RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 IGLV4-3A0A075B6K6 122 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 TRBV7-3A0A075B6L6 115 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 IGHV3-73A0A0B4J1V6 119 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 TRAV4A0A0B4J268 109 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 P0DMU3 169 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 FAM231AP0DMU4 169 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 FAM231CP0DMU5 169 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 FXYD2P54710 66 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 PROK1P58294 105 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 RPL36AP83881 106 aaKnown RBP5.53□□□□□ -1.52
CCDC171-205ENST00000472806 SRSF9Q13242 221 aaKnown RBP eCLIP5.53□□□□□ -1.52
CCDC171-205ENST00000472806 LYRM7Q5U5X0 104 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 HIST2H2BCQ6DN03 193 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 IL17DQ8TAD2 202 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 RPL36ALQ969Q0 106 aaKnown RBP5.53□□□□□ -1.52
CCDC171-205ENST00000472806 RAB37Q96AX2 223 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 TIMM21Q9BVV7 248 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 TTTY13Q9BZ97 58 aa5.53□□□□□ -1.52
CCDC171-205ENST00000472806 SPANXB1Q9NS25 103 aaPredicted RBP5.53□□□□□ -1.52
CCDC171-205ENST00000472806 MRPL16Q9NX20 251 aaKnown RBP5.53□□□□□ -1.52
CCDC171-205ENST00000472806 NHP2Q9NX24 153 aaKnown RBP5.53□□□□□ -1.52
CCDC171-205ENST00000472806 MYO18BQ8IUG5 2567 aa5.52□□□□□ -1.53
CCDC171-205ENST00000472806 TRGV1A0A0A0MS02 117 aa5.52□□□□□ -1.53
CCDC171-205ENST00000472806 A0A1B0GWB2 263 aa5.52□□□□□ -1.53
CCDC171-205ENST00000472806 TMEM223A0PJW6 202 aa5.52□□□□□ -1.53
CCDC171-205ENST00000472806 J3QQQ9 107 aa5.52□□□□□ -1.53
CCDC171-205ENST00000472806 DAZ2Q13117 558 aaKnown RBP5.52□□□□□ -1.53
CCDC171-205ENST00000472806 C12orf74Q32Q52 190 aa5.52□□□□□ -1.53
CCDC171-205ENST00000472806 DAZ4Q86SG3 579 aaKnown RBP5.52□□□□□ -1.53
CCDC171-205ENST00000472806 C1orf158Q8N1D5 194 aa5.52□□□□□ -1.53
CCDC171-205ENST00000472806 RNASE8Q8TDE3 154 aaKnown RBP5.52□□□□□ -1.53
CCDC171-205ENST00000472806 AMELXQ99217 191 aa5.52□□□□□ -1.53
CCDC171-205ENST00000472806 DAZ3Q9NR90 486 aaKnown RBP5.52□□□□□ -1.53
CCDC171-205ENST00000472806 SPCS1Q9Y6A9 102 aa5.52□□□□□ -1.53
CCDC171-205ENST00000472806 NAV2Q8IVL1 2488 aa5.52□□□□□ -1.53
CCDC171-205ENST00000472806 IGHV3OR16-12A0A075B7B8 117 aa5.51□□□□□ -1.53
CCDC171-205ENST00000472806 TINCRA0A1B0GVN0 87 aa5.51□□□□□ -1.53
CCDC171-205ENST00000472806 K7EQD1 137 aa5.51□□□□□ -1.53
CCDC171-205ENST00000472806 INSL3P51460 131 aa5.51□□□□□ -1.53
CCDC171-205ENST00000472806 MRPS36P82909 103 aaKnown RBP5.51□□□□□ -1.53
CCDC171-205ENST00000472806 DGAT2L7PQ6IED9 249 aa5.51□□□□□ -1.53
CCDC171-205ENST00000472806 ZNRF2Q8NHG8 242 aa5.51□□□□□ -1.53
CCDC171-205ENST00000472806 CBY1Q9Y3M2 126 aa5.51□□□□□ -1.53
CCDC171-205ENST00000472806 CREBBPQ92793 2442 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 GAGE12BA1L429 117 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 IGLL5B9A064 214 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 TMEM238C9JI98 176 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 K7ERU9 68 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
CCDC171-205ENST00000472806 EMP1P54849 157 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 RRN3P1Q2M238 152 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 ZNF479Q96JC4 524 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 CHCHD7Q9BUK0 85 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 UBE2D4Q9Y2X8 147 aa5.5□□□□□ -1.53
CCDC171-205ENST00000472806 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
CCDC171-205ENST00000472806 A0A0J9YY99 117 aa5.49□□□□□ -1.53
CCDC171-205ENST00000472806 H7C423 109 aa5.49□□□□□ -1.53
CCDC171-205ENST00000472806 TIRAPP58753 221 aa5.49□□□□□ -1.53
CCDC171-205ENST00000472806 SLC25A29Q8N8R3 303 aa5.49□□□□□ -1.53
CCDC171-205ENST00000472806 PHLDA1Q8WV24 401 aaPredicted RBP5.49□□□□□ -1.53
CCDC171-205ENST00000472806 OVOL2Q9BRP0 275 aa5.49□□□□□ -1.53
CCDC171-205ENST00000472806 GEMIN7Q9H840 131 aaKnown RBP5.49□□□□□ -1.53
CCDC171-205ENST00000472806 PTPN13Q12923 2485 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 AGRNO00468 2067 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 TRGV2A0A075B6R0 118 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.48□□□□□ -1.53
CCDC171-205ENST00000472806 IGHV1-58A0A0C4DH39 117 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 TRBV6-4A0A1B0GX49 114 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 K7ERJ3 54 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 LY6G6DO95868 133 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 RPL24P83731 157 aaKnown RBP5.48□□□□□ -1.53
CCDC171-205ENST00000472806 C9orf66Q5T8R8 295 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 Q6ZSN1 163 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 DEFB104AQ8WTQ1 72 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 TMEM101Q96IK0 257 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 OPRPNQ99935 248 aaPredicted RBP5.48□□□□□ -1.53
CCDC171-205ENST00000472806 GTSF1LQ9H1H1 148 aa5.48□□□□□ -1.53
CCDC171-205ENST00000472806 CSDC2Q9Y534 153 aaKnown RBP5.48□□□□□ -1.53
CCDC171-205ENST00000472806 FLNCQ14315 2725 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 LRRK2Q5S007 2527 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 USP9YO00507 2555 aaPredicted RBP5.47□□□□□ -1.53
CCDC171-205ENST00000472806 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.47□□□□□ -1.53
CCDC171-205ENST00000472806 IGKV2-29A2NJV5 120 aaPredicted RBP5.47□□□□□ -1.53
CCDC171-205ENST00000472806 SMIM9A6NGZ8 99 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 F8W1H4 67 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 UBE2L6O14933 153 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 PRM2P04554 102 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 RPL35AP18077 110 aaKnown RBP5.47□□□□□ -1.53
CCDC171-205ENST00000472806 UBE2D1P51668 147 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 UBE2D3P61077 147 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 UBE2D2P62837 147 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 HERVK_113P63121 156 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 LINC00482Q8N8I6 264 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 COPS9Q8WXC6 57 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 NOP10Q9NPE3 64 aaKnown RBP5.47□□□□□ -1.53
CCDC171-205ENST00000472806 DOPEY2Q9Y3R5 2298 aa5.47□□□□□ -1.53
CCDC171-205ENST00000472806 COL12A1Q99715 3063 aa5.46□□□□□ -1.53
CCDC171-205ENST00000472806 TRGV4A0A0C4DH28 118 aa5.46□□□□□ -1.54
CCDC171-205ENST00000472806 IGHV3-38A0A0C4DH36 116 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms