RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 HOPXQ9BPY8 73 aaPredicted RBP-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.54□□□□□ -2.66
COMMD3-209ENST00000471350 OVOS2A0A0G2JMS6 1433 aa-1.54□□□□□ -2.66
COMMD3-209ENST00000471350 PIRTP0C851 137 aa-1.54□□□□□ -2.66
COMMD3-209ENST00000471350 ZNF818PQ6ZRF7 136 aa-1.54□□□□□ -2.66
COMMD3-209ENST00000471350 GID8Q9NWU2 228 aa-1.54□□□□□ -2.66
COMMD3-209ENST00000471350 R4GMQ9 66 aa-1.54□□□□□ -2.66
COMMD3-209ENST00000471350 PLXNB2O15031 1838 aa-1.54□□□□□ -2.66
COMMD3-209ENST00000471350 KDM3BQ7LBC6 1761 aa-1.54□□□□□ -2.66
COMMD3-209ENST00000471350 SPTBN4Q9H254 2564 aa-1.54□□□□□ -2.66
COMMD3-209ENST00000471350 SONP18583 2426 aaKnown RBP-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 GOLGA4Q13439 2230 aaKnown RBP-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 CCL18P55774 89 aa-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 DEFB135Q30KP9 77 aa-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 MNS1Q8NEH6 495 aa-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 DEFB105AQ8NG35 78 aa-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 VSTM2AQ8TAG5 236 aa-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 TSC2P49815 1807 aa-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 WNK3Q9BYP7 1800 aa-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 DNAH3Q8TD57 4116 aa-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 LRRC37A3O60309 1634 aa-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 PAPPAQ13219 1627 aa-1.55□□□□□ -2.66
COMMD3-209ENST00000471350 CTXND1A0A1B0GTU2 59 aa-1.56□□□□□ -2.66
COMMD3-209ENST00000471350 MT-ND4LP03901 98 aa-1.56□□□□□ -2.66
COMMD3-209ENST00000471350 SAMD13Q5VXD3 122 aa-1.56□□□□□ -2.66
COMMD3-209ENST00000471350 TOMM20LQ6UXN7 152 aa-1.56□□□□□ -2.66
COMMD3-209ENST00000471350 AGPAT4-IT1Q9H0P7 198 aa-1.56□□□□□ -2.66
COMMD3-209ENST00000471350 COX17Q14061 63 aa-1.57□□□□□ -2.66
COMMD3-209ENST00000471350 TMEM244Q5VVB8 128 aa-1.57□□□□□ -2.66
COMMD3-209ENST00000471350 CTAGE3PQ8IX95 158 aa-1.57□□□□□ -2.66
COMMD3-209ENST00000471350 DEFB123Q8N688 67 aa-1.57□□□□□ -2.66
COMMD3-209ENST00000471350 LINC00472Q9H8W2 130 aa-1.57□□□□□ -2.66
COMMD3-209ENST00000471350 LSM2Q9Y333 95 aaKnown RBP-1.57□□□□□ -2.66
COMMD3-209ENST00000471350 FAT3Q8TDW7 4589 aa-1.58□□□□□ -2.66
COMMD3-209ENST00000471350 M0R135 149 aa-1.58□□□□□ -2.66
COMMD3-209ENST00000471350 UBE2G1P62253 170 aa-1.58□□□□□ -2.66
COMMD3-209ENST00000471350 Q6JHZ5 121 aa-1.58□□□□□ -2.66
COMMD3-209ENST00000471350 PCBD2Q9H0N5 130 aa-1.58□□□□□ -2.66
COMMD3-209ENST00000471350 LRRC37A2A6NM11 1700 aa-1.58□□□□□ -2.66
COMMD3-209ENST00000471350 ERCC6Q03468 1493 aa-1.58□□□□□ -2.66
COMMD3-209ENST00000471350 DAPK1P53355 1430 aa-1.58□□□□□ -2.66
COMMD3-209ENST00000471350 PARP14Q460N5 1801 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 ARFGEF1Q9Y6D6 1849 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 RYR2Q92736 4967 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 TRBV20-1A0A075B6N2 111 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 PPP1R17O96001 155 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 TMEM128Q5BJH2 165 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 TMEM170BQ5T4T1 132 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 SPRR2FQ96RM1 72 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 SAR1AQ9NR31 198 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 LINC00312Q9Y6C7 94 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 VPS13DQ5THJ4 4388 aa-1.59□□□□□ -2.66
COMMD3-209ENST00000471350 MYH3P11055 1940 aa-1.6□□□□□ -2.66
COMMD3-209ENST00000471350 DNAH9Q9NYC9 4486 aa-1.6□□□□□ -2.67
COMMD3-209ENST00000471350 TCTE3Q8IZS6 198 aa-1.6□□□□□ -2.67
COMMD3-209ENST00000471350 SPTSSBQ8NFR3 76 aa-1.6□□□□□ -2.67
COMMD3-209ENST00000471350 GAPVD1Q14C86 1478 aa-1.61□□□□□ -2.67
COMMD3-209ENST00000471350 TMEM238C9JI98 176 aa-1.61□□□□□ -2.67
COMMD3-209ENST00000471350 PIPP12273 146 aaPredicted RBP-1.61□□□□□ -2.67
COMMD3-209ENST00000471350 NCS1P62166 190 aa-1.61□□□□□ -2.67
COMMD3-209ENST00000471350 RPS28P62857 69 aaKnown RBP-1.61□□□□□ -2.67
COMMD3-209ENST00000471350 E5RI56 91 aa-1.62□□□□□ -2.67
COMMD3-209ENST00000471350 CBLN1P23435 193 aa-1.62□□□□□ -2.67
COMMD3-209ENST00000471350 MRPL40Q9NQ50 206 aaKnown RBP-1.62□□□□□ -2.67
COMMD3-209ENST00000471350 PXDNQ92626 1479 aa-1.63□□□□□ -2.67
COMMD3-209ENST00000471350 NSD3Q9BZ95 1437 aa-1.63□□□□□ -2.67
COMMD3-209ENST00000471350 SYS1-DBNDD2H3BUS1 97 aa-1.63□□□□□ -2.67
COMMD3-209ENST00000471350 SCTP09683 121 aa-1.63□□□□□ -2.67
COMMD3-209ENST00000471350 CMPK1P30085 196 aa-1.63□□□□□ -2.67
COMMD3-209ENST00000471350 CCL8P80075 99 aa-1.63□□□□□ -2.67
COMMD3-209ENST00000471350 MIC13Q5XKP0 118 aa-1.63□□□□□ -2.67
COMMD3-209ENST00000471350 SKA2Q8WVK7 121 aaPredicted RBP-1.63□□□□□ -2.67
COMMD3-209ENST00000471350 NBASA2RRP1 2371 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 TRAV36DV7A0A075B6V5 113 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 NCR2O95944 276 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 IFNGP01579 166 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 IL5P05113 134 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 COX8AP10176 69 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 S100GP29377 79 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 DEFB112Q30KQ8 113 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 V9GYH0 126 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 LAMA2P24043 3122 aaKnown RBP-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 ARHGEF10O15013 1369 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 TEP1Q99973 2627 aaKnown RBP-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 HTTP42858 3142 aa-1.64□□□□□ -2.67
COMMD3-209ENST00000471350 A0A1B0GV72 72 aa-1.65□□□□□ -2.67
COMMD3-209ENST00000471350 TNFSF15O95150 251 aa-1.65□□□□□ -2.67
COMMD3-209ENST00000471350 MMGT1Q8N4V1 131 aa-1.65□□□□□ -2.67
COMMD3-209ENST00000471350 PSMG3Q9BT73 122 aaPredicted RBP-1.65□□□□□ -2.67
COMMD3-209ENST00000471350 POLA1P09884 1462 aaPredicted RBP-1.65□□□□□ -2.67
COMMD3-209ENST00000471350 MRC1P22897 1456 aa-1.65□□□□□ -2.67
COMMD3-209ENST00000471350 CASKIN1Q8WXD9 1431 aa-1.66□□□□□ -2.67
COMMD3-209ENST00000471350 DNAH2Q9P225 4427 aa-1.66□□□□□ -2.67
COMMD3-209ENST00000471350 A0A1B0GX51 115 aa-1.66□□□□□ -2.68
COMMD3-209ENST00000471350 SNCGO76070 127 aa-1.66□□□□□ -2.68
COMMD3-209ENST00000471350 APOC3P02656 99 aa-1.66□□□□□ -2.68
COMMD3-209ENST00000471350 TFAMQ00059 246 aaKnown RBP-1.66□□□□□ -2.68
COMMD3-209ENST00000471350 SCIMPQ6UWF3 145 aa-1.66□□□□□ -2.68
COMMD3-209ENST00000471350 SPANXCQ9NY87 97 aa-1.66□□□□□ -2.68
COMMD3-209ENST00000471350 HIGD1AQ9Y241 93 aa-1.66□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms