RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 RASL11AQ6T310 242 aa12.35□□□□□ -0.43
GCFC2-207ENST00000470503 MEF2BQ02080 365 aaPredicted RBP12.34□□□□□ -0.43
GCFC2-207ENST00000470503 WDR73Q6P4I2 378 aa12.34□□□□□ -0.43
GCFC2-207ENST00000470503 CFAP161Q6P656 301 aa12.34□□□□□ -0.43
GCFC2-207ENST00000470503 NIT2Q9NQR4 276 aa12.34□□□□□ -0.43
GCFC2-207ENST00000470503 TRBV20OR9-2A0A075B6H5 130 aa12.33□□□□□ -0.44
GCFC2-207ENST00000470503 UBE2L6O14933 153 aa12.33□□□□□ -0.44
GCFC2-207ENST00000470503 MT1HL1P0DM35 61 aa12.33□□□□□ -0.44
GCFC2-207ENST00000470503 LYZL1Q6UWQ5 148 aa12.33□□□□□ -0.44
GCFC2-207ENST00000470503 Q6ZNX1 250 aa12.33□□□□□ -0.44
GCFC2-207ENST00000470503 C9orf62Q8N4C0 152 aa12.33□□□□□ -0.44
GCFC2-207ENST00000470503 BIN3Q9NQY0 253 aa12.33□□□□□ -0.44
GCFC2-207ENST00000470503 A0A087WYN8 130 aa12.32□□□□□ -0.44
GCFC2-207ENST00000470503 IFNA1P01562 189 aa12.32□□□□□ -0.44
GCFC2-207ENST00000470503 NKX2-5P52952 324 aaPredicted RBP12.32□□□□□ -0.44
GCFC2-207ENST00000470503 MED9Q9NWA0 146 aa12.32□□□□□ -0.44
GCFC2-207ENST00000470503 IGLV4-60A0A075B6I1 120 aa12.31□□□□□ -0.44
GCFC2-207ENST00000470503 NTF3P20783 257 aa12.31□□□□□ -0.44
GCFC2-207ENST00000470503 SPACA4Q8TDM5 124 aa12.31□□□□□ -0.44
GCFC2-207ENST00000470503 DPH3P1Q9H4G8 78 aa12.31□□□□□ -0.44
GCFC2-207ENST00000470503 UBR4Q5T4S7 5183 aa12.31□□□□□ -0.44
GCFC2-207ENST00000470503 COTL1Q14019 142 aa12.3□□□□□ -0.44
GCFC2-207ENST00000470503 NUDT10Q8NFP7 164 aa12.3□□□□□ -0.44
GCFC2-207ENST00000470503 C7orf33Q8WU49 177 aa12.3□□□□□ -0.44
GCFC2-207ENST00000470503 NUDT11Q96G61 164 aa12.3□□□□□ -0.44
GCFC2-207ENST00000470503 PLAC8Q9NZF1 115 aa12.3□□□□□ -0.44
GCFC2-207ENST00000470503 SLPIP03973 132 aa12.29□□□□□ -0.44
GCFC2-207ENST00000470503 BCL2P10415 239 aa12.29□□□□□ -0.44
GCFC2-207ENST00000470503 TCTE3Q8IZS6 198 aa12.29□□□□□ -0.44
GCFC2-207ENST00000470503 CNFNQ9BYD5 112 aa12.29□□□□□ -0.44
GCFC2-207ENST00000470503 CTRLP40313 264 aa12.28□□□□□ -0.44
GCFC2-207ENST00000470503 AMTP48728 403 aa12.28□□□□□ -0.44
GCFC2-207ENST00000470503 GFRA4Q9GZZ7 299 aa12.28□□□□□ -0.44
GCFC2-207ENST00000470503 TAGLN2P37802 199 aaKnown RBP12.27□□□□□ -0.45
GCFC2-207ENST00000470503 RPS10P46783 165 aaKnown RBP12.26□□□□□ -0.45
GCFC2-207ENST00000470503 SLC51BQ86UW2 128 aa12.26□□□□□ -0.45
GCFC2-207ENST00000470503 H7C423 109 aa12.25□□□□□ -0.45
GCFC2-207ENST00000470503 NDUFS6O75380 124 aaKnown RBP12.25□□□□□ -0.45
GCFC2-207ENST00000470503 CHTF8P0CG12 524 aa12.25□□□□□ -0.45
GCFC2-207ENST00000470503 PKIGQ9Y2B9 76 aa12.25□□□□□ -0.45
GCFC2-207ENST00000470503 hCG_2014768A0A024R1R8 64 aa12.24□□□□□ -0.45
GCFC2-207ENST00000470503 GAGE12HA6NDE8 117 aa12.24□□□□□ -0.45
GCFC2-207ENST00000470503 NCR2O95944 276 aa12.24□□□□□ -0.45
GCFC2-207ENST00000470503 TWIST1Q15672 202 aa12.24□□□□□ -0.45
GCFC2-207ENST00000470503 AKAP14Q86UN6 197 aa12.24□□□□□ -0.45
GCFC2-207ENST00000470503 C15orf56Q8N910 161 aa12.24□□□□□ -0.45
GCFC2-207ENST00000470503 GATD1Q8NB37 220 aa12.24□□□□□ -0.45
GCFC2-207ENST00000470503 OCC1Q8TAD7 63 aa12.24□□□□□ -0.45
GCFC2-207ENST00000470503 K7EN84 100 aa12.23□□□□□ -0.45
GCFC2-207ENST00000470503 RNASE7Q9H1E1 156 aaKnown RBP12.23□□□□□ -0.45
GCFC2-207ENST00000470503 RPP21Q9H633 154 aaKnown RBP12.23□□□□□ -0.45
GCFC2-207ENST00000470503 PHOX2AO14813 284 aa12.22□□□□□ -0.45
GCFC2-207ENST00000470503 COX6A2Q02221 97 aa12.22□□□□□ -0.45
GCFC2-207ENST00000470503 AMMECR1LQ6DCA0 310 aa12.22□□□□□ -0.45
GCFC2-207ENST00000470503 TEX261Q6UWH6 196 aa12.22□□□□□ -0.45
GCFC2-207ENST00000470503 LINC00474Q9P2X8 69 aa12.21□□□□□ -0.45
GCFC2-207ENST00000470503 GVQW2A0A096LPI5 108 aaPredicted RBP12.2□□□□□ -0.46
GCFC2-207ENST00000470503 SMIM15Q7Z3B0 74 aa12.2□□□□□ -0.46
GCFC2-207ENST00000470503 GTSF1Q8WW33 167 aa12.2□□□□□ -0.46
GCFC2-207ENST00000470503 CHCHD10Q8WYQ3 142 aaPredicted RBP12.2□□□□□ -0.46
GCFC2-207ENST00000470503 FAM210AQ96ND0 272 aa12.2□□□□□ -0.46
GCFC2-207ENST00000470503 TRAV26-2A0A0B4J265 109 aa12.19□□□□□ -0.46
GCFC2-207ENST00000470503 MAJINQ3KP22 176 aa12.19□□□□□ -0.46
GCFC2-207ENST00000470503 LINC01600Q96MT4 127 aa12.19□□□□□ -0.46
GCFC2-207ENST00000470503 ZNF25P17030 456 aaPredicted RBP12.18□□□□□ -0.46
GCFC2-207ENST00000470503 FOXA3P55318 350 aaPredicted RBP12.18□□□□□ -0.46
GCFC2-207ENST00000470503 PRSS3P2Q8NHM4 247 aa12.18□□□□□ -0.46
GCFC2-207ENST00000470503 IGKV3OR2-268A0A0C4DH90 116 aa12.17□□□□□ -0.46
GCFC2-207ENST00000470503 TMEM250H0YL14 139 aa12.17□□□□□ -0.46
GCFC2-207ENST00000470503 APCSP02743 223 aa12.17□□□□□ -0.46
GCFC2-207ENST00000470503 RNASEKQ6P5S7 137 aaKnown RBP12.17□□□□□ -0.46
GCFC2-207ENST00000470503 RPL39LQ96EH5 51 aaKnown RBP12.17□□□□□ -0.46
GCFC2-207ENST00000470503 IGKV2-24A0A0C4DH68 120 aa12.16□□□□□ -0.46
GCFC2-207ENST00000470503 PRR3P79522 188 aaKnown RBP12.16□□□□□ -0.46
GCFC2-207ENST00000470503 HIGD2BQ4VC39 106 aa12.16□□□□□ -0.46
GCFC2-207ENST00000470503 FAM231DQ6ZW35 169 aa12.16□□□□□ -0.46
GCFC2-207ENST00000470503 STPG4Q8N801 248 aa12.16□□□□□ -0.46
GCFC2-207ENST00000470503 GATCO43716 136 aaKnown RBP12.15□□□□□ -0.46
GCFC2-207ENST00000470503 FGF6P10767 208 aa12.15□□□□□ -0.46
GCFC2-207ENST00000470503 OR5A1Q8NGJ0 315 aa12.15□□□□□ -0.46
GCFC2-207ENST00000470503 LYPD6BQ8NI32 183 aa12.15□□□□□ -0.46
GCFC2-207ENST00000470503 BTF3L4Q96K17 158 aa12.15□□□□□ -0.46
GCFC2-207ENST00000470503 SDHAF1A6NFY7 115 aa12.14□□□□□ -0.47
GCFC2-207ENST00000470503 A8MWL6 223 aa12.14□□□□□ -0.47
GCFC2-207ENST00000470503 BLOC1S1P78537 153 aa12.14□□□□□ -0.47
GCFC2-207ENST00000470503 TNXBP22105 4242 aa12.13□□□□□ -0.47
GCFC2-207ENST00000470503 TRBV6-5A0A0K0K1A5 114 aa12.13□□□□□ -0.47
GCFC2-207ENST00000470503 I3L3M4 83 aa12.13□□□□□ -0.47
GCFC2-207ENST00000470503 FOXI1Q12951 378 aa12.13□□□□□ -0.47
GCFC2-207ENST00000470503 SPINK6Q6UWN8 80 aa12.13□□□□□ -0.47
GCFC2-207ENST00000470503 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
GCFC2-207ENST00000470503 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.12□□□□□ -0.47
GCFC2-207ENST00000470503 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
GCFC2-207ENST00000470503 IGKV2-29A2NJV5 120 aaPredicted RBP12.12□□□□□ -0.47
GCFC2-207ENST00000470503 FAM231BA6NCW3 169 aa12.12□□□□□ -0.47
GCFC2-207ENST00000470503 CT83Q5H943 113 aa12.12□□□□□ -0.47
GCFC2-207ENST00000470503 REG3GQ6UW15 175 aa12.12□□□□□ -0.47
GCFC2-207ENST00000470503 A0A0J9YXV3 536 aa12.11□□□□□ -0.47
GCFC2-207ENST00000470503 A0A096LNI7 61 aa12.1□□□□□ -0.47
GCFC2-207ENST00000470503 A0A1B0GVG6 124 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms