RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 TCL1AP56279 114 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 SKP1P63208 163 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 QRFPP83859 136 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 KLRD1Q13241 179 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 MED21Q13503 144 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 C9orf116Q5BN46 136 aaPredicted RBP-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 HIST2H3PS2Q5TEC6 136 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 SLC25A26Q70HW3 274 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 C20orf196Q8IYI0 205 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 ANKRD29Q8N6D5 301 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 PXT1Q8NFP0 134 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 SLC25A40Q8TBP6 338 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 PPP1R2P1Q96PQ5 205 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 TP53RKQ96S44 253 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 LYSMD1Q96S90 227 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 GPER1Q99527 375 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 PARD6GQ9BYG4 376 aaPredicted RBP-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 FGFR1OP2Q9NVK5 253 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 KAAG1Q9UBP8 84 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 PRO0255Q9UI72 69 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 S4R3F8 94 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 A0A096LNI7 61 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 TRAV2A0A0B4J234 112 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 FAM159BA6NKW6 160 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 A8MTW9 85 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 F8W1H4 67 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 H3BRM9 83 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 H3BUA1 57 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 J3QRK9 145 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 BCE1O60756 84 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 SERPINA1P01009 418 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 SERPINE1P05121 402 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 GYPBP06028 91 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 APELAP0DMC3 54 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 HTN1P15515 57 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 HIST1H1TP22492 207 aaPredicted RBP-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 ANP32AP39687 249 aaKnown RBP-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 OMPP47874 163 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 LCN6P62502 163 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 UBE2BP63146 152 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 MRPS15P82914 257 aaKnown RBP-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 DIAPH2-AS1Q14236 149 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 TSNQ15631 228 aaKnown RBP-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 IQCJQ1A5X6 159 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 SPATA45Q537H7 98 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 AKIRIN2Q53H80 203 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 OGFRL1Q5TC84 451 aaPredicted RBP-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 SAMD13Q5VXD3 122 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 C2orf82Q6UX34 121 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 C6orf201Q7Z4U5 140 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 MMGT1Q8N4V1 131 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 GDPD1Q8N9F7 314 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 OR51A4Q8NGJ6 313 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 OR51A2Q8NGJ7 313 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 SLC35B4Q969S0 331 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 DGCR14Q96DF8 476 aaKnown RBP-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 USMG5Q96IX5 58 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 CCDC115Q96NT0 180 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 RTL8AQ9BWD3 113 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 C20orf27Q9GZN8 174 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 TMEM138Q9NPI0 162 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 LSM5Q9Y4Y9 91 aaKnown RBP-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 ASB4Q9Y574 426 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 HILPDAQ9Y5L2 63 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 TMEM56-RWDD3S4R434 201 aa-0.31□□□□□ -2.46
UBXN4-207ENST00000471246 TRAV23DV6A0A075B6W5 121 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 TRAV27A0A087WT01 109 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 TRAV1-2A0A0B4J238 106 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 LOC107984640A0A0U1RRK4 108 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 FAM92AA1XBS5 289 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 ZNF727A8MUV8 499 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 NDUFB3O43676 98 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 GGCTO75223 188 aaKnown RBP-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 OR2H2O95918 312 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 RBP4P02753 201 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 OR10J4P0C629 311 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 NEFHP12036 1026 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 RPS3P23396 243 aaKnown RBP eCLIP-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 SRP9P49458 86 aaKnown RBP-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 TPPP2P59282 170 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 FXYD4P59646 89 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 PRLHP81277 87 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 REEP5Q00765 189 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 SPAG11BQ08648 103 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 TMED1Q13445 227 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 ZNF833PQ6ZTB9 187 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 TEN1Q86WV5 123 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 C4orf33Q8N1A6 199 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 MORN4Q8NDC4 146 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 OR2T10Q8NGZ9 312 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 LCN9Q8WX39 176 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 PLEKHB2Q96CS7 222 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 SLAMF6Q96DU3 332 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 ADAT3Q96EY9 351 aaPredicted RBP-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 BTF3L4Q96K17 158 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 HIST1H2BLQ99880 126 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 SELENOSQ9BQE4 189 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 PSMG3Q9BT73 122 aaPredicted RBP-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms