RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 FCER1GP30273 86 aa13.16□□□□□ -0.3
SNX4-203ENST00000471751 LAGE3Q14657 143 aa13.16□□□□□ -0.3
SNX4-203ENST00000471751 TRBV6-8A0A0A6YYG3 113 aa13.15□□□□□ -0.3
SNX4-203ENST00000471751 ESDP10768 282 aa13.15□□□□□ -0.3
SNX4-203ENST00000471751 IQCJQ1A5X6 159 aa13.15□□□□□ -0.3
SNX4-203ENST00000471751 TMEM18Q96B42 140 aa13.15□□□□□ -0.3
SNX4-203ENST00000471751 KMT2CQ8NEZ4 4911 aaKnown RBP13.15□□□□□ -0.3
SNX4-203ENST00000471751 C3orf84H3BNL1 204 aa13.14□□□□□ -0.31
SNX4-203ENST00000471751 NUDT3O95989 172 aa13.14□□□□□ -0.31
SNX4-203ENST00000471751 TSHBP01222 138 aa13.14□□□□□ -0.31
SNX4-203ENST00000471751 PKIAP61925 76 aa13.14□□□□□ -0.31
SNX4-203ENST00000471751 SMAGPQ0VAQ4 97 aa13.14□□□□□ -0.31
SNX4-203ENST00000471751 LELP1Q5T871 98 aa13.14□□□□□ -0.31
SNX4-203ENST00000471751 TRBV25-1A0A075B6N4 114 aa13.13□□□□□ -0.31
SNX4-203ENST00000471751 IGHV1-24A0A0C4DH33 117 aa13.13□□□□□ -0.31
SNX4-203ENST00000471751 LYPD5Q6UWN5 251 aa13.13□□□□□ -0.31
SNX4-203ENST00000471751 APLNQ9ULZ1 77 aa13.13□□□□□ -0.31
SNX4-203ENST00000471751 S100A6P06703 90 aa13.13□□□□□ -0.31
SNX4-203ENST00000471751 NPSP0C0P6 89 aa13.12□□□□□ -0.31
SNX4-203ENST00000471751 CCL18P55774 89 aa13.12□□□□□ -0.31
SNX4-203ENST00000471751 URB1-AS1Q96HZ7 61 aa13.12□□□□□ -0.31
SNX4-203ENST00000471751 IGHV3-38A0A0C4DH36 116 aa13.11□□□□□ -0.31
SNX4-203ENST00000471751 HSBP1O75506 76 aa13.11□□□□□ -0.31
SNX4-203ENST00000471751 AMTP48728 403 aa13.11□□□□□ -0.31
SNX4-203ENST00000471751 NTM-AS1Q6ZSK4 140 aa13.11□□□□□ -0.31
SNX4-203ENST00000471751 PACRGQ96M98 296 aaPredicted RBP13.11□□□□□ -0.31
SNX4-203ENST00000471751 SERF1AO75920 110 aa13.1□□□□□ -0.31
SNX4-203ENST00000471751 NDUFA6P56556 154 aa13.1□□□□□ -0.31
SNX4-203ENST00000471751 RNASEKQ6P5S7 137 aaKnown RBP13.1□□□□□ -0.31
SNX4-203ENST00000471751 C20orf203Q8NBC4 194 aa13.1□□□□□ -0.31
SNX4-203ENST00000471751 TMEM243Q9BU79 118 aa13.1□□□□□ -0.31
SNX4-203ENST00000471751 TRAV8-6A0A0B4J262 113 aa13.09□□□□□ -0.31
SNX4-203ENST00000471751 ZFAND6Q6FIF0 208 aa13.09□□□□□ -0.31
SNX4-203ENST00000471751 CHCHD7Q9BUK0 85 aa13.09□□□□□ -0.31
SNX4-203ENST00000471751 TIMM21Q9BVV7 248 aa13.09□□□□□ -0.31
SNX4-203ENST00000471751 CSDC2Q9Y534 153 aaKnown RBP13.09□□□□□ -0.31
SNX4-203ENST00000471751 DNAH7Q8WXX0 4024 aa13.08□□□□□ -0.32
SNX4-203ENST00000471751 ESRGQ1W209 222 aa13.08□□□□□ -0.32
SNX4-203ENST00000471751 UPK3BQ9BT76 320 aa13.08□□□□□ -0.32
SNX4-203ENST00000471751 CYSLTR1Q9Y271 337 aa13.08□□□□□ -0.32
SNX4-203ENST00000471751 RYR3Q15413 4870 aa13.07□□□□□ -0.32
SNX4-203ENST00000471751 A0A1B0GUV1 79 aa13.07□□□□□ -0.32
SNX4-203ENST00000471751 HBDP02042 147 aa13.07□□□□□ -0.32
SNX4-203ENST00000471751 ZNF25P17030 456 aaPredicted RBP13.07□□□□□ -0.32
SNX4-203ENST00000471751 LINC00310P59036 64 aa13.07□□□□□ -0.32
SNX4-203ENST00000471751 TOMM6Q96B49 74 aa13.07□□□□□ -0.32
SNX4-203ENST00000471751 MRPS16Q9Y3D3 137 aaKnown RBP13.07□□□□□ -0.32
SNX4-203ENST00000471751 PYGO1Q9Y3Y4 419 aa13.07□□□□□ -0.32
SNX4-203ENST00000471751 K7EP13 123 aa13.06□□□□□ -0.32
SNX4-203ENST00000471751 C2orf66Q6UXQ4 117 aa13.06□□□□□ -0.32
SNX4-203ENST00000471751 MRPL52Q86TS9 123 aaKnown RBP13.06□□□□□ -0.32
SNX4-203ENST00000471751 UBE2L6O14933 153 aa13.05□□□□□ -0.32
SNX4-203ENST00000471751 CASC10Q5T4H9 136 aa13.05□□□□□ -0.32
SNX4-203ENST00000471751 SPANXA1Q9NS26 97 aa13.05□□□□□ -0.32
SNX4-203ENST00000471751 C5orf52A6NGY3 159 aa13.04□□□□□ -0.32
SNX4-203ENST00000471751 DYNC2H1Q8NCM8 4307 aaKnown RBP13.03□□□□□ -0.32
SNX4-203ENST00000471751 BTF3P20290 206 aaKnown RBP13.03□□□□□ -0.32
SNX4-203ENST00000471751 PAPPA-AS1Q5QFB9 102 aa13.03□□□□□ -0.32
SNX4-203ENST00000471751 ERASQ7Z444 233 aa13.03□□□□□ -0.32
SNX4-203ENST00000471751 TIMM17AQ99595 171 aa13.03□□□□□ -0.32
SNX4-203ENST00000471751 CHCHD5Q9BSY4 110 aa13.03□□□□□ -0.32
SNX4-203ENST00000471751 A0A096LNJ9 63 aa13.02□□□□□ -0.33
SNX4-203ENST00000471751 NUPR1O60356 82 aa13.02□□□□□ -0.33
SNX4-203ENST00000471751 ATP5LO75964 103 aa13.02□□□□□ -0.33
SNX4-203ENST00000471751 PDZD11Q5EBL8 140 aa13.02□□□□□ -0.33
SNX4-203ENST00000471751 TMEM141Q96I45 108 aa13.02□□□□□ -0.33
SNX4-203ENST00000471751 MRPS36P82909 103 aaKnown RBP13.01□□□□□ -0.33
SNX4-203ENST00000471751 LINC00588Q9Y4M8 146 aa13.01□□□□□ -0.33
SNX4-203ENST00000471751 FGF6P10767 208 aa13□□□□□ -0.33
SNX4-203ENST00000471751 TMEM101Q96IK0 257 aa13□□□□□ -0.33
SNX4-203ENST00000471751 HSPB8Q9UJY1 196 aa13□□□□□ -0.33
SNX4-203ENST00000471751 UBE2D4Q9Y2X8 147 aa13□□□□□ -0.33
SNX4-203ENST00000471751 IGIPA6NJ69 53 aa12.99□□□□□ -0.33
SNX4-203ENST00000471751 LEPROTL1O95214 131 aa12.99□□□□□ -0.33
SNX4-203ENST00000471751 SNRPEP62304 92 aaKnown RBP12.99□□□□□ -0.33
SNX4-203ENST00000471751 LINC01556Q5JQF7 62 aa12.99□□□□□ -0.33
SNX4-203ENST00000471751 AMMECR1LQ6DCA0 310 aa12.99□□□□□ -0.33
SNX4-203ENST00000471751 DGAT2L7PQ6IED9 249 aa12.99□□□□□ -0.33
SNX4-203ENST00000471751 A0A087WX48 190 aa12.98□□□□□ -0.33
SNX4-203ENST00000471751 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.98□□□□□ -0.33
SNX4-203ENST00000471751 DNAH10OSP0CZ25 163 aa12.98□□□□□ -0.33
SNX4-203ENST00000471751 S100A2P29034 98 aa12.98□□□□□ -0.33
SNX4-203ENST00000471751 LGALS9CQ6DKI2 356 aa12.98□□□□□ -0.33
SNX4-203ENST00000471751 HIST3H2BBQ8N257 126 aa12.98□□□□□ -0.33
SNX4-203ENST00000471751 FAM19A2Q8N3H0 131 aa12.98□□□□□ -0.33
SNX4-203ENST00000471751 SCGB3A1Q96QR1 104 aa12.98□□□□□ -0.33
SNX4-203ENST00000471751 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.97□□□□□ -0.33
SNX4-203ENST00000471751 IGKV2-29A2NJV5 120 aaPredicted RBP12.97□□□□□ -0.33
SNX4-203ENST00000471751 TMEM262E9PQX1 116 aa12.97□□□□□ -0.33
SNX4-203ENST00000471751 RPL39P62891 51 aaKnown RBP12.97□□□□□ -0.33
SNX4-203ENST00000471751 CSMD3Q7Z407 3707 aa12.97□□□□□ -0.33
SNX4-203ENST00000471751 SIVA1O15304 175 aa12.96□□□□□ -0.33
SNX4-203ENST00000471751 UBE2DNLQ8IWF7 75 aa12.96□□□□□ -0.33
SNX4-203ENST00000471751 OR5A1Q8NGJ0 315 aa12.96□□□□□ -0.33
SNX4-203ENST00000471751 DEFB104AQ8WTQ1 72 aa12.96□□□□□ -0.33
SNX4-203ENST00000471751 TRAV9-2A0A087WT02 112 aa12.95□□□□□ -0.34
SNX4-203ENST00000471751 CCL25O15444 150 aa12.95□□□□□ -0.34
SNX4-203ENST00000471751 GAGE6Q13070 117 aa12.95□□□□□ -0.34
SNX4-203ENST00000471751 C10orf126Q8N4M7 172 aa12.95□□□□□ -0.34
SNX4-203ENST00000471751 CDC42SE2Q9NRR3 84 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms