RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 LYRM9A8MSI8 78 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 ATP5LO75964 103 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 GAGE7O76087 117 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 GAGE12FP0CL80 117 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 GAGE12GP0CL81 117 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 GAGE12IP0CL82 117 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 RHOHQ15669 191 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 DEFB135Q30KP9 77 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 PET117Q6UWS5 81 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 Q6ZTI0 123 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 SPATA12Q7Z6I5 190 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 LINC00612Q8N6U2 182 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 IFI27L1Q96BM0 104 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 TRGV4A0A0C4DH28 118 aa4.32□□□□□ -1.72
SMNDC1-204ENST00000471297 TEX48A0A1B0GUV7 120 aa4.32□□□□□ -1.72
SMNDC1-204ENST00000471297 TRBV6-4A0A1B0GX49 114 aa4.32□□□□□ -1.72
SMNDC1-204ENST00000471297 G3V4G9 280 aa4.32□□□□□ -1.72
SMNDC1-204ENST00000471297 SYS1-DBNDD2H3BUS1 97 aa4.32□□□□□ -1.72
SMNDC1-204ENST00000471297 K7EQD1 137 aa4.32□□□□□ -1.72
SMNDC1-204ENST00000471297 RPL36AP83881 106 aaKnown RBP4.32□□□□□ -1.72
SMNDC1-204ENST00000471297 NEXN-AS1Q8NBZ9 246 aa4.32□□□□□ -1.72
SMNDC1-204ENST00000471297 TOMM6Q96B49 74 aa4.32□□□□□ -1.72
SMNDC1-204ENST00000471297 ZNF479Q96JC4 524 aa4.32□□□□□ -1.72
SMNDC1-204ENST00000471297 NF1P21359 2839 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 TRBV7-3A0A075B6L6 115 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 EMP1P54849 157 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 RIPPLY3P57055 190 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 LGALS9CQ6DKI2 356 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 DGAT2L7PQ6IED9 249 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 TEX43Q6ZNM6 134 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 Q8N976 141 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 SCGB3A1Q96QR1 104 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 PRADC1Q9BSG0 188 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 CYSLTR1Q9Y271 337 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 CUBNO60494 3623 aa4.31□□□□□ -1.72
SMNDC1-204ENST00000471297 IGHV4-28A0A0C4DH34 117 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 PRSS1P07477 247 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 SPART-AS1P0CW21 52 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 DEFB130BP0DP73 79 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 DEFB130AP0DP74 79 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 KPRPQ5T749 579 aaPredicted RBP4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 FAM222AQ5U5X8 452 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 LINC01545Q5VT33 79 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 C2orf66Q6UXQ4 117 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 Q6ZN92 141 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 LINC00173Q6ZV60 143 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 NEGR1Q7Z3B1 354 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 ERASQ7Z444 233 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 DAZ4Q86SG3 579 aaKnown RBP4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 Q8NAQ8 132 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 ZNRF2Q8NHG8 242 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 TMEM141Q96I45 108 aa4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 DAZ3Q9NR90 486 aaKnown RBP4.3□□□□□ -1.72
SMNDC1-204ENST00000471297 TRAV9-2A0A087WT02 112 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 TRAV12-1A0A0B4J245 112 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 TSHBP01222 138 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 P0DMU3 169 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 FAM231AP0DMU4 169 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 FAM231CP0DMU5 169 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 UBE2D3P61077 147 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 DAD1P61803 113 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 PKIAP61925 76 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 UBE2D2P62837 147 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 SMAGPQ0VAQ4 97 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 COTL1Q14019 142 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 TMEM97Q5BJF2 176 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 SLC25A29Q8N8R3 303 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 C20orf203Q8NBC4 194 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 TIMM17AQ99595 171 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 VAMP8Q9BV40 100 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 HHLA3Q9XRX5 114 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 JMJD1CQ15652 2540 aa4.29□□□□□ -1.72
SMNDC1-204ENST00000471297 SETD2Q9BYW2 2564 aaPredicted RBP4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 A0A087WX48 190 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 GAGE12JA6NER3 117 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 IGIPA6NJ69 53 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 HSBP1L1C9JCN9 74 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 H0Y8G0 127 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 CRYBA4P53673 196 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 GAGE1Q13065 139 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 GAGE4Q13068 117 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 GAGE5Q13069 117 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 LURAP1LQ8IV03 231 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 ZNF664Q8N3J9 261 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 PHLDA1Q8WV24 401 aaPredicted RBP4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 GTSF1LQ9H1H1 148 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 C11orf68Q9H3H3 251 aaKnown RBP4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 PRO0255Q9UI72 69 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 PYGO1Q9Y3Y4 419 aa4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 TEP1Q99973 2627 aaKnown RBP4.28□□□□□ -1.72
SMNDC1-204ENST00000471297 TSTD3H0UI37 97 aa4.27□□□□□ -1.73
SMNDC1-204ENST00000471297 H7C423 109 aa4.27□□□□□ -1.73
SMNDC1-204ENST00000471297 ATP5G1P05496 136 aa4.27□□□□□ -1.73
SMNDC1-204ENST00000471297 PMVKQ15126 192 aa4.27□□□□□ -1.73
SMNDC1-204ENST00000471297 SPATA45Q537H7 98 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 231.5 ms