RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
C9orf85-204ENST00000473252 PRR34Q9NV39 138 aa8.38□□□□□ -1.07
C9orf85-204ENST00000473252 A0A1B0GUT8 65 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 HIGD1CA8MV81 97 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 NCR2O95944 276 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 RBX1P62877 108 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 COTL1Q14019 142 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 GATD1Q8NB37 220 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 ISOC2Q96AB3 205 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 TMEM243Q9BU79 118 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 NAT8Q9UHE5 227 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 HSPG2P98160 4391 aa8.37□□□□□ -1.07
C9orf85-204ENST00000473252 APOBP04114 4563 aaKnown RBP8.36□□□□□ -1.07
C9orf85-204ENST00000473252 FUSP35637 526 aaKnown RBP eCLIP8.36□□□□□ -1.07
C9orf85-204ENST00000473252 XGP55808 180 aa8.36□□□□□ -1.07
C9orf85-204ENST00000473252 GAGE6Q13070 117 aa8.36□□□□□ -1.07
C9orf85-204ENST00000473252 BAALCQ8WXS3 180 aa8.36□□□□□ -1.07
C9orf85-204ENST00000473252 TMEM191AQ9H0A3 160 aa8.36□□□□□ -1.07
C9orf85-204ENST00000473252 V9GYV3 84 aa8.36□□□□□ -1.07
C9orf85-204ENST00000473252 TRAV8-4A0A0B4J246 113 aa8.35□□□□□ -1.07
C9orf85-204ENST00000473252 H7C423 109 aa8.35□□□□□ -1.07
C9orf85-204ENST00000473252 RPL23P62829 140 aaKnown RBP8.35□□□□□ -1.07
C9orf85-204ENST00000473252 WFDC2Q14508 124 aa8.35□□□□□ -1.07
C9orf85-204ENST00000473252 TRBV6-5A0A0K0K1A5 114 aa8.34□□□□□ -1.07
C9orf85-204ENST00000473252 UBE2L6O14933 153 aa8.34□□□□□ -1.07
C9orf85-204ENST00000473252 RIGQ13278 110 aa8.34□□□□□ -1.07
C9orf85-204ENST00000473252 NAT8BQ9UHF3 227 aa8.34□□□□□ -1.07
C9orf85-204ENST00000473252 TRAV26-2A0A0B4J265 109 aa8.33□□□□□ -1.08
C9orf85-204ENST00000473252 AMTP48728 403 aa8.33□□□□□ -1.08
C9orf85-204ENST00000473252 REG3AQ06141 175 aa8.33□□□□□ -1.08
C9orf85-204ENST00000473252 LINC00269Q8N2A0 174 aa8.33□□□□□ -1.08
C9orf85-204ENST00000473252 NUP35Q8NFH5 326 aa8.33□□□□□ -1.08
C9orf85-204ENST00000473252 MRAP2Q96G30 205 aa8.33□□□□□ -1.08
C9orf85-204ENST00000473252 KRTAP17-1Q9BYP8 105 aa8.33□□□□□ -1.08
C9orf85-204ENST00000473252 SDHAF1A6NFY7 115 aa8.32□□□□□ -1.08
C9orf85-204ENST00000473252 C9JQL5 133 aa8.32□□□□□ -1.08
C9orf85-204ENST00000473252 I3L3M4 83 aa8.32□□□□□ -1.08
C9orf85-204ENST00000473252 LECT2O14960 151 aa8.32□□□□□ -1.08
C9orf85-204ENST00000473252 PPP1R17O96001 155 aa8.32□□□□□ -1.08
C9orf85-204ENST00000473252 RAB4AP20338 218 aa8.32□□□□□ -1.08
C9orf85-204ENST00000473252 ADIRFQ15847 76 aa8.32□□□□□ -1.08
C9orf85-204ENST00000473252 C20orf203Q8NBC4 194 aa8.32□□□□□ -1.08
C9orf85-204ENST00000473252 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
C9orf85-204ENST00000473252 KRTAP4-5Q9BYR2 181 aa8.32□□□□□ -1.08
C9orf85-204ENST00000473252 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.31□□□□□ -1.08
C9orf85-204ENST00000473252 A0A1B0GW15 77 aa8.31□□□□□ -1.08
C9orf85-204ENST00000473252 SMIM27A0A1W2PRY6 76 aa8.31□□□□□ -1.08
C9orf85-204ENST00000473252 EPM2AB3EWF7 344 aa8.31□□□□□ -1.08
C9orf85-204ENST00000473252 APCSP02743 223 aa8.31□□□□□ -1.08
C9orf85-204ENST00000473252 RAB14P61106 215 aa8.31□□□□□ -1.08
C9orf85-204ENST00000473252 SRSF3P84103 164 aaKnown RBP8.31□□□□□ -1.08
C9orf85-204ENST00000473252 ST20Q9HBF5 79 aa8.31□□□□□ -1.08
C9orf85-204ENST00000473252 IGLV4-60A0A075B6I1 120 aa8.3□□□□□ -1.08
C9orf85-204ENST00000473252 ZNF25P17030 456 aaPredicted RBP8.3□□□□□ -1.08
C9orf85-204ENST00000473252 PMCHP20382 165 aa8.3□□□□□ -1.08
C9orf85-204ENST00000473252 DGAT2L7PQ6IED9 249 aa8.3□□□□□ -1.08
C9orf85-204ENST00000473252 KRTAP26-1Q6PEX3 210 aa8.3□□□□□ -1.08
C9orf85-204ENST00000473252 Q6ZSA8 131 aa8.3□□□□□ -1.08
C9orf85-204ENST00000473252 CLRN3Q8NCR9 226 aa8.3□□□□□ -1.08
C9orf85-204ENST00000473252 RNF185Q96GF1 192 aa8.3□□□□□ -1.08
C9orf85-204ENST00000473252 TRBV27A0A0K0K1C4 114 aa8.29□□□□□ -1.08
C9orf85-204ENST00000473252 LINC00862A6NCI5 91 aa8.29□□□□□ -1.08
C9orf85-204ENST00000473252 HLA-DQA1P01909 254 aa8.29□□□□□ -1.08
C9orf85-204ENST00000473252 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
C9orf85-204ENST00000473252 AMN1Q8IY45 258 aa8.29□□□□□ -1.08
C9orf85-204ENST00000473252 USP17L23D6RBM5 183 aa8.28□□□□□ -1.08
C9orf85-204ENST00000473252 PPP1R2P9O14990 202 aa8.28□□□□□ -1.08
C9orf85-204ENST00000473252 S100A8P05109 93 aa8.28□□□□□ -1.08
C9orf85-204ENST00000473252 AMMECR1LQ6DCA0 310 aa8.28□□□□□ -1.08
C9orf85-204ENST00000473252 CLPSL2Q6UWE3 100 aa8.28□□□□□ -1.08
C9orf85-204ENST00000473252 PCLOQ9Y6V0 5065 aa8.27□□□□□ -1.09
C9orf85-204ENST00000473252 VCYO14598 125 aa8.27□□□□□ -1.09
C9orf85-204ENST00000473252 ESDP10768 282 aa8.27□□□□□ -1.09
C9orf85-204ENST00000473252 PNRC1Q12796 327 aaPredicted RBP8.27□□□□□ -1.09
C9orf85-204ENST00000473252 FAM104BQ5XKR9 115 aa8.27□□□□□ -1.09
C9orf85-204ENST00000473252 FAM30AQ9NZY2 134 aa8.27□□□□□ -1.09
C9orf85-204ENST00000473252 FGF6P10767 208 aa8.26□□□□□ -1.09
C9orf85-204ENST00000473252 SMAGPQ0VAQ4 97 aa8.26□□□□□ -1.09
C9orf85-204ENST00000473252 BTF3L4Q96K17 158 aa8.26□□□□□ -1.09
C9orf85-204ENST00000473252 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
C9orf85-204ENST00000473252 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
C9orf85-204ENST00000473252 F8W036 122 aa8.25□□□□□ -1.09
C9orf85-204ENST00000473252 TCAPO15273 167 aa8.25□□□□□ -1.09
C9orf85-204ENST00000473252 TSHBP01222 138 aa8.25□□□□□ -1.09
C9orf85-204ENST00000473252 RPS10P46783 165 aaKnown RBP8.25□□□□□ -1.09
C9orf85-204ENST00000473252 SUMO2P61956 95 aaKnown RBP8.25□□□□□ -1.09
C9orf85-204ENST00000473252 Q5VSD8 79 aa8.25□□□□□ -1.09
C9orf85-204ENST00000473252 RNASEKQ6P5S7 137 aaKnown RBP8.25□□□□□ -1.09
C9orf85-204ENST00000473252 DEFB104AQ8WTQ1 72 aa8.25□□□□□ -1.09
C9orf85-204ENST00000473252 TMEM101Q96IK0 257 aa8.25□□□□□ -1.09
C9orf85-204ENST00000473252 IGLV10-54A0A075B6I4 117 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.24□□□□□ -1.09
C9orf85-204ENST00000473252 IGKV2-29A2NJV5 120 aaPredicted RBP8.24□□□□□ -1.09
C9orf85-204ENST00000473252 GAS8-AS1O95177 125 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 PRSS1P07477 247 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 CAMPP49913 170 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
C9orf85-204ENST00000473252 HBBP68871 147 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 CLLU1Q5K131 121 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms