RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 REG3AQ06141 175 aa9.89□□□□□ -0.83
VTI1A-203ENST00000472892 CLPSL2Q6UWE3 100 aa9.89□□□□□ -0.83
VTI1A-203ENST00000472892 C20orf203Q8NBC4 194 aa9.89□□□□□ -0.83
VTI1A-203ENST00000472892 DPH3P1Q9H4G8 78 aa9.89□□□□□ -0.83
VTI1A-203ENST00000472892 C9orf163Q8N9P6 203 aa9.88□□□□□ -0.83
VTI1A-203ENST00000472892 PGLYRP4Q96LB8 373 aa9.88□□□□□ -0.83
VTI1A-203ENST00000472892 TMEM243Q9BU79 118 aa9.88□□□□□ -0.83
VTI1A-203ENST00000472892 CNFNQ9BYD5 112 aa9.88□□□□□ -0.83
VTI1A-203ENST00000472892 TRAV8-4A0A0B4J246 113 aa9.87□□□□□ -0.83
VTI1A-203ENST00000472892 CLRN3Q8NCR9 226 aa9.87□□□□□ -0.83
VTI1A-203ENST00000472892 OCC1Q8TAD7 63 aa9.87□□□□□ -0.83
VTI1A-203ENST00000472892 IGLV4-60A0A075B6I1 120 aa9.86□□□□□ -0.83
VTI1A-203ENST00000472892 TWIST1Q15672 202 aa9.86□□□□□ -0.83
VTI1A-203ENST00000472892 RPP21Q9H633 154 aaKnown RBP9.86□□□□□ -0.83
VTI1A-203ENST00000472892 IGLV10-54A0A075B6I4 117 aa9.85□□□□□ -0.83
VTI1A-203ENST00000472892 K7EN84 100 aa9.85□□□□□ -0.83
VTI1A-203ENST00000472892 GFRA4Q9GZZ7 299 aa9.85□□□□□ -0.83
VTI1A-203ENST00000472892 RNASE7Q9H1E1 156 aaKnown RBP9.85□□□□□ -0.83
VTI1A-203ENST00000472892 Q6ZNX1 250 aa9.84□□□□□ -0.83
VTI1A-203ENST00000472892 SDIM1Q6ZPB5 146 aa9.84□□□□□ -0.83
VTI1A-203ENST00000472892 LRP1Q07954 4544 aaKnown RBP9.83□□□□□ -0.84
VTI1A-203ENST00000472892 CNBPP62633 177 aaKnown RBP9.83□□□□□ -0.84
VTI1A-203ENST00000472892 COTL1Q14019 142 aa9.83□□□□□ -0.84
VTI1A-203ENST00000472892 GATD1Q8NB37 220 aa9.83□□□□□ -0.84
VTI1A-203ENST00000472892 GTSF1Q8WW33 167 aa9.83□□□□□ -0.84
VTI1A-203ENST00000472892 UBE2L6O14933 153 aa9.82□□□□□ -0.84
VTI1A-203ENST00000472892 AMTP48728 403 aa9.82□□□□□ -0.84
VTI1A-203ENST00000472892 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-203ENST00000472892 TRAV26-2A0A0B4J265 109 aa9.81□□□□□ -0.84
VTI1A-203ENST00000472892 TMEM250H0YL14 139 aa9.81□□□□□ -0.84
VTI1A-203ENST00000472892 BLOC1S1P78537 153 aa9.81□□□□□ -0.84
VTI1A-203ENST00000472892 LYPD6BQ8NI32 183 aa9.81□□□□□ -0.84
VTI1A-203ENST00000472892 hDV102S1A0JD36 115 aa9.8□□□□□ -0.84
VTI1A-203ENST00000472892 PANO1I0J062 215 aa9.8□□□□□ -0.84
VTI1A-203ENST00000472892 OXTP01178 125 aa9.8□□□□□ -0.84
VTI1A-203ENST00000472892 SLPIP03973 132 aa9.8□□□□□ -0.84
VTI1A-203ENST00000472892 FOXA3P55318 350 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-203ENST00000472892 FAM231DQ6ZW35 169 aa9.8□□□□□ -0.84
VTI1A-203ENST00000472892 GATCO43716 136 aaKnown RBP9.79□□□□□ -0.84
VTI1A-203ENST00000472892 NCR2O95944 276 aa9.79□□□□□ -0.84
VTI1A-203ENST00000472892 RPL37AP61513 92 aaKnown RBP9.79□□□□□ -0.84
VTI1A-203ENST00000472892 CIRBPQ14011 172 aaKnown RBP9.79□□□□□ -0.84
VTI1A-203ENST00000472892 TEX261Q6UWH6 196 aa9.79□□□□□ -0.84
VTI1A-203ENST00000472892 ALKAL2Q6UX46 152 aa9.79□□□□□ -0.84
VTI1A-203ENST00000472892 SMIM15Q7Z3B0 74 aa9.79□□□□□ -0.84
VTI1A-203ENST00000472892 AKAP14Q86UN6 197 aa9.79□□□□□ -0.84
VTI1A-203ENST00000472892 RPL39LQ96EH5 51 aaKnown RBP9.79□□□□□ -0.84
VTI1A-203ENST00000472892 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
VTI1A-203ENST00000472892 FAT3Q8TDW7 4589 aa9.78□□□□□ -0.84
VTI1A-203ENST00000472892 A8MWL6 223 aa9.78□□□□□ -0.84
VTI1A-203ENST00000472892 XP32Q5T750 250 aa9.78□□□□□ -0.84
VTI1A-203ENST00000472892 AP5S1Q9NUS5 200 aa9.78□□□□□ -0.84
VTI1A-203ENST00000472892 H7C423 109 aa9.77□□□□□ -0.85
VTI1A-203ENST00000472892 IGHV3-64A0A075B6Q5 118 aa9.76□□□□□ -0.85
VTI1A-203ENST00000472892 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-203ENST00000472892 GAGE12HA6NDE8 117 aa9.76□□□□□ -0.85
VTI1A-203ENST00000472892 SDHAF1A6NFY7 115 aa9.76□□□□□ -0.85
VTI1A-203ENST00000472892 CT83Q5H943 113 aa9.76□□□□□ -0.85
VTI1A-203ENST00000472892 TRBV6-5A0A0K0K1A5 114 aa9.75□□□□□ -0.85
VTI1A-203ENST00000472892 NDUFS6O75380 124 aaKnown RBP9.75□□□□□ -0.85
VTI1A-203ENST00000472892 AMMECR1LQ6DCA0 310 aa9.75□□□□□ -0.85
VTI1A-203ENST00000472892 CFAP161Q6P656 301 aa9.75□□□□□ -0.85
VTI1A-203ENST00000472892 C15orf56Q8N910 161 aa9.75□□□□□ -0.85
VTI1A-203ENST00000472892 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-203ENST00000472892 IGKV3OR2-268A0A0C4DH90 116 aa9.74□□□□□ -0.85
VTI1A-203ENST00000472892 IGKV2-29A2NJV5 120 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-203ENST00000472892 FAM231BA6NCW3 169 aa9.74□□□□□ -0.85
VTI1A-203ENST00000472892 I3L3M4 83 aa9.74□□□□□ -0.85
VTI1A-203ENST00000472892 EIF4EBP3O60516 100 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-203ENST00000472892 APCSP02743 223 aa9.74□□□□□ -0.85
VTI1A-203ENST00000472892 FGF6P10767 208 aa9.74□□□□□ -0.85
VTI1A-203ENST00000472892 HNRNPA3P51991 378 aaKnown RBP9.74□□□□□ -0.85
VTI1A-203ENST00000472892 CHCHD10Q8WYQ3 142 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-203ENST00000472892 PKHD1L1Q86WI1 4243 aa9.73□□□□□ -0.85
VTI1A-203ENST00000472892 CEBPGP53567 150 aa9.73□□□□□ -0.85
VTI1A-203ENST00000472892 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
VTI1A-203ENST00000472892 RNASEKQ6P5S7 137 aaKnown RBP9.73□□□□□ -0.85
VTI1A-203ENST00000472892 LINC01551Q86U37 167 aa9.73□□□□□ -0.85
VTI1A-203ENST00000472892 DPH3Q96FX2 82 aa9.73□□□□□ -0.85
VTI1A-203ENST00000472892 RNF185Q96GF1 192 aa9.73□□□□□ -0.85
VTI1A-203ENST00000472892 hCG_2014768A0A024R1R8 64 aa9.72□□□□□ -0.85
VTI1A-203ENST00000472892 GAS8-AS1O95177 125 aa9.72□□□□□ -0.85
VTI1A-203ENST00000472892 ESDP10768 282 aa9.72□□□□□ -0.85
VTI1A-203ENST00000472892 ZNF25P17030 456 aaPredicted RBP9.72□□□□□ -0.85
VTI1A-203ENST00000472892 PMCHP20382 165 aa9.72□□□□□ -0.85
VTI1A-203ENST00000472892 TSKUQ8WUA8 353 aa9.72□□□□□ -0.85
VTI1A-203ENST00000472892 BORCS7Q96B45 105 aa9.72□□□□□ -0.85
VTI1A-203ENST00000472892 FAM210AQ96ND0 272 aa9.72□□□□□ -0.85
VTI1A-203ENST00000472892 SMIM7Q9BQ49 75 aa9.72□□□□□ -0.85
VTI1A-203ENST00000472892 EIF5A2Q9GZV4 153 aaKnown RBP9.72□□□□□ -0.85
VTI1A-203ENST00000472892 TMEM191AQ9H0A3 160 aa9.72□□□□□ -0.85
VTI1A-203ENST00000472892 HMCN2Q8NDA2 5059 aa9.72□□□□□ -0.85
VTI1A-203ENST00000472892 A0A087WYN8 130 aa9.71□□□□□ -0.86
VTI1A-203ENST00000472892 A0A1B0GUT8 65 aa9.71□□□□□ -0.86
VTI1A-203ENST00000472892 HIGD1CA8MV81 97 aa9.71□□□□□ -0.86
VTI1A-203ENST00000472892 CHTF8P0CG12 524 aa9.71□□□□□ -0.86
VTI1A-203ENST00000472892 RPS10P46783 165 aaKnown RBP9.71□□□□□ -0.86
VTI1A-203ENST00000472892 SPACA4Q8TDM5 124 aa9.71□□□□□ -0.86
VTI1A-203ENST00000472892 ST20Q9HBF5 79 aa9.71□□□□□ -0.86
VTI1A-203ENST00000472892 OSTCQ9NRP0 149 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms