RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 C1orf134Q5TEV5 83 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 Q6ZQT7 251 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 LINC00336Q6ZUF6 198 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 ATP6V0E2Q8NHE4 81 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 LYPD6BQ8NI32 183 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 CHCHD5Q9BSY4 110 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 NAT8Q9UHE5 227 aa4.29□□□□□ -1.72
PTCD3-208ENST00000469585 DNAH3Q8TD57 4116 aa4.28□□□□□ -1.72
PTCD3-208ENST00000469585 IGLV2-18A0A075B6J9 118 aa4.28□□□□□ -1.72
PTCD3-208ENST00000469585 A0A096LPF7 62 aa4.28□□□□□ -1.72
PTCD3-208ENST00000469585 TRBV10-1A0A0K0K1A3 114 aa4.28□□□□□ -1.72
PTCD3-208ENST00000469585 M0R2N4 97 aa4.28□□□□□ -1.72
PTCD3-208ENST00000469585 PPP1R2P9O14990 202 aa4.28□□□□□ -1.72
PTCD3-208ENST00000469585 GATA1P15976 413 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-208ENST00000469585 SLC25A29Q8N8R3 303 aa4.28□□□□□ -1.72
PTCD3-208ENST00000469585 SFRP2Q96HF1 295 aa4.28□□□□□ -1.72
PTCD3-208ENST00000469585 MRPS16Q9Y3D3 137 aaKnown RBP4.28□□□□□ -1.72
PTCD3-208ENST00000469585 A0A087WX48 190 aa4.27□□□□□ -1.73
PTCD3-208ENST00000469585 PSCAO43653 123 aa4.27□□□□□ -1.73
PTCD3-208ENST00000469585 CRIP1P50238 77 aa4.27□□□□□ -1.73
PTCD3-208ENST00000469585 ELOBQ15370 118 aa4.27□□□□□ -1.73
PTCD3-208ENST00000469585 FAM231DQ6ZW35 169 aa4.27□□□□□ -1.73
PTCD3-208ENST00000469585 RMI2Q96E14 147 aa4.27□□□□□ -1.73
PTCD3-208ENST00000469585 UPK3BQ9BT76 320 aa4.27□□□□□ -1.73
PTCD3-208ENST00000469585 OCR1Q9BZK8 76 aa4.27□□□□□ -1.73
PTCD3-208ENST00000469585 GTSF1LQ9H1H1 148 aa4.27□□□□□ -1.73
PTCD3-208ENST00000469585 DPH3P1Q9H4G8 78 aa4.27□□□□□ -1.73
PTCD3-208ENST00000469585 TRBV7-3A0A075B6L6 115 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 NBDYA0A0U1RRE5 68 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 A0A1B0GW15 77 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 FAM231BA6NCW3 169 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 F8W036 122 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 UBE2L6O14933 153 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 SNAI2O43623 268 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 PPP1R17O96001 155 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 MT-ND4LP03901 98 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 SMAGPQ0VAQ4 97 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 NDUFA5Q16718 116 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 UQCC3Q6UW78 93 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 LYZL1Q6UWQ5 148 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 DAZ4Q86SG3 579 aaKnown RBP4.26□□□□□ -1.73
PTCD3-208ENST00000469585 LINC01551Q86U37 167 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 C14orf178Q8N769 122 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-208ENST00000469585 OR10AG1Q8NH19 301 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 TSKUQ8WUA8 353 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 RNASE7Q9H1E1 156 aaKnown RBP4.26□□□□□ -1.73
PTCD3-208ENST00000469585 DAZ3Q9NR90 486 aaKnown RBP4.26□□□□□ -1.73
PTCD3-208ENST00000469585 OSTCQ9NRP0 149 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 NAT8BQ9UHF3 227 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 LINC00588Q9Y4M8 146 aa4.26□□□□□ -1.73
PTCD3-208ENST00000469585 MUC21A0A0G2JKD1 596 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 MUC21A0A140T8X8 626 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 A0A1B0GUT8 65 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 C19orf71A6NCJ1 209 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 TMEM262E9PQX1 116 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 CRPP02741 224 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 CRYGDP07320 174 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 SRP19P09132 144 aaKnown RBP4.25□□□□□ -1.73
PTCD3-208ENST00000469585 GZMBP10144 247 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 NTF3P20783 257 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 ESRGQ1W209 222 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 CLLU1Q5K131 121 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 LELP1Q5T871 98 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 LYPD5Q6UWN5 251 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 C6orf223Q8N319 242 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 ZNRF2Q8NHG8 242 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 VSIG2Q96IQ7 327 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 PGLYRP4Q96LB8 373 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 DNAJC30Q96LL9 226 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 JPT2Q9H910 190 aa4.25□□□□□ -1.73
PTCD3-208ENST00000469585 MUC4Q99102 2169 aa4.24□□□□□ -1.73
PTCD3-208ENST00000469585 TRBV20OR9-2A0A075B6H5 130 aa4.24□□□□□ -1.73
PTCD3-208ENST00000469585 TRBV25-1A0A075B6N4 114 aa4.24□□□□□ -1.73
PTCD3-208ENST00000469585 HIGD1CA8MV81 97 aa4.24□□□□□ -1.73
PTCD3-208ENST00000469585 IGLV2-8P01709 118 aa4.24□□□□□ -1.73
PTCD3-208ENST00000469585 S100PP25815 95 aa4.24□□□□□ -1.73
PTCD3-208ENST00000469585 CTRLP40313 264 aa4.24□□□□□ -1.73
PTCD3-208ENST00000469585 RASL11AQ6T310 242 aa4.24□□□□□ -1.73
PTCD3-208ENST00000469585 FRZBQ92765 325 aa4.24□□□□□ -1.73
PTCD3-208ENST00000469585 TRAV8-3A0A0A6YYJ7 113 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 K7EN84 100 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 TCAPO15273 167 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 IGLC6P0CF74 106 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 HERV-K104P63124 156 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 Q0VG73 95 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 COTL1Q14019 142 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 AMMECR1LQ6DCA0 310 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 ISOC2Q96AB3 205 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 CHCHD7Q9BUK0 85 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 NIT2Q9NQR4 276 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 NACAE9PAV3 2078 aa4.23□□□□□ -1.73
PTCD3-208ENST00000469585 IGHV1-24A0A0C4DH33 117 aa4.22□□□□□ -1.73
PTCD3-208ENST00000469585 LOC100131303A0A0U1RQF7 123 aa4.22□□□□□ -1.73
PTCD3-208ENST00000469585 PMCHP20382 165 aa4.22□□□□□ -1.73
PTCD3-208ENST00000469585 FCER1GP30273 86 aa4.22□□□□□ -1.73
PTCD3-208ENST00000469585 RPL23P62829 140 aaKnown RBP4.22□□□□□ -1.73
PTCD3-208ENST00000469585 HBBP68871 147 aa4.22□□□□□ -1.73
PTCD3-208ENST00000469585 LINC01556Q5JQF7 62 aa4.22□□□□□ -1.73
PTCD3-208ENST00000469585 MRAP2Q96G30 205 aa4.22□□□□□ -1.73
PTCD3-208ENST00000469585 BTF3L4Q96K17 158 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms