RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 TACC2O95359 2948 aa12.59□□□□□ -0.39
HOXB3-205ENST00000470495 ZNF80P51504 273 aaPredicted RBP12.58□□□□□ -0.39
HOXB3-205ENST00000470495 SMAD5-AS1Q9Y6J3 95 aa12.58□□□□□ -0.39
HOXB3-205ENST00000470495 PF4P02776 101 aa12.58□□□□□ -0.4
HOXB3-205ENST00000470495 CRIP1P50238 77 aa12.58□□□□□ -0.4
HOXB3-205ENST00000470495 F8W735 103 aaPredicted RBP12.58□□□□□ -0.4
HOXB3-205ENST00000470495 LINC00643Q86TS7 51 aa12.58□□□□□ -0.4
HOXB3-205ENST00000470495 TIRAPP58753 221 aa12.58□□□□□ -0.4
HOXB3-205ENST00000470495 SOSTDC1Q6X4U4 206 aa12.58□□□□□ -0.4
HOXB3-205ENST00000470495 SDIM1Q6ZPB5 146 aa12.58□□□□□ -0.4
HOXB3-205ENST00000470495 LINC01587Q99440 93 aa12.58□□□□□ -0.4
HOXB3-205ENST00000470495 A0A1B0GXF2 115 aa12.57□□□□□ -0.4
HOXB3-205ENST00000470495 DPH3Q96FX2 82 aa12.57□□□□□ -0.4
HOXB3-205ENST00000470495 Q6ZS46 218 aa12.57□□□□□ -0.4
HOXB3-205ENST00000470495 PRRC2AP48634 2157 aaKnown RBP12.57□□□□□ -0.4
HOXB3-205ENST00000470495 IGHG2P01859 326 aa12.56□□□□□ -0.4
HOXB3-205ENST00000470495 ZNRF2Q8NHG8 242 aa12.56□□□□□ -0.4
HOXB3-205ENST00000470495 IGHV3OR16-12A0A075B7B8 117 aa12.56□□□□□ -0.4
HOXB3-205ENST00000470495 TRAV26-2A0A0B4J265 109 aa12.56□□□□□ -0.4
HOXB3-205ENST00000470495 ZFAND3Q9H8U3 227 aa12.56□□□□□ -0.4
HOXB3-205ENST00000470495 C14orf178Q8N769 122 aaPredicted RBP12.56□□□□□ -0.4
HOXB3-205ENST00000470495 ABCA2Q9BZC7 2435 aa12.56□□□□□ -0.4
HOXB3-205ENST00000470495 A6NDX4 124 aa12.55□□□□□ -0.4
HOXB3-205ENST00000470495 AVPP01185 164 aa12.55□□□□□ -0.4
HOXB3-205ENST00000470495 SMIM26A0A096LP01 95 aa12.55□□□□□ -0.4
HOXB3-205ENST00000470495 ANKRD17O75179 2603 aaKnown RBP12.55□□□□□ -0.4
HOXB3-205ENST00000470495 IGHV7-4-1A0A0J9YVY3 117 aa12.54□□□□□ -0.4
HOXB3-205ENST00000470495 ACYP1P07311 99 aa12.54□□□□□ -0.4
HOXB3-205ENST00000470495 RPS28P62857 69 aaKnown RBP12.54□□□□□ -0.4
HOXB3-205ENST00000470495 KLHL30-AS1Q8NEE0 82 aa12.54□□□□□ -0.4
HOXB3-205ENST00000470495 MDFICQ9P1T7 246 aa12.54□□□□□ -0.4
HOXB3-205ENST00000470495 A0A0B4J2C4 111 aa12.54□□□□□ -0.4
HOXB3-205ENST00000470495 GHRHP01286 108 aa12.54□□□□□ -0.4
HOXB3-205ENST00000470495 ELANEP08246 267 aa12.54□□□□□ -0.4
HOXB3-205ENST00000470495 GATA1P15976 413 aaPredicted RBP12.54□□□□□ -0.4
HOXB3-205ENST00000470495 RELNP78509 3460 aa12.53□□□□□ -0.4
HOXB3-205ENST00000470495 INAFM2P0DMQ5 153 aa12.53□□□□□ -0.4
HOXB3-205ENST00000470495 TRBV10-2A0A0K0K1G8 114 aa12.52□□□□□ -0.4
HOXB3-205ENST00000470495 LGALS9O00182 355 aa12.52□□□□□ -0.4
HOXB3-205ENST00000470495 DEFB136Q30KP8 78 aa12.52□□□□□ -0.4
HOXB3-205ENST00000470495 CEMP1Q6PRD7 247 aaPredicted RBP12.52□□□□□ -0.4
HOXB3-205ENST00000470495 C10orf99Q6UWK7 81 aa12.52□□□□□ -0.4
HOXB3-205ENST00000470495 TRAV23DV6A0A075B6W5 121 aa12.52□□□□□ -0.41
HOXB3-205ENST00000470495 SERP2Q8N6R1 65 aa12.52□□□□□ -0.41
HOXB3-205ENST00000470495 SLC25A29Q8N8R3 303 aa12.51□□□□□ -0.41
HOXB3-205ENST00000470495 TRAV12-2A0A075B6T6 113 aa12.51□□□□□ -0.41
HOXB3-205ENST00000470495 TRBV6-1A0A0K0K1D8 114 aa12.51□□□□□ -0.41
HOXB3-205ENST00000470495 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
HOXB3-205ENST00000470495 ZNF22P17026 224 aaPredicted RBP12.51□□□□□ -0.41
HOXB3-205ENST00000470495 LAGE3Q14657 143 aa12.5□□□□□ -0.41
HOXB3-205ENST00000470495 ZNF843Q8N446 348 aa12.5□□□□□ -0.41
HOXB3-205ENST00000470495 H3BT86 120 aa12.5□□□□□ -0.41
HOXB3-205ENST00000470495 H3BUA1 57 aa12.5□□□□□ -0.41
HOXB3-205ENST00000470495 COL12A1Q99715 3063 aa12.5□□□□□ -0.41
HOXB3-205ENST00000470495 SPINK13Q1W4C9 94 aa12.49□□□□□ -0.41
HOXB3-205ENST00000470495 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
HOXB3-205ENST00000470495 GNRH2O43555 120 aa12.49□□□□□ -0.41
HOXB3-205ENST00000470495 IGF1P05019 195 aa12.49□□□□□ -0.41
HOXB3-205ENST00000470495 HIST2H2BCQ6DN03 193 aa12.49□□□□□ -0.41
HOXB3-205ENST00000470495 MTORP42345 2549 aa12.48□□□□□ -0.41
HOXB3-205ENST00000470495 A0A087WWL8 130 aa12.48□□□□□ -0.41
HOXB3-205ENST00000470495 MAPKAPK5-AS1Q8N8E1 139 aa12.48□□□□□ -0.41
HOXB3-205ENST00000470495 BBC3Q96PG8 261 aaPredicted RBP12.48□□□□□ -0.41
HOXB3-205ENST00000470495 CLPSL1A2RUU4 121 aa12.48□□□□□ -0.41
HOXB3-205ENST00000470495 HHLA3Q9XRX5 114 aa12.48□□□□□ -0.41
HOXB3-205ENST00000470495 FHL3Q13643 280 aa12.48□□□□□ -0.41
HOXB3-205ENST00000470495 KRTAP10-9P60411 292 aa12.47□□□□□ -0.41
HOXB3-205ENST00000470495 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
HOXB3-205ENST00000470495 PIFOQ8TCI5 191 aa12.47□□□□□ -0.41
HOXB3-205ENST00000470495 CLEC2BQ92478 149 aa12.47□□□□□ -0.41
HOXB3-205ENST00000470495 KLK9Q9UKQ9 250 aa12.47□□□□□ -0.41
HOXB3-205ENST00000470495 HOXD3P31249 432 aaPredicted RBP12.46□□□□□ -0.42
HOXB3-205ENST00000470495 DEFB131AP59861 70 aa12.46□□□□□ -0.42
HOXB3-205ENST00000470495 IGKV3D-20A0A0C4DH25 116 aa12.45□□□□□ -0.42
HOXB3-205ENST00000470495 MRPL53Q96EL3 112 aaKnown RBP12.45□□□□□ -0.42
HOXB3-205ENST00000470495 DPH3P1Q9H4G8 78 aa12.45□□□□□ -0.42
HOXB3-205ENST00000470495 SMG1Q96Q15 3661 aaKnown RBP12.45□□□□□ -0.42
HOXB3-205ENST00000470495 ZNF561-AS1K7EIQ3 104 aa12.45□□□□□ -0.42
HOXB3-205ENST00000470495 HAMPP81172 84 aa12.45□□□□□ -0.42
HOXB3-205ENST00000470495 LINC01559Q495D7 138 aa12.45□□□□□ -0.42
HOXB3-205ENST00000470495 HIST2H2BDQ6DRA6 164 aa12.45□□□□□ -0.42
HOXB3-205ENST00000470495 TIMM17AQ99595 171 aa12.45□□□□□ -0.42
HOXB3-205ENST00000470495 VPREB1P12018 145 aa12.45□□□□□ -0.42
HOXB3-205ENST00000470495 F8VRH5 84 aa12.45□□□□□ -0.42
HOXB3-205ENST00000470495 DGAT2L7PQ6IED9 249 aa12.45□□□□□ -0.42
HOXB3-205ENST00000470495 HIVEP2P31629 2446 aa12.44□□□□□ -0.42
HOXB3-205ENST00000470495 ACANP16112 2415 aa12.44□□□□□ -0.42
HOXB3-205ENST00000470495 CXCL5P42830 114 aa12.44□□□□□ -0.42
HOXB3-205ENST00000470495 SMCPP49901 116 aaPredicted RBP12.44□□□□□ -0.42
HOXB3-205ENST00000470495 C9orf47Q6ZRZ4 202 aa12.44□□□□□ -0.42
HOXB3-205ENST00000470495 IGHV3-73A0A0B4J1V6 119 aa12.44□□□□□ -0.42
HOXB3-205ENST00000470495 PAPPA-AS1Q5QFB9 102 aa12.44□□□□□ -0.42
HOXB3-205ENST00000470495 IMUPQ9GZP8 106 aa12.44□□□□□ -0.42
HOXB3-205ENST00000470495 RPL18AQ02543 176 aaKnown RBP12.43□□□□□ -0.42
HOXB3-205ENST00000470495 IGHV4OR15-8A0A075B7B6 117 aa12.43□□□□□ -0.42
HOXB3-205ENST00000470495 A0A087WW49 117 aa12.43□□□□□ -0.42
HOXB3-205ENST00000470495 CRIP2P52943 208 aaPredicted RBP12.43□□□□□ -0.42
HOXB3-205ENST00000470495 SLURP1P55000 103 aa12.43□□□□□ -0.42
HOXB3-205ENST00000470495 SNURFQ9Y675 71 aa12.43□□□□□ -0.42
HOXB3-205ENST00000470495 C2CD3Q4AC94 2353 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms