RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 P01737 135 aa11.93□□□□□ -0.5
RHBDF1-207ENST00000472390 SULT1A2P50226 295 aa11.93□□□□□ -0.5
RHBDF1-207ENST00000472390 COX6A2Q02221 97 aa11.93□□□□□ -0.5
RHBDF1-207ENST00000472390 PRSS3P2Q8NHM4 247 aa11.93□□□□□ -0.5
RHBDF1-207ENST00000472390 IGKV2-24A0A0C4DH68 120 aa11.92□□□□□ -0.5
RHBDF1-207ENST00000472390 A0A1B0GUV1 79 aa11.92□□□□□ -0.5
RHBDF1-207ENST00000472390 NTF3P20783 257 aa11.92□□□□□ -0.5
RHBDF1-207ENST00000472390 CACNG7P62955 275 aa11.92□□□□□ -0.5
RHBDF1-207ENST00000472390 MANBALQ9NQG1 85 aa11.92□□□□□ -0.5
RHBDF1-207ENST00000472390 NIT2Q9NQR4 276 aa11.92□□□□□ -0.5
RHBDF1-207ENST00000472390 UBE2L6O14933 153 aa11.91□□□□□ -0.5
RHBDF1-207ENST00000472390 Q6ZNX1 250 aa11.91□□□□□ -0.5
RHBDF1-207ENST00000472390 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
RHBDF1-207ENST00000472390 DPH3P1Q9H4G8 78 aa11.91□□□□□ -0.5
RHBDF1-207ENST00000472390 PLAC8Q9NZF1 115 aa11.91□□□□□ -0.5
RHBDF1-207ENST00000472390 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.9□□□□□ -0.5
RHBDF1-207ENST00000472390 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.9□□□□□ -0.5
RHBDF1-207ENST00000472390 IGKV2-29A2NJV5 120 aaPredicted RBP11.9□□□□□ -0.5
RHBDF1-207ENST00000472390 GNG4P50150 75 aa11.9□□□□□ -0.5
RHBDF1-207ENST00000472390 FOXA3P55318 350 aaPredicted RBP11.9□□□□□ -0.5
RHBDF1-207ENST00000472390 RPS20P60866 119 aaKnown RBP11.9□□□□□ -0.5
RHBDF1-207ENST00000472390 COTL1Q14019 142 aa11.9□□□□□ -0.5
RHBDF1-207ENST00000472390 GATD1Q8NB37 220 aa11.9□□□□□ -0.5
RHBDF1-207ENST00000472390 PGLYRP4Q96LB8 373 aa11.9□□□□□ -0.5
RHBDF1-207ENST00000472390 HMSDA8MTL9 139 aa11.89□□□□□ -0.51
RHBDF1-207ENST00000472390 IFNA1P01562 189 aa11.89□□□□□ -0.51
RHBDF1-207ENST00000472390 TRGC1P0CF51 173 aa11.89□□□□□ -0.51
RHBDF1-207ENST00000472390 MAJINQ3KP22 176 aa11.89□□□□□ -0.51
RHBDF1-207ENST00000472390 WDR73Q6P4I2 378 aa11.89□□□□□ -0.51
RHBDF1-207ENST00000472390 LYPD6BQ8NI32 183 aa11.89□□□□□ -0.51
RHBDF1-207ENST00000472390 LINC00526Q96FQ7 95 aa11.89□□□□□ -0.51
RHBDF1-207ENST00000472390 RNF213Q63HN8 5207 aa11.89□□□□□ -0.51
RHBDF1-207ENST00000472390 CTRLP40313 264 aa11.88□□□□□ -0.51
RHBDF1-207ENST00000472390 RNF185Q96GF1 192 aa11.88□□□□□ -0.51
RHBDF1-207ENST00000472390 A0A096LNI7 61 aa11.87□□□□□ -0.51
RHBDF1-207ENST00000472390 NUDT10Q8NFP7 164 aa11.87□□□□□ -0.51
RHBDF1-207ENST00000472390 GTSF1Q8WW33 167 aa11.87□□□□□ -0.51
RHBDF1-207ENST00000472390 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
RHBDF1-207ENST00000472390 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
RHBDF1-207ENST00000472390 MED9Q9NWA0 146 aa11.87□□□□□ -0.51
RHBDF1-207ENST00000472390 PRR3P79522 188 aaKnown RBP11.86□□□□□ -0.51
RHBDF1-207ENST00000472390 RNASE7Q9H1E1 156 aaKnown RBP11.86□□□□□ -0.51
RHBDF1-207ENST00000472390 TRAV1-1A0A0B4J248 108 aa11.85□□□□□ -0.51
RHBDF1-207ENST00000472390 F2Z2F3 143 aa11.85□□□□□ -0.51
RHBDF1-207ENST00000472390 K7EN84 100 aa11.85□□□□□ -0.51
RHBDF1-207ENST00000472390 RPS10P46783 165 aaKnown RBP11.85□□□□□ -0.51
RHBDF1-207ENST00000472390 MEF2BQ02080 365 aaPredicted RBP11.85□□□□□ -0.51
RHBDF1-207ENST00000472390 TWIST1Q15672 202 aa11.85□□□□□ -0.51
RHBDF1-207ENST00000472390 RNASEKQ6P5S7 137 aaKnown RBP11.85□□□□□ -0.51
RHBDF1-207ENST00000472390 GAS8-AS1O95177 125 aa11.84□□□□□ -0.51
RHBDF1-207ENST00000472390 STPG4Q8N801 248 aa11.84□□□□□ -0.51
RHBDF1-207ENST00000472390 C7orf33Q8WU49 177 aa11.84□□□□□ -0.51
RHBDF1-207ENST00000472390 NDUFS6O75380 124 aaKnown RBP11.83□□□□□ -0.52
RHBDF1-207ENST00000472390 FOXI1Q12951 378 aa11.83□□□□□ -0.52
RHBDF1-207ENST00000472390 AMMECR1LQ6DCA0 310 aa11.83□□□□□ -0.52
RHBDF1-207ENST00000472390 C9orf62Q8N4C0 152 aa11.83□□□□□ -0.52
RHBDF1-207ENST00000472390 GVQW2A0A096LPI5 108 aaPredicted RBP11.82□□□□□ -0.52
RHBDF1-207ENST00000472390 XKRY2A2RUG3 117 aa11.82□□□□□ -0.52
RHBDF1-207ENST00000472390 BCL2P10415 239 aa11.82□□□□□ -0.52
RHBDF1-207ENST00000472390 FGF6P10767 208 aa11.82□□□□□ -0.52
RHBDF1-207ENST00000472390 RPP21Q9H633 154 aaKnown RBP11.82□□□□□ -0.52
RHBDF1-207ENST00000472390 XCL1P47992 114 aa11.81□□□□□ -0.52
RHBDF1-207ENST00000472390 EIF5AP63241 154 aaKnown RBP11.81□□□□□ -0.52
RHBDF1-207ENST00000472390 CNFNQ9BYD5 112 aa11.81□□□□□ -0.52
RHBDF1-207ENST00000472390 PDE6DO43924 150 aa11.8□□□□□ -0.52
RHBDF1-207ENST00000472390 APCSP02743 223 aa11.8□□□□□ -0.52
RHBDF1-207ENST00000472390 SMIM12Q96EX1 92 aa11.8□□□□□ -0.52
RHBDF1-207ENST00000472390 FAM231BA6NCW3 169 aa11.79□□□□□ -0.52
RHBDF1-207ENST00000472390 SDHAF1A6NFY7 115 aa11.79□□□□□ -0.52
RHBDF1-207ENST00000472390 CFAP161Q6P656 301 aa11.79□□□□□ -0.52
RHBDF1-207ENST00000472390 OCC1Q8TAD7 63 aa11.79□□□□□ -0.52
RHBDF1-207ENST00000472390 LINC01600Q96MT4 127 aa11.79□□□□□ -0.52
RHBDF1-207ENST00000472390 CCL25O15444 150 aa11.78□□□□□ -0.52
RHBDF1-207ENST00000472390 TMEM242Q9NWH2 141 aa11.77□□□□□ -0.53
RHBDF1-207ENST00000472390 TSHBP01222 138 aa11.75□□□□□ -0.53
RHBDF1-207ENST00000472390 LINC00959A0A1B0GUT2 108 aa11.74□□□□□ -0.53
RHBDF1-207ENST00000472390 TEX46H3BTG2 121 aa11.74□□□□□ -0.53
RHBDF1-207ENST00000472390 NCR2O95944 276 aa11.74□□□□□ -0.53
RHBDF1-207ENST00000472390 OR5A1Q8NGJ0 315 aa11.74□□□□□ -0.53
RHBDF1-207ENST00000472390 CARD19Q96LW7 228 aa11.74□□□□□ -0.53
RHBDF1-207ENST00000472390 BIN3Q9NQY0 253 aa11.74□□□□□ -0.53
RHBDF1-207ENST00000472390 A0A0J9YXV3 536 aa11.73□□□□□ -0.53
RHBDF1-207ENST00000472390 PMCHP20382 165 aa11.72□□□□□ -0.53
RHBDF1-207ENST00000472390 KRTAP10-8P60410 259 aa11.72□□□□□ -0.53
RHBDF1-207ENST00000472390 GATCO43716 136 aaKnown RBP11.71□□□□□ -0.53
RHBDF1-207ENST00000472390 ESDP10768 282 aa11.71□□□□□ -0.53
RHBDF1-207ENST00000472390 RNASE13Q5GAN3 156 aaKnown RBP11.71□□□□□ -0.53
RHBDF1-207ENST00000472390 IGHV1-58A0A0C4DH39 117 aa11.7□□□□□ -0.54
RHBDF1-207ENST00000472390 SMKR1H3BMG3 65 aa11.7□□□□□ -0.54
RHBDF1-207ENST00000472390 H7C423 109 aa11.7□□□□□ -0.54
RHBDF1-207ENST00000472390 I3L3M4 83 aa11.7□□□□□ -0.54
RHBDF1-207ENST00000472390 EIF5AL1Q6IS14 154 aaKnown RBP11.7□□□□□ -0.54
RHBDF1-207ENST00000472390 ZNF25P17030 456 aaPredicted RBP11.69□□□□□ -0.54
RHBDF1-207ENST00000472390 CEBPGP53567 150 aa11.69□□□□□ -0.54
RHBDF1-207ENST00000472390 SMIM15Q7Z3B0 74 aa11.69□□□□□ -0.54
RHBDF1-207ENST00000472390 BTF3L4Q96K17 158 aa11.69□□□□□ -0.54
RHBDF1-207ENST00000472390 TRBV6-5A0A0K0K1A5 114 aa11.68□□□□□ -0.54
RHBDF1-207ENST00000472390 SYCNQ0VAF6 134 aa11.68□□□□□ -0.54
RHBDF1-207ENST00000472390 GAGE2BQ13066 116 aa11.68□□□□□ -0.54
RHBDF1-207ENST00000472390 SRSF9Q13242 221 aaKnown RBP eCLIP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms