RNA–Protein interactions for RNA: ENST00000471417.5

LINC01140-204, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 751 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-204ENST00000471417 PGLYRP4Q96LB8 373 aa5.99□□□□□ -1.45
LINC01140-204ENST00000471417 NIT2Q9NQR4 276 aa5.99□□□□□ -1.45
LINC01140-204ENST00000471417 AP5S1Q9NUS5 200 aa5.99□□□□□ -1.45
LINC01140-204ENST00000471417 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.98□□□□□ -1.45
LINC01140-204ENST00000471417 IGKV3OR2-268A0A0C4DH90 116 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 GAGE12HA6NDE8 117 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 PHOX2AO14813 284 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 AMTP48728 403 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 SULT1A2P50226 295 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 COX6A2Q02221 97 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 ODF1Q14990 250 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 HIGD2BQ4VC39 106 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 PRSS3P2Q8NHM4 247 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 RNF185Q96GF1 192 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 DPH3P1Q9H4G8 78 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 MANBALQ9NQG1 85 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 PLAC8Q9NZF1 115 aa5.98□□□□□ -1.45
LINC01140-204ENST00000471417 TRAV1-1A0A0B4J248 108 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 TRAV26-2A0A0B4J265 109 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 F2Z2F3 143 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 UBE2L6O14933 153 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 IFNA1P01562 189 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 TRGC1P0CF51 173 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 GNG4P50150 75 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 COTL1Q14019 142 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 GATD1Q8NB37 220 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 NUDT10Q8NFP7 164 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 NUDT11Q96G61 164 aa5.97□□□□□ -1.45
LINC01140-204ENST00000471417 RPS10P46783 165 aaKnown RBP5.96□□□□□ -1.46
LINC01140-204ENST00000471417 EIF5AP63241 154 aaKnown RBP5.96□□□□□ -1.46
LINC01140-204ENST00000471417 WDR73Q6P4I2 378 aa5.96□□□□□ -1.46
LINC01140-204ENST00000471417 Q6ZNX1 250 aa5.96□□□□□ -1.46
LINC01140-204ENST00000471417 C9orf62Q8N4C0 152 aa5.96□□□□□ -1.46
LINC01140-204ENST00000471417 RPL39LQ96EH5 51 aaKnown RBP5.96□□□□□ -1.46
LINC01140-204ENST00000471417 MED9Q9NWA0 146 aa5.96□□□□□ -1.46
LINC01140-204ENST00000471417 LRP2P98164 4655 aa5.96□□□□□ -1.46
LINC01140-204ENST00000471417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.95□□□□□ -1.46
LINC01140-204ENST00000471417 IGKV2-24A0A0C4DH68 120 aa5.95□□□□□ -1.46
LINC01140-204ENST00000471417 IGKV2-29A2NJV5 120 aaPredicted RBP5.95□□□□□ -1.46
LINC01140-204ENST00000471417 XKRY2A2RUG3 117 aa5.95□□□□□ -1.46
LINC01140-204ENST00000471417 CTRLP40313 264 aa5.95□□□□□ -1.46
LINC01140-204ENST00000471417 FOXA3P55318 350 aaPredicted RBP5.95□□□□□ -1.46
LINC01140-204ENST00000471417 MEF2BQ02080 365 aaPredicted RBP5.95□□□□□ -1.46
LINC01140-204ENST00000471417 TWIST1Q15672 202 aa5.95□□□□□ -1.46
LINC01140-204ENST00000471417 MAJINQ3KP22 176 aa5.95□□□□□ -1.46
LINC01140-204ENST00000471417 GTSF1Q8WW33 167 aa5.95□□□□□ -1.46
LINC01140-204ENST00000471417 CHCHD10Q8WYQ3 142 aaPredicted RBP5.95□□□□□ -1.46
LINC01140-204ENST00000471417 SMIM12Q96EX1 92 aa5.95□□□□□ -1.46
LINC01140-204ENST00000471417 K7EN84 100 aa5.94□□□□□ -1.46
LINC01140-204ENST00000471417 PDE6DO43924 150 aa5.94□□□□□ -1.46
LINC01140-204ENST00000471417 NDUFS6O75380 124 aaKnown RBP5.94□□□□□ -1.46
LINC01140-204ENST00000471417 RNASEKQ6P5S7 137 aaKnown RBP5.94□□□□□ -1.46
LINC01140-204ENST00000471417 CFAP161Q6P656 301 aa5.94□□□□□ -1.46
LINC01140-204ENST00000471417 LYPD6BQ8NI32 183 aa5.94□□□□□ -1.46
LINC01140-204ENST00000471417 LINC00526Q96FQ7 95 aa5.94□□□□□ -1.46
LINC01140-204ENST00000471417 CNFNQ9BYD5 112 aa5.94□□□□□ -1.46
LINC01140-204ENST00000471417 RNASE7Q9H1E1 156 aaKnown RBP5.94□□□□□ -1.46
LINC01140-204ENST00000471417 A0A096LNI7 61 aa5.93□□□□□ -1.46
LINC01140-204ENST00000471417 GVQW2A0A096LPI5 108 aaPredicted RBP5.93□□□□□ -1.46
LINC01140-204ENST00000471417 BCL2P10415 239 aa5.93□□□□□ -1.46
LINC01140-204ENST00000471417 FGF6P10767 208 aa5.93□□□□□ -1.46
LINC01140-204ENST00000471417 PRR3P79522 188 aaKnown RBP5.93□□□□□ -1.46
LINC01140-204ENST00000471417 FOXI1Q12951 378 aa5.93□□□□□ -1.46
LINC01140-204ENST00000471417 AMMECR1LQ6DCA0 310 aa5.93□□□□□ -1.46
LINC01140-204ENST00000471417 STPG4Q8N801 248 aa5.93□□□□□ -1.46
LINC01140-204ENST00000471417 OCC1Q8TAD7 63 aa5.93□□□□□ -1.46
LINC01140-204ENST00000471417 C7orf33Q8WU49 177 aa5.93□□□□□ -1.46
LINC01140-204ENST00000471417 FAM231BA6NCW3 169 aa5.92□□□□□ -1.46
LINC01140-204ENST00000471417 TEX46H3BTG2 121 aa5.92□□□□□ -1.46
LINC01140-204ENST00000471417 GAS8-AS1O95177 125 aa5.92□□□□□ -1.46
LINC01140-204ENST00000471417 LINC01600Q96MT4 127 aa5.92□□□□□ -1.46
LINC01140-204ENST00000471417 RPP21Q9H633 154 aaKnown RBP5.92□□□□□ -1.46
LINC01140-204ENST00000471417 BIN3Q9NQY0 253 aa5.92□□□□□ -1.46
LINC01140-204ENST00000471417 SDHAF1A6NFY7 115 aa5.91□□□□□ -1.46
LINC01140-204ENST00000471417 APCSP02743 223 aa5.91□□□□□ -1.46
LINC01140-204ENST00000471417 XCL1P47992 114 aa5.91□□□□□ -1.46
LINC01140-204ENST00000471417 LINC00959A0A1B0GUT2 108 aa5.9□□□□□ -1.46
LINC01140-204ENST00000471417 CCL25O15444 150 aa5.9□□□□□ -1.46
LINC01140-204ENST00000471417 NCR2O95944 276 aa5.9□□□□□ -1.46
LINC01140-204ENST00000471417 EIF5AL1Q6IS14 154 aaKnown RBP5.9□□□□□ -1.46
LINC01140-204ENST00000471417 OR5A1Q8NGJ0 315 aa5.9□□□□□ -1.46
LINC01140-204ENST00000471417 H7C423 109 aa5.89□□□□□ -1.47
LINC01140-204ENST00000471417 ESDP10768 282 aa5.89□□□□□ -1.47
LINC01140-204ENST00000471417 PMCHP20382 165 aa5.89□□□□□ -1.47
LINC01140-204ENST00000471417 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
LINC01140-204ENST00000471417 A0A0J9YXV3 536 aa5.88□□□□□ -1.47
LINC01140-204ENST00000471417 TRBV6-5A0A0K0K1A5 114 aa5.88□□□□□ -1.47
LINC01140-204ENST00000471417 I3L3M4 83 aa5.88□□□□□ -1.47
LINC01140-204ENST00000471417 GATCO43716 136 aaKnown RBP5.88□□□□□ -1.47
LINC01140-204ENST00000471417 TSHBP01222 138 aa5.88□□□□□ -1.47
LINC01140-204ENST00000471417 ZNF25P17030 456 aaPredicted RBP5.88□□□□□ -1.47
LINC01140-204ENST00000471417 SRSF9Q13242 221 aaKnown RBP eCLIP5.88□□□□□ -1.47
LINC01140-204ENST00000471417 SMIM15Q7Z3B0 74 aa5.88□□□□□ -1.47
LINC01140-204ENST00000471417 CARD19Q96LW7 228 aa5.88□□□□□ -1.47
LINC01140-204ENST00000471417 TMEM242Q9NWH2 141 aa5.88□□□□□ -1.47
LINC01140-204ENST00000471417 IGHV1-58A0A0C4DH39 117 aa5.87□□□□□ -1.47
LINC01140-204ENST00000471417 TEX261Q6UWH6 196 aa5.87□□□□□ -1.47
LINC01140-204ENST00000471417 SPINK6Q6UWN8 80 aa5.87□□□□□ -1.47
LINC01140-204ENST00000471417 SLC51BQ86UW2 128 aa5.87□□□□□ -1.47
LINC01140-204ENST00000471417 TMEM101Q96IK0 257 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms