RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.21
SEMA4D-215ENST00000469653 Q6ZSV7 163 aa7.52□□□□□ -1.21
SEMA4D-215ENST00000469653 LINC00482Q8N8I6 264 aa7.52□□□□□ -1.21
SEMA4D-215ENST00000469653 NXT2Q9NPJ8 142 aaKnown RBP7.52□□□□□ -1.21
SEMA4D-215ENST00000469653 IGHV7-81A0A0B4J1V7 117 aa7.52□□□□□ -1.21
SEMA4D-215ENST00000469653 F6UB75 175 aa7.52□□□□□ -1.21
SEMA4D-215ENST00000469653 HLA-DRB4P13762 266 aa7.52□□□□□ -1.21
SEMA4D-215ENST00000469653 Q6ZUT4 128 aa7.52□□□□□ -1.21
SEMA4D-215ENST00000469653 PRO0461Q9UI25 63 aa7.52□□□□□ -1.21
SEMA4D-215ENST00000469653 HLA-DRB4X5D2U9 266 aa7.52□□□□□ -1.21
SEMA4D-215ENST00000469653 IGHG2P01859 326 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 HERVK_113P63121 156 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 FAM240AA0A1B0GVK7 77 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 ADARB2-AS1A8MUL3 147 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 INAFM2P0DMQ5 153 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 PSMG4Q5JS54 123 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 C14orf178Q8N769 122 aaPredicted RBP7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 ATRQ13535 2644 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 IGLV11-55A0A075B6I3 123 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 Q8N2B8 174 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 Q8N8P6 123 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 C11orf21Q9P2W6 132 aa7.51□□□□□ -1.21
SEMA4D-215ENST00000469653 RBMY1CP0DJD4 496 aa7.5□□□□□ -1.21
SEMA4D-215ENST00000469653 Q1RN00 199 aa7.5□□□□□ -1.21
SEMA4D-215ENST00000469653 MYOZ3Q8TDC0 251 aa7.5□□□□□ -1.21
SEMA4D-215ENST00000469653 NDUFA7O95182 113 aa7.5□□□□□ -1.21
SEMA4D-215ENST00000469653 TRBV7-3A0A075B6L6 115 aa7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 IGKV3D-20A0A0C4DH25 116 aa7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 TRPT1Q86TN4 253 aaKnown RBP7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 NRACQ8N912 160 aa7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 C16orf95Q9H693 158 aa7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 FBN1P35555 2871 aaKnown RBP7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 RRN3P1Q2M238 152 aa7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 LINC01006Q8NI28 216 aa7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 KRTAP24-1Q3LI83 254 aa7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 GAGE13Q4V321 117 aa7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 ZNRF2Q8NHG8 242 aa7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 RPL39LQ96EH5 51 aaKnown RBP7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 UBE2E2Q96LR5 201 aa7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 ZNF256Q9Y2P7 627 aaPredicted RBP7.49□□□□□ -1.21
SEMA4D-215ENST00000469653 TTC9CQ8N5M4 171 aa7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 LINC01549A6NIU2 74 aa7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 H7C1H1 209 aa7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 CTSGP08311 255 aa7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 RNASE13Q5GAN3 156 aaKnown RBP7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 TMEM170BQ5T4T1 132 aa7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 MORN3Q6PF18 240 aaPredicted RBP7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 ZFP2Q6ZN57 461 aa7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 IGHV3-73A0A0B4J1V6 119 aa7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 K7EMT4 169 aa7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 PRSS2P07478 247 aa7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 APOC4P55056 127 aa7.48□□□□□ -1.21
SEMA4D-215ENST00000469653 TRAV41A0A0B4J266 112 aa7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 CRYGDP07320 174 aa7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 PFN2P35080 140 aa7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 LAGE3Q14657 143 aa7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 CLPSL1A2RUU4 121 aa7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 SMCPP49901 116 aaPredicted RBP7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 SCGB3A1Q96QR1 104 aa7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 IGHV7-4-1A0A0J9YVY3 117 aa7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 SNCGO76070 127 aa7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 ANKRD29Q8N6D5 301 aa7.47□□□□□ -1.21
SEMA4D-215ENST00000469653 CRIP2P52943 208 aaPredicted RBP7.46□□□□□ -1.21
SEMA4D-215ENST00000469653 OPRPNQ99935 248 aaPredicted RBP7.46□□□□□ -1.21
SEMA4D-215ENST00000469653 ZNF815PA8K554 130 aa7.46□□□□□ -1.22
SEMA4D-215ENST00000469653 C10orf99Q6UWK7 81 aa7.46□□□□□ -1.22
SEMA4D-215ENST00000469653 RNASE4P34096 147 aaKnown RBP7.45□□□□□ -1.22
SEMA4D-215ENST00000469653 C19orf54Q5BKX5 351 aa7.45□□□□□ -1.22
SEMA4D-215ENST00000469653 ZNF580Q9UK33 172 aa7.45□□□□□ -1.22
SEMA4D-215ENST00000469653 AGPAT4-IT1Q9H0P7 198 aa7.45□□□□□ -1.22
SEMA4D-215ENST00000469653 TENM1Q9UKZ4 2725 aa7.45□□□□□ -1.22
SEMA4D-215ENST00000469653 MYMXA0A1B0GTQ4 84 aa7.45□□□□□ -1.22
SEMA4D-215ENST00000469653 PLNP26678 52 aa7.45□□□□□ -1.22
SEMA4D-215ENST00000469653 PROK1P58294 105 aa7.45□□□□□ -1.22
SEMA4D-215ENST00000469653 CFHR3Q02985 330 aa7.45□□□□□ -1.22
SEMA4D-215ENST00000469653 NFE4Q86UQ8 179 aa7.45□□□□□ -1.22
SEMA4D-215ENST00000469653 F8VRH5 84 aa7.44□□□□□ -1.22
SEMA4D-215ENST00000469653 BUB3O43684 328 aa7.44□□□□□ -1.22
SEMA4D-215ENST00000469653 TRBV12-3P01733 135 aa7.44□□□□□ -1.22
SEMA4D-215ENST00000469653 LGALS1P09382 135 aaKnown RBP7.44□□□□□ -1.22
SEMA4D-215ENST00000469653 FOXI1Q12951 378 aa7.44□□□□□ -1.22
SEMA4D-215ENST00000469653 PMVKQ15126 192 aa7.44□□□□□ -1.22
SEMA4D-215ENST00000469653 NBEAL2Q6ZNJ1 2754 aa7.44□□□□□ -1.22
SEMA4D-215ENST00000469653 GNRH2O43555 120 aa7.44□□□□□ -1.22
SEMA4D-215ENST00000469653 CFAP126Q5VTH2 177 aa7.44□□□□□ -1.22
SEMA4D-215ENST00000469653 COL6A5A8TX70 2615 aa7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 RPL39P62891 51 aaKnown RBP7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 PLEKHB2Q96CS7 222 aa7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 PHLDA3Q9Y5J5 127 aa7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 LINC01619G3V211 115 aa7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 J3QQQ9 107 aa7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 IGLV1-40P01703 118 aa7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 PRM2P04554 102 aa7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 GAGE2AQ6NT46 116 aa7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 TRAV12-1A0A0B4J245 112 aa7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 METTL26Q96S19 204 aa7.43□□□□□ -1.22
SEMA4D-215ENST00000469653 TRAV2A0A0B4J234 112 aa7.42□□□□□ -1.22
SEMA4D-215ENST00000469653 TRAV8-2A0A0B4J237 113 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms