94
USF1-205ENST00000473969 NRACQ8N912 160 aa9.18□□□□□ -0.94
USF1-205ENST00000473969 TMEM101Q96IK0 257 aa9.18□□□□□ -0.94
USF1-205ENST00000473969 C20orf78Q9BR46 151 aa9.18□□□□□ -0.94
USF1-205ENST00000473969 TMEM242Q9NWH2 141 aa9.18□□□□□ -0.94
USF1-205ENST00000473969 CARHSP1Q9Y2V2 147 aaKnown RBP9.18□□□□□ -0.94
USF1-205ENST00000473969 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.17□□□□□ -0.94
USF1-205ENST00000473969 TRAV9-1A0A075B6T8 112 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 IGKV2-29A2NJV5 120 aaPredicted RBP9.17□□□□□ -0.94
USF1-205ENST00000473969 TCAPO15273 167 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 TNFRSF6BO95407 300 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 REG3AQ06141 175 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 SMAGPQ0VAQ4 97 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 RHEBQ15382 184 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 C10orf91Q5T1B1 145 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 CLPSL2Q6UWE3 100 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 ENHOQ6UWT2 76 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 RPS10P5Q9NQ39 176 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 RYR1P21817 5038 aa9.17□□□□□ -0.94
USF1-205ENST00000473969 TRBV24-1A0A075B6N3 115 aa9.16□□□□□ -0.94
USF1-205ENST00000473969 C7orf77A4D0Y5 90 aa9.16□□□□□ -0.94
USF1-205ENST00000473969 PHOX2AO14813 284 aa9.16□□□□□ -0.94
USF1-205ENST00000473969 TSHBP01222 138 aa9.16□□□□□ -0.94
USF1-205ENST00000473969 CDPF1Q6NVV7 123 aa9.16□□□□□ -0.94
USF1-205ENST00000473969 CLRN3Q8NCR9 226 aa9.16□□□□□ -0.94
USF1-205ENST00000473969 TMEM18Q96B42 140 aa9.16□□□□□ -0.94
USF1-205ENST00000473969 PRELID3AQ96N28 172 aa9.16□□□□□ -0.94
USF1-205ENST00000473969 FAT2Q9NYQ8 4349 aa9.15□□□□□ -0.94
USF1-205ENST00000473969 IGLV4-60A0A075B6I1 120 aa9.15□□□□□ -0.94
USF1-205ENST00000473969 LRCOL1A6NCL2 159 aa9.15□□□□□ -0.94
USF1-205ENST00000473969 APOC3P02656 99 aa9.15□□□□□ -0.94
USF1-205ENST00000473969 FGF6P10767 208 aa9.15□□□□□ -0.94
USF1-205ENST00000473969 ZNF25P17030 456 aaPredicted RBP9.15□□□□□ -0.94
USF1-205ENST00000473969 DGAT2L7PQ6IED9 249 aa9.15□□□□□ -0.94
USF1-205ENST00000473969 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.94
USF1-205ENST00000473969 PRR34Q9NV39 138 aa9.15□□□□□ -0.94
USF1-205ENST00000473969 TRAV8-4A0A0B4J246 113 aa9.14□□□□□ -0.95
USF1-205ENST00000473969 KRTAP10-2P60368 255 aa9.14□□□□□ -0.95
USF1-205ENST00000473969 RPL32P62910 135 aaKnown RBP9.14□□□□□ -0.95
USF1-205ENST00000473969 OR5A1Q8NGJ0 315 aa9.14□□□□□ -0.95
USF1-205ENST00000473969 NTN5Q8WTR8 489 aaPredicted RBP9.14□□□□□ -0.95
USF1-205ENST00000473969 BAALCQ8WXS3 180 aa9.14□□□□□ -0.95
USF1-205ENST00000473969 LAMTOR2Q9Y2Q5 125 aa9.14□□□□□ -0.95
USF1-205ENST00000473969 HECTD4Q9Y4D8 3996 aa9.14□□□□□ -0.95
USF1-205ENST00000473969 LECT2O14960 151 aa9.13□□□□□ -0.95
USF1-205ENST00000473969 SNAPINO95295 136 aa9.13□□□□□ -0.95
USF1-205ENST00000473969 NPYP01303 97 aa9.13□□□□□ -0.95
USF1-205ENST00000473969 HLA-DQA1P01909 254 aa9.13□□□□□ -0.95
USF1-205ENST00000473969 ESDP10768 282 aa9.13□□□□□ -0.95
USF1-205ENST00000473969 RAB5AP20339 215 aa9.13□□□□□ -0.95
USF1-205ENST00000473969 SVBPQ8N300 66 aa9.13□□□□□ -0.95
USF1-205ENST00000473969 Q8N814 137 aa9.13□□□□□ -0.95
USF1-205ENST00000473969 SMIM2Q9BVW6 85 aa9.13□□□□□ -0.95
USF1-205ENST00000473969 IGLV5-52A0A0A0MRZ9 124 aa9.12□□□□□ -0.95
USF1-205ENST00000473969 IGKV3OR2-268A0A0C4DH90 116 aa9.12□□□□□ -0.95
USF1-205ENST00000473969 COX19Q49B96 90 aa9.12□□□□□ -0.95
USF1-205ENST00000473969 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
USF1-205ENST00000473969 MAP1LC3AQ9H492 121 aa9.12□□□□□ -0.95
USF1-205ENST00000473969 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms