RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 RPL19P84098 196 aaKnown RBP3.73□□□□□ -1.81
GPNMB-208ENST00000470994 ZNF674Q2M3X9 581 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 MPV17L2Q567V2 206 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 DNLZQ5SXM8 178 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 PRR27Q6MZM9 219 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 ATRAIDQ6UW56 229 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 BAGE2Q86Y30 109 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 NEXN-AS1Q8NBZ9 246 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 OR10AG1Q8NH19 301 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 IGLV10-54A0A075B6I4 117 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 ARPC5O15511 151 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 LTAP01374 205 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 MGPP08493 103 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 GIPP09681 153 aaPredicted RBP3.72□□□□□ -1.81
GPNMB-208ENST00000470994 PKIAP61925 76 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 RBX1P62877 108 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 MIAQ16674 131 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 LINC00269Q8N2A0 174 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 OR10G8Q8NGN5 311 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 SFT2D1Q8WV19 159 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 DERL1Q9BUN8 251 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 TPPP3Q9BW30 176 aa3.72□□□□□ -1.81
GPNMB-208ENST00000470994 TRBV25-1A0A075B6N4 114 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 hDV102S1A0JD36 115 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 PFDN1O60925 122 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 S100A9P06702 114 aaKnown RBP3.71□□□□□ -1.82
GPNMB-208ENST00000470994 FHITP49789 147 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 HNRNPA3P51991 378 aaKnown RBP3.71□□□□□ -1.82
GPNMB-208ENST00000470994 KRTAP10-4P60372 401 aaPredicted RBP3.71□□□□□ -1.82
GPNMB-208ENST00000470994 TMEM97Q5BJF2 176 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 DGAT2L7PQ6IED9 249 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 COX8CQ7Z4L0 72 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 C9orf163Q8N9P6 203 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 FAM213BQ8TBF2 198 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 DPH3P1Q9H4G8 78 aa3.71□□□□□ -1.82
GPNMB-208ENST00000470994 IGHV1-24A0A0C4DH33 117 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 IGKV3OR2-268A0A0C4DH90 116 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 A0A0D9SG52 128 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 TRBV6-1A0A0K0K1D8 114 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 SMLR1H3BR10 107 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 REG3AQ06141 175 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 SDIM1Q6ZPB5 146 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 NTM-AS1Q6ZSK4 140 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 TMUB2Q71RG4 321 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 KCNRGQ8N5I3 272 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 TCEAL7Q9BRU2 100 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 CYTL1Q9NRR1 136 aa3.7□□□□□ -1.82
GPNMB-208ENST00000470994 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.69□□□□□ -1.82
GPNMB-208ENST00000470994 H7C1H1 209 aa3.69□□□□□ -1.82
GPNMB-208ENST00000470994 PANO1I0J062 215 aa3.69□□□□□ -1.82
GPNMB-208ENST00000470994 UBE2L6O14933 153 aa3.69□□□□□ -1.82
GPNMB-208ENST00000470994 GZMBP10144 247 aa3.69□□□□□ -1.82
GPNMB-208ENST00000470994 SULT1A2P50226 295 aa3.69□□□□□ -1.82
GPNMB-208ENST00000470994 NKX2-5P52952 324 aaPredicted RBP3.69□□□□□ -1.82
GPNMB-208ENST00000470994 KRTAP13-3Q3SY46 172 aa3.69□□□□□ -1.82
GPNMB-208ENST00000470994 OR2D3Q8NGH3 330 aa3.69□□□□□ -1.82
GPNMB-208ENST00000470994 AP1S3Q96PC3 154 aa3.69□□□□□ -1.82
GPNMB-208ENST00000470994 TMEM243Q9BU79 118 aa3.69□□□□□ -1.82
GPNMB-208ENST00000470994 IGHV3-64A0A075B6Q5 118 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 M0QY20 66 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 SNAI2O43623 268 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 CXCL1P09341 107 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 OR5AL1P0C617 328 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 CHTF8P0CG12 524 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 IQCJQ1A5X6 159 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 FER1L6-AS1Q8NA97 138 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 GTSF1Q8WW33 167 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 MBD3L1Q8WWY6 194 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 VAX2Q9UIW0 290 aa3.68□□□□□ -1.82
GPNMB-208ENST00000470994 MYCBP2O75592 4640 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 IGLV4-60A0A075B6I1 120 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 TRAV8-4A0A0B4J246 113 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 IGKV2-24A0A0C4DH68 120 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 KANTRA0A1W2PQU2 76 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 UMAD1C9J7I0 102 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 IFNA1P01562 189 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 P01737 135 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 RPL35P42766 123 aaKnown RBP3.67□□□□□ -1.82
GPNMB-208ENST00000470994 RPS20P60866 119 aaKnown RBP3.67□□□□□ -1.82
GPNMB-208ENST00000470994 CACNG7P62955 275 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 COTL1Q14019 142 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 MAJINQ3KP22 176 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 HIGD2BQ4VC39 106 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 AMMECR1LQ6DCA0 310 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 WDR73Q6P4I2 378 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 CFAP161Q6P656 301 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 KRTAP26-1Q6PEX3 210 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 RASL11AQ6T310 242 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 Q6ZRU5 148 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 C20orf203Q8NBC4 194 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 LYPD6BQ8NI32 183 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 C7orf33Q8WU49 177 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 GNG13Q9P2W3 67 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 KIF25-AS1Q9Y6Z4 181 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 VPS13BQ7Z7G8 4022 aa3.67□□□□□ -1.82
GPNMB-208ENST00000470994 XKRY2A2RUG3 117 aa3.66□□□□□ -1.82
GPNMB-208ENST00000470994 RAB19A4D1S5 217 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms