RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 TLX1NBP0CAT3 122 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 SPART-AS1P0CW21 52 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 AKR1D1P51857 326 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 AKR1C2P52895 323 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 LINC00315P59091 139 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 DEFB131AP59861 70 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 CCL20P78556 96 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 C10orf55Q5SWW7 151 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 C10orf126Q8N4M7 172 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 C21orf62Q9NYP8 219 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 CRCT1Q9UGL9 99 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 NAT8Q9UHE5 227 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 FUT9Q9Y231 359 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 IGHV3OR16-8A0A075B7F1 116 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 MEIS3P1A6NDR6 274 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 ZNF324O75467 553 aaPredicted RBP4.38□□□□□ -1.71
SCAF4-205ENST00000472318 PTHLHP12272 177 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 S100A4P26447 101 aaKnown RBP4.38□□□□□ -1.71
SCAF4-205ENST00000472318 CSN1S1P47710 185 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 NDUFA6P56556 154 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 RBM11P57052 281 aaKnown RBP4.38□□□□□ -1.71
SCAF4-205ENST00000472318 AADACL3Q5VUY0 350 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 AMN1Q8IY45 258 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 DAND5Q8N907 189 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 OR5C1Q8NGR4 320 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 OTORQ9NRC9 128 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 ZNF586Q9NXT0 402 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 IL36BQ9NZH7 164 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 PHLDA3Q9Y5J5 127 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 A0A087WTM6 91 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 IGHV3-21A0A0B4J1V1 117 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 C1orf196B1AJZ1 125 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 RBFOX2O43251 390 aaKnown RBP eCLIP4.37□□□□□ -1.715e-7■■□□□ 14.3
SCAF4-205ENST00000472318 PRM2P04554 102 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
SCAF4-205ENST00000472318 AZU1P20160 251 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 SDC2P34741 201 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 CCL18P55774 89 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 RPL30P62888 115 aaKnown RBP4.37□□□□□ -1.71
SCAF4-205ENST00000472318 MSMO1Q15800 293 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 HIGD2BQ4VC39 106 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 Q5XG85 94 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 AMTNQ6UX39 209 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 NTM-AS1Q6ZSK4 140 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 NIT2Q9NQR4 276 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 TNFSF18Q9UNG2 199 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 LOC107984640A0A0U1RRK4 108 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 BBIP1A8MTZ0 92 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 ZNF670-ZNF695F2Z2N8 137 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 CORTO00230 105 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 CST7O76096 145 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 GPX1P07203 203 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 OR5AC1P0C628 307 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 ZNF80P51504 273 aaPredicted RBP4.36□□□□□ -1.71
SCAF4-205ENST00000472318 TAS2R20P59543 309 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 DERL1Q9BUN8 251 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 TRBV7-6A0A0J9YX20 115 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 MCRIP1C9JLW8 97 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 E7EUB6 86 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 MT-ND4LP03901 98 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 RPL35P42766 123 aaKnown RBP4.35□□□□□ -1.71
SCAF4-205ENST00000472318 YPEL3P61236 119 aaPredicted RBP4.35□□□□□ -1.71
SCAF4-205ENST00000472318 PPP3R1P63098 170 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 MPV17LQ2QL34 196 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 KLK9Q2XQG4 91 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 SP6Q3SY56 376 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 TMEM244Q5VVB8 128 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 FAM104BQ5XKR9 115 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 AMMECR1LQ6DCA0 310 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 PACRGLQ8N7B6 248 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 PSMG3Q9BT73 122 aaPredicted RBP4.35□□□□□ -1.71
SCAF4-205ENST00000472318 RHPN1-AS1Q9BWJ2 59 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 SLC39A9Q9NUM3 307 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 KLK9Q9UKQ9 250 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 TRBV7-1A0A0A6YYK4 115 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 TMEM223A0PJW6 202 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 PGLYRP1O75594 196 aaPredicted RBP4.34□□□□□ -1.71
SCAF4-205ENST00000472318 NCR2O95944 276 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 NPPCP23582 126 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 RPL27AP46776 148 aaKnown RBP4.34□□□□□ -1.71
SCAF4-205ENST00000472318 TMBIM6P55061 237 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 UBE2BP63146 152 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 HMGN3Q15651 99 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 ARPINQ7Z6K5 226 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 DCANP1Q8TF63 244 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 GABARAPL1Q9H0R8 117 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 M0R378 163 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 HRASP01112 189 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 KRASP01116 189 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 FABP2P12104 132 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 CRYBB3P26998 211 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 RAB5CP51148 216 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 SYCNQ0VAF6 134 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 MRPL51Q4U2R6 128 aaKnown RBP4.33□□□□□ -1.72
SCAF4-205ENST00000472318 C9orf129Q5T035 196 aaKnown RBP4.33□□□□□ -1.72
SCAF4-205ENST00000472318 TMEM14EPQ6UXP3 125 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 ZNF705AQ6ZN79 300 aaPredicted RBP4.33□□□□□ -1.72
SCAF4-205ENST00000472318 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 HIST1H2BAQ96A08 127 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms