RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 PRO1854Q9UHT4 67 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 A0A0G2JMZ2 1700 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 LRRC37A2A6NM11 1700 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 LRRC37AA6NMS7 1700 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 C4AP0C0L4 1744 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 C4BP0C0L5 1744 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.16□□□□□ -2.06
SCN3A-207ENST00000471697 MALRD1Q5VYJ5 2156 aa2.16□□□□□ -2.06
SCN3A-207ENST00000471697 DLEC1Q9Y238 1755 aa2.15□□□□□ -2.06
SCN3A-207ENST00000471697 ZNF236Q9UL36 1845 aa2.15□□□□□ -2.06
SCN3A-207ENST00000471697 IGKV1D-37A0A075B6S9 117 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 IGLV3-32A0A0A0MS00 114 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 TRBV30A0A0K0K1B3 111 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 CTXND1A0A1B0GTU2 59 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 A8MUU9 505 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 IQCF6A8MYZ5 107 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 C11orf94C9JXX5 98 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 DYNLT1P63172 113 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 C2orf82Q6UX34 121 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 TYMSOSQ8TAI1 123 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 LINC00474Q9P2X8 69 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 ICOSQ9Y6W8 199 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 U3KQK5 164 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 NRXN3Q9Y4C0 1643 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 MYO7BQ6PIF6 2116 aa2.15□□□□□ -2.07
SCN3A-207ENST00000471697 KIAA1549LQ6ZVL6 1849 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 HEATR5BQ9P2D3 2071 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 IGKV1D-17A0A075B6S4 117 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 IGHV3-15A0A0B4J1V0 119 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 TMEM30CPA0ZSE6 113 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 J3QRE1 110 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 LINC01565O15544 149 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 MIFP14174 115 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 HMGA1P17096 107 aaKnown RBP2.14□□□□□ -2.07
SCN3A-207ENST00000471697 CD24P25063 80 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 IGLV3-21P80748 117 aaPredicted RBP2.14□□□□□ -2.07
SCN3A-207ENST00000471697 C15orf32Q32M92 178 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 Q5W150 140 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 IGFL3Q6UXB1 125 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 ZNF818PQ6ZRF7 136 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 LYZL2Q7Z4W2 148 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 Q8NDZ9 215 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 NDUFA12Q9UI09 145 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 MUC4Q99102 2169 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 DUOX1Q9NRD9 1551 aa2.14□□□□□ -2.07
SCN3A-207ENST00000471697 IGHV3-73A0A0B4J1V6 119 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 A0A0J9YWU9 116 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 TEX49A0A1B0GTD5 131 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 LINC01549A6NIU2 74 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 ZNF815PA8K554 130 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 MGST1P10620 155 aaKnown RBP2.13□□□□□ -2.07
SCN3A-207ENST00000471697 SUPT4H1P63272 117 aaKnown RBP2.13□□□□□ -2.07
SCN3A-207ENST00000471697 C2orf83Q53S99 150 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 C9orf116Q5BN46 136 aaPredicted RBP2.13□□□□□ -2.07
SCN3A-207ENST00000471697 C20orf197Q8N268 126 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 Q8N6K4 173 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 TMEM105Q8N8V8 129 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 UBALD1Q8TB05 177 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 IMMP1LQ96LU5 166 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 CYSTM1Q9H1C7 97 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 UBE2D4Q9Y2X8 147 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 V9GYV3 84 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 NRAPQ86VF7 1730 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 CD163L1Q9NR16 1453 aa2.13□□□□□ -2.07
SCN3A-207ENST00000471697 COL11A1P12107 1806 aaPredicted RBP2.12□□□□□ -2.07
SCN3A-207ENST00000471697 LMO7Q8WWI1 1683 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 GOLGA4Q13439 2230 aaKnown RBP2.12□□□□□ -2.07
SCN3A-207ENST00000471697 KIAA0100Q14667 2235 aaKnown RBP2.12□□□□□ -2.07
SCN3A-207ENST00000471697 A0A096LNJ9 63 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 hDV103S1A0JD37 113 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 TMEM14DPA8MWL7 114 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 PANO1I0J062 215 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 PPP1R17O96001 155 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 IGLV1-47P01700 117 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 CLPSP04118 112 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 S100A3P33764 101 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 RPL28P46779 137 aaKnown RBP2.12□□□□□ -2.07
SCN3A-207ENST00000471697 KRTAP10-8P60410 259 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 LCE3CQ5T5A8 94 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 Q6ZR03 302 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 FAM223AQ8IWN6 122 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 C1orf64Q8NEQ6 169 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 RNF5Q99942 180 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 RETNLBQ9BQ08 111 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 WFDC6Q9BQY6 131 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 GFRA4Q9GZZ7 299 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 COL2A1P02458 1487 aaPredicted RBP2.12□□□□□ -2.07
SCN3A-207ENST00000471697 EML5Q05BV3 1969 aa2.12□□□□□ -2.07
SCN3A-207ENST00000471697 MYO16Q9Y6X6 1858 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 DIDO1Q9BTC0 2240 aaKnown RBP2.11□□□□□ -2.07
SCN3A-207ENST00000471697 NHSL1Q5SYE7 1610 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 TMSB15BA0A087X1C1 80 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 FAM223BA6NKX1 122 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 C17orf98A8MV24 154 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 C16orf90A8MZG2 172 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 HCG22E2RYF7 251 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 F8WEM9 126 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 H3BQ85 93 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 DNAH10OSP0CZ25 163 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms