RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 NCR2O95944 276 aa12.07□□□□□ -0.48
SNX4-204ENST00000473417 RPS10P46783 165 aaKnown RBP12.07□□□□□ -0.48
SNX4-204ENST00000473417 GAGE6Q13070 117 aa12.07□□□□□ -0.48
SNX4-204ENST00000473417 COTL1Q14019 142 aa12.07□□□□□ -0.48
SNX4-204ENST00000473417 IQCJQ1A5X6 159 aa12.07□□□□□ -0.48
SNX4-204ENST00000473417 FAM104BQ5XKR9 115 aa12.07□□□□□ -0.48
SNX4-204ENST00000473417 KLK12Q9UKR0 248 aa12.07□□□□□ -0.48
SNX4-204ENST00000473417 SDHAF1A6NFY7 115 aa12.06□□□□□ -0.48
SNX4-204ENST00000473417 S100A8P05109 93 aa12.06□□□□□ -0.48
SNX4-204ENST00000473417 MRPL51Q4U2R6 128 aaKnown RBP12.06□□□□□ -0.48
SNX4-204ENST00000473417 MPV17L2Q567V2 206 aa12.06□□□□□ -0.48
SNX4-204ENST00000473417 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
SNX4-204ENST00000473417 ST20Q9HBF5 79 aa12.06□□□□□ -0.48
SNX4-204ENST00000473417 TRBV6-5A0A0K0K1A5 114 aa12.05□□□□□ -0.48
SNX4-204ENST00000473417 LAGE3Q14657 143 aa12.05□□□□□ -0.48
SNX4-204ENST00000473417 ATRAIDQ6UW56 229 aa12.05□□□□□ -0.48
SNX4-204ENST00000473417 TMEM243Q9BU79 118 aa12.05□□□□□ -0.48
SNX4-204ENST00000473417 AMTP48728 403 aa12.04□□□□□ -0.48
SNX4-204ENST00000473417 ELOBQ15370 118 aa12.04□□□□□ -0.48
SNX4-204ENST00000473417 ATP5L2Q7Z4Y8 100 aa12.04□□□□□ -0.48
SNX4-204ENST00000473417 Q8N976 141 aa12.04□□□□□ -0.48
SNX4-204ENST00000473417 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
SNX4-204ENST00000473417 PMCHP20382 165 aa12.03□□□□□ -0.48
SNX4-204ENST00000473417 PKIAP61925 76 aa12.03□□□□□ -0.48
SNX4-204ENST00000473417 C10orf91Q5T1B1 145 aa12.03□□□□□ -0.48
SNX4-204ENST00000473417 CTDSP1Q9GZU7 261 aa12.03□□□□□ -0.48
SNX4-204ENST00000473417 LRCOL1A6NCL2 159 aa12.02□□□□□ -0.49
SNX4-204ENST00000473417 I3L3M4 83 aa12.02□□□□□ -0.49
SNX4-204ENST00000473417 PSCAO43653 123 aa12.02□□□□□ -0.49
SNX4-204ENST00000473417 ANGP03950 147 aaKnown RBP12.02□□□□□ -0.49
SNX4-204ENST00000473417 RBX1P62877 108 aa12.02□□□□□ -0.49
SNX4-204ENST00000473417 NRACQ8N912 160 aa12.02□□□□□ -0.49
SNX4-204ENST00000473417 UBE2WQ96B02 151 aa12.02□□□□□ -0.49
SNX4-204ENST00000473417 TMEM70Q9BUB7 260 aa12.02□□□□□ -0.49
SNX4-204ENST00000473417 CARHSP1Q9Y2V2 147 aaKnown RBP12.02□□□□□ -0.49
SNX4-204ENST00000473417 PPP1R17O96001 155 aa12.01□□□□□ -0.49
SNX4-204ENST00000473417 CKS2P33552 79 aa12.01□□□□□ -0.49
SNX4-204ENST00000473417 XGP55808 180 aa12.01□□□□□ -0.49
SNX4-204ENST00000473417 KRTAP10-1P60331 282 aa12.01□□□□□ -0.49
SNX4-204ENST00000473417 BTF3L4Q96K17 158 aa12.01□□□□□ -0.49
SNX4-204ENST00000473417 UBE2L6O14933 153 aa12□□□□□ -0.49
SNX4-204ENST00000473417 APCSP02743 223 aa12□□□□□ -0.49
SNX4-204ENST00000473417 POLR2KP53803 58 aaKnown RBP12□□□□□ -0.49
SNX4-204ENST00000473417 IMMP2LQ96T52 175 aa12□□□□□ -0.49
SNX4-204ENST00000473417 TM2D2Q9BX73 214 aa12□□□□□ -0.49
SNX4-204ENST00000473417 TMEM242Q9NWH2 141 aa12□□□□□ -0.49
SNX4-204ENST00000473417 C7orf77A4D0Y5 90 aa11.99□□□□□ -0.49
SNX4-204ENST00000473417 D6R8Y8 96 aa11.99□□□□□ -0.49
SNX4-204ENST00000473417 SUMO2P61956 95 aaKnown RBP11.99□□□□□ -0.49
SNX4-204ENST00000473417 ENHOQ6UWT2 76 aa11.99□□□□□ -0.49
SNX4-204ENST00000473417 CLRN3Q8NCR9 226 aa11.99□□□□□ -0.49
SNX4-204ENST00000473417 FAT1Q14517 4588 aa11.99□□□□□ -0.49
SNX4-204ENST00000473417 IGKV2D-24A0A075B6R9 120 aa11.98□□□□□ -0.49
SNX4-204ENST00000473417 TRBV27A0A0K0K1C4 114 aa11.98□□□□□ -0.49
SNX4-204ENST00000473417 EPM2AB3EWF7 344 aa11.98□□□□□ -0.49
SNX4-204ENST00000473417 VCYO14598 125 aa11.98□□□□□ -0.49
SNX4-204ENST00000473417 TSHBP01222 138 aa11.98□□□□□ -0.49
SNX4-204ENST00000473417 CRPP02741 224 aa11.98□□□□□ -0.49
SNX4-204ENST00000473417 RPS10P5Q9NQ39 176 aa11.98□□□□□ -0.49
SNX4-204ENST00000473417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.97□□□□□ -0.49
SNX4-204ENST00000473417 IGKV2-29A2NJV5 120 aaPredicted RBP11.97□□□□□ -0.49
SNX4-204ENST00000473417 TNFRSF6BO95407 300 aa11.97□□□□□ -0.49
SNX4-204ENST00000473417 GCSHP23434 173 aa11.97□□□□□ -0.49
SNX4-204ENST00000473417 Q0VG73 95 aa11.97□□□□□ -0.49
SNX4-204ENST00000473417 CLPSL2Q6UWE3 100 aa11.97□□□□□ -0.49
SNX4-204ENST00000473417 LINC00269Q8N2A0 174 aa11.97□□□□□ -0.49
SNX4-204ENST00000473417 C20orf203Q8NBC4 194 aa11.97□□□□□ -0.49
SNX4-204ENST00000473417 NTN5Q8WTR8 489 aaPredicted RBP11.97□□□□□ -0.49
SNX4-204ENST00000473417 RMI2Q96E14 147 aa11.97□□□□□ -0.49
SNX4-204ENST00000473417 IGLV4-60A0A075B6I1 120 aa11.96□□□□□ -0.49
SNX4-204ENST00000473417 A0A1B0GUV1 79 aa11.96□□□□□ -0.49
SNX4-204ENST00000473417 APOC3P02656 99 aa11.96□□□□□ -0.49
SNX4-204ENST00000473417 Q8N814 137 aa11.96□□□□□ -0.49
SNX4-204ENST00000473417 VPS13BQ7Z7G8 4022 aa11.96□□□□□ -0.5
SNX4-204ENST00000473417 TRBV24-1A0A075B6N3 115 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 IGLV5-52A0A0A0MRZ9 124 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 NPYP01303 97 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 PPBPP02775 128 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 S100PP25815 95 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 RHEBQ15382 184 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 AMMECR1LQ6DCA0 310 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 TMEM136Q6ZRR5 245 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 ORMDL3Q8N138 153 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 C20orf78Q9BR46 151 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 COX11Q9Y6N1 276 aa11.95□□□□□ -0.5
SNX4-204ENST00000473417 ESDP10768 282 aa11.94□□□□□ -0.5
SNX4-204ENST00000473417 FCER1GP30273 86 aa11.94□□□□□ -0.5
SNX4-204ENST00000473417 NDUFA5Q16718 116 aa11.94□□□□□ -0.5
SNX4-204ENST00000473417 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
SNX4-204ENST00000473417 KIR2DL4Q99706 377 aa11.94□□□□□ -0.5
SNX4-204ENST00000473417 C1orf43Q9BWL3 253 aa11.94□□□□□ -0.5
SNX4-204ENST00000473417 PRR34Q9NV39 138 aa11.94□□□□□ -0.5
SNX4-204ENST00000473417 TRAV9-1A0A075B6T8 112 aa11.93□□□□□ -0.5
SNX4-204ENST00000473417 H7C423 109 aa11.93□□□□□ -0.5
SNX4-204ENST00000473417 FGF6P10767 208 aa11.93□□□□□ -0.5
SNX4-204ENST00000473417 REG3AQ06141 175 aa11.93□□□□□ -0.5
SNX4-204ENST00000473417 PRELID3AQ96N28 172 aa11.93□□□□□ -0.5
SNX4-204ENST00000473417 SRRM2Q9UQ35 2752 aaKnown RBP11.93□□□□□ -0.5
SNX4-204ENST00000473417 DNAH8Q96JB1 4490 aa11.92□□□□□ -0.5
SNX4-204ENST00000473417 PHOX2AO14813 284 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms