RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 IGHV1-24A0A0C4DH33 117 aa9.97□□□□□ -0.81
COL1A1-203ENST00000471344 MIAQ16674 131 aa9.97□□□□□ -0.81
COL1A1-203ENST00000471344 RASL11AQ6T310 242 aa9.97□□□□□ -0.81
COL1A1-203ENST00000471344 CNFNQ9BYD5 112 aa9.97□□□□□ -0.81
COL1A1-203ENST00000471344 GFRA4Q9GZZ7 299 aa9.97□□□□□ -0.81
COL1A1-203ENST00000471344 LRP1Q07954 4544 aaKnown RBP9.96□□□□□ -0.81
COL1A1-203ENST00000471344 IGLV4-60A0A075B6I1 120 aa9.96□□□□□ -0.82
COL1A1-203ENST00000471344 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.82
COL1A1-203ENST00000471344 TRAV26-2A0A0B4J265 109 aa9.96□□□□□ -0.82
COL1A1-203ENST00000471344 PRSS1P07477 247 aa9.96□□□□□ -0.82
COL1A1-203ENST00000471344 RPL23P62829 140 aaKnown RBP9.96□□□□□ -0.82
COL1A1-203ENST00000471344 FAM231DQ6ZW35 169 aa9.96□□□□□ -0.82
COL1A1-203ENST00000471344 C20orf203Q8NBC4 194 aa9.96□□□□□ -0.82
COL1A1-203ENST00000471344 CIRBP-AS1Q8TBR5 109 aa9.96□□□□□ -0.82
COL1A1-203ENST00000471344 CHAC1Q9BUX1 264 aa9.96□□□□□ -0.82
COL1A1-203ENST00000471344 DPH3P1Q9H4G8 78 aa9.96□□□□□ -0.82
COL1A1-203ENST00000471344 GATCO43716 136 aaKnown RBP9.95□□□□□ -0.82
COL1A1-203ENST00000471344 FOXA3P55318 350 aaPredicted RBP9.95□□□□□ -0.82
COL1A1-203ENST00000471344 PEA15Q15121 130 aa9.95□□□□□ -0.82
COL1A1-203ENST00000471344 TWIST1Q15672 202 aa9.95□□□□□ -0.82
COL1A1-203ENST00000471344 KRTAP10-4P60372 401 aaPredicted RBP9.94□□□□□ -0.82
COL1A1-203ENST00000471344 C14orf177Q52M58 125 aa9.94□□□□□ -0.82
COL1A1-203ENST00000471344 CLLU1Q5K131 121 aa9.94□□□□□ -0.82
COL1A1-203ENST00000471344 GATD1Q8NB37 220 aa9.94□□□□□ -0.82
COL1A1-203ENST00000471344 ISOC2Q96AB3 205 aa9.94□□□□□ -0.82
COL1A1-203ENST00000471344 TMEM243Q9BU79 118 aa9.94□□□□□ -0.82
COL1A1-203ENST00000471344 NIT2Q9NQR4 276 aa9.94□□□□□ -0.82
COL1A1-203ENST00000471344 FAT3Q8TDW7 4589 aa9.94□□□□□ -0.82
COL1A1-203ENST00000471344 PLA2G1BP04054 148 aaKnown RBP9.93□□□□□ -0.82
COL1A1-203ENST00000471344 REG3AQ06141 175 aa9.93□□□□□ -0.82
COL1A1-203ENST00000471344 TMEM241Q24JQ0 296 aa9.93□□□□□ -0.82
COL1A1-203ENST00000471344 ADIRFQ15847 76 aa9.92□□□□□ -0.82
COL1A1-203ENST00000471344 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
COL1A1-203ENST00000471344 PGLYRP4Q96LB8 373 aa9.92□□□□□ -0.82
COL1A1-203ENST00000471344 NAT8Q9UHE5 227 aa9.92□□□□□ -0.82
COL1A1-203ENST00000471344 V9GYV3 84 aa9.92□□□□□ -0.82
COL1A1-203ENST00000471344 PANO1I0J062 215 aa9.91□□□□□ -0.82
COL1A1-203ENST00000471344 RAB14P61106 215 aa9.91□□□□□ -0.82
COL1A1-203ENST00000471344 FAM74A3Q4VXF1 159 aa9.91□□□□□ -0.82
COL1A1-203ENST00000471344 OSTCQ9NRP0 149 aa9.91□□□□□ -0.82
COL1A1-203ENST00000471344 A0A1B0GUV1 79 aa9.9□□□□□ -0.82
COL1A1-203ENST00000471344 AMTP48728 403 aa9.9□□□□□ -0.82
COL1A1-203ENST00000471344 SMDT1Q9H4I9 107 aa9.9□□□□□ -0.82
COL1A1-203ENST00000471344 COTL1Q14019 142 aa9.89□□□□□ -0.83
COL1A1-203ENST00000471344 CT83Q5H943 113 aa9.89□□□□□ -0.83
COL1A1-203ENST00000471344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
COL1A1-203ENST00000471344 A8MWL6 223 aa9.88□□□□□ -0.83
COL1A1-203ENST00000471344 GAS8-AS1O95177 125 aa9.88□□□□□ -0.83
COL1A1-203ENST00000471344 SMIM15Q7Z3B0 74 aa9.88□□□□□ -0.83
COL1A1-203ENST00000471344 C9orf163Q8N9P6 203 aa9.88□□□□□ -0.83
COL1A1-203ENST00000471344 TSKUQ8WUA8 353 aa9.88□□□□□ -0.83
COL1A1-203ENST00000471344 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.87□□□□□ -0.83
COL1A1-203ENST00000471344 IGKV2-29A2NJV5 120 aaPredicted RBP9.87□□□□□ -0.83
COL1A1-203ENST00000471344 HIGD1CA8MV81 97 aa9.87□□□□□ -0.83
COL1A1-203ENST00000471344 UBE2L6O14933 153 aa9.87□□□□□ -0.83
COL1A1-203ENST00000471344 ADCYAP1P18509 176 aa9.87□□□□□ -0.83
COL1A1-203ENST00000471344 TRAV8-4A0A0B4J246 113 aa9.86□□□□□ -0.83
COL1A1-203ENST00000471344 IGKV3OR2-268A0A0C4DH90 116 aa9.86□□□□□ -0.83
COL1A1-203ENST00000471344 hDV102S1A0JD36 115 aa9.86□□□□□ -0.83
COL1A1-203ENST00000471344 J3QL48 77 aa9.86□□□□□ -0.83
COL1A1-203ENST00000471344 SLPIP03973 132 aa9.86□□□□□ -0.83
COL1A1-203ENST00000471344 DGAT2L7PQ6IED9 249 aa9.86□□□□□ -0.83
COL1A1-203ENST00000471344 SDIM1Q6ZPB5 146 aa9.85□□□□□ -0.83
COL1A1-203ENST00000471344 NUP35Q8NFH5 326 aa9.85□□□□□ -0.83
COL1A1-203ENST00000471344 FAM231BA6NCW3 169 aa9.84□□□□□ -0.83
COL1A1-203ENST00000471344 SDHAF1A6NFY7 115 aa9.84□□□□□ -0.83
COL1A1-203ENST00000471344 NCR2O95944 276 aa9.84□□□□□ -0.83
COL1A1-203ENST00000471344 HNRNPA3P51991 378 aaKnown RBP9.84□□□□□ -0.83
COL1A1-203ENST00000471344 SMIM27A0A1W2PRY6 76 aa9.83□□□□□ -0.84
COL1A1-203ENST00000471344 GAGE12HA6NDE8 117 aa9.83□□□□□ -0.84
COL1A1-203ENST00000471344 KRTAP29-1A8MX34 341 aaPredicted RBP9.83□□□□□ -0.84
COL1A1-203ENST00000471344 CNBPP62633 177 aaKnown RBP9.83□□□□□ -0.84
COL1A1-203ENST00000471344 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
COL1A1-203ENST00000471344 CLRN3Q8NCR9 226 aa9.83□□□□□ -0.84
COL1A1-203ENST00000471344 BORCS7Q96B45 105 aa9.83□□□□□ -0.84
COL1A1-203ENST00000471344 A0A1B0GUT8 65 aa9.82□□□□□ -0.84
COL1A1-203ENST00000471344 APCSP02743 223 aa9.82□□□□□ -0.84
COL1A1-203ENST00000471344 CHTF8P0CG12 524 aa9.82□□□□□ -0.84
COL1A1-203ENST00000471344 COMMD7Q86VX2 200 aa9.82□□□□□ -0.84
COL1A1-203ENST00000471344 RNF185Q96GF1 192 aa9.82□□□□□ -0.84
COL1A1-203ENST00000471344 TRBV6-5A0A0K0K1A5 114 aa9.81□□□□□ -0.84
COL1A1-203ENST00000471344 H7C423 109 aa9.81□□□□□ -0.84
COL1A1-203ENST00000471344 FGF6P10767 208 aa9.81□□□□□ -0.84
COL1A1-203ENST00000471344 RPS10P46783 165 aaKnown RBP9.81□□□□□ -0.84
COL1A1-203ENST00000471344 RPL37AP61513 92 aaKnown RBP9.81□□□□□ -0.84
COL1A1-203ENST00000471344 AMMECR1LQ6DCA0 310 aa9.81□□□□□ -0.84
COL1A1-203ENST00000471344 RNASEKQ6P5S7 137 aaKnown RBP9.81□□□□□ -0.84
COL1A1-203ENST00000471344 TSHBP01222 138 aa9.8□□□□□ -0.84
COL1A1-203ENST00000471344 HIGD2BQ4VC39 106 aa9.8□□□□□ -0.84
COL1A1-203ENST00000471344 CHCHD10Q8WYQ3 142 aaPredicted RBP9.8□□□□□ -0.84
COL1A1-203ENST00000471344 TMEM191AQ9H0A3 160 aa9.8□□□□□ -0.84
COL1A1-203ENST00000471344 TMEM242Q9NWH2 141 aa9.8□□□□□ -0.84
COL1A1-203ENST00000471344 TMEM218A2RU14 115 aa9.79□□□□□ -0.84
COL1A1-203ENST00000471344 LINC00862A6NCI5 91 aa9.79□□□□□ -0.84
COL1A1-203ENST00000471344 SMKR1H3BMG3 65 aa9.79□□□□□ -0.84
COL1A1-203ENST00000471344 PMCHP20382 165 aa9.79□□□□□ -0.84
COL1A1-203ENST00000471344 AMN1Q8IY45 258 aa9.79□□□□□ -0.84
COL1A1-203ENST00000471344 NAT8BQ9UHF3 227 aa9.79□□□□□ -0.84
COL1A1-203ENST00000471344 IGHV3-64A0A075B6Q5 118 aa9.78□□□□□ -0.84
COL1A1-203ENST00000471344 I3L3M4 83 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms