RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 A8MZ25 164 aa13.05□□□□□ -0.32
MCF2L-221ENST00000469415 HERVK_113P61574 105 aa13.05□□□□□ -0.32
MCF2L-221ENST00000469415 WFDC10AQ9H1F0 79 aa13.05□□□□□ -0.32
MCF2L-221ENST00000469415 TMEM89A2RUT3 159 aa13.04□□□□□ -0.32
MCF2L-221ENST00000469415 PEMTQ9UBM1 199 aa13.04□□□□□ -0.32
MCF2L-221ENST00000469415 I3L3M4 83 aa13.04□□□□□ -0.32
MCF2L-221ENST00000469415 DNAJC9-AS1A6NH13 148 aa13.03□□□□□ -0.32
MCF2L-221ENST00000469415 NPC2P61916 151 aa13.03□□□□□ -0.32
MCF2L-221ENST00000469415 ESM1Q9NQ30 184 aa13.03□□□□□ -0.32
MCF2L-221ENST00000469415 LGALS3P17931 250 aaKnown RBP13.02□□□□□ -0.32
MCF2L-221ENST00000469415 DEFB114Q30KQ6 69 aa13.02□□□□□ -0.32
MCF2L-221ENST00000469415 C20orf203Q8NBC4 194 aa13.02□□□□□ -0.32
MCF2L-221ENST00000469415 RAX2Q96IS3 184 aa13.02□□□□□ -0.32
MCF2L-221ENST00000469415 TRAV8-3A0A0A6YYJ7 113 aa13.02□□□□□ -0.33
MCF2L-221ENST00000469415 ETDBQ3ZM63 59 aa13.02□□□□□ -0.33
MCF2L-221ENST00000469415 KRTAP1-3Q8IUG1 177 aa13.02□□□□□ -0.33
MCF2L-221ENST00000469415 POM121L12Q8N7R1 296 aa13.02□□□□□ -0.33
MCF2L-221ENST00000469415 YAE1D1Q9NRH1 226 aa13.02□□□□□ -0.33
MCF2L-221ENST00000469415 J3QQQ9 107 aa13.01□□□□□ -0.33
MCF2L-221ENST00000469415 CKS1BP61024 79 aa13.01□□□□□ -0.33
MCF2L-221ENST00000469415 CITED2Q99967 270 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-221ENST00000469415 TRAV2A0A0B4J234 112 aa13.01□□□□□ -0.33
MCF2L-221ENST00000469415 ODF3Q96PU9 254 aa13.01□□□□□ -0.33
MCF2L-221ENST00000469415 INSL3P51460 131 aa13□□□□□ -0.33
MCF2L-221ENST00000469415 TRGV1A0A0A0MS02 117 aa13□□□□□ -0.33
MCF2L-221ENST00000469415 TMEM141Q96I45 108 aa13□□□□□ -0.33
MCF2L-221ENST00000469415 TIMM17AQ99595 171 aa13□□□□□ -0.33
MCF2L-221ENST00000469415 C4orf3Q8WVX3 66 aa12.99□□□□□ -0.33
MCF2L-221ENST00000469415 IGLV4-3A0A075B6K6 122 aa12.99□□□□□ -0.33
MCF2L-221ENST00000469415 A0A0J9YY99 117 aa12.99□□□□□ -0.33
MCF2L-221ENST00000469415 TRBV6-5A0A0K0K1A5 114 aa12.99□□□□□ -0.33
MCF2L-221ENST00000469415 STHQ8IWL8 128 aa12.99□□□□□ -0.33
MCF2L-221ENST00000469415 OR5A1Q8NGJ0 315 aa12.99□□□□□ -0.33
MCF2L-221ENST00000469415 ZNF418Q8TF45 676 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-221ENST00000469415 PLA2G2AP14555 144 aa12.99□□□□□ -0.33
MCF2L-221ENST00000469415 RPL35AP18077 110 aaKnown RBP12.99□□□□□ -0.33
MCF2L-221ENST00000469415 RRN3P1Q2M238 152 aa12.99□□□□□ -0.33
MCF2L-221ENST00000469415 ODF3L2Q3SX64 289 aa12.99□□□□□ -0.33
MCF2L-221ENST00000469415 PRSS2P07478 247 aa12.98□□□□□ -0.33
MCF2L-221ENST00000469415 M0R2P5 195 aa12.98□□□□□ -0.33
MCF2L-221ENST00000469415 PSMB2P49721 201 aa12.98□□□□□ -0.33
MCF2L-221ENST00000469415 SIGMAR1Q99720 223 aa12.98□□□□□ -0.33
MCF2L-221ENST00000469415 SMR3AQ99954 134 aa12.98□□□□□ -0.33
MCF2L-221ENST00000469415 A0A1B0GV72 72 aa12.97□□□□□ -0.33
MCF2L-221ENST00000469415 NSUN5P1Q3KNT7 163 aa12.97□□□□□ -0.33
MCF2L-221ENST00000469415 SS18L2Q9UHA2 77 aa12.97□□□□□ -0.33
MCF2L-221ENST00000469415 A0A0U1RRA0 63 aa12.97□□□□□ -0.33
MCF2L-221ENST00000469415 CCL24O00175 119 aa12.97□□□□□ -0.33
MCF2L-221ENST00000469415 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
MCF2L-221ENST00000469415 ZNF415Q09FC8 603 aa12.97□□□□□ -0.33
MCF2L-221ENST00000469415 ZNF22P17026 224 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-221ENST00000469415 TAL2Q16559 108 aa12.96□□□□□ -0.34
MCF2L-221ENST00000469415 RNF152Q8N8N0 203 aa12.95□□□□□ -0.34
MCF2L-221ENST00000469415 INSP01308 110 aa12.95□□□□□ -0.34
MCF2L-221ENST00000469415 SPINK8P0C7L1 97 aa12.95□□□□□ -0.34
MCF2L-221ENST00000469415 VWFP04275 2813 aa12.95□□□□□ -0.34
MCF2L-221ENST00000469415 PAPPA-AS1Q5QFB9 102 aa12.94□□□□□ -0.34
MCF2L-221ENST00000469415 LINC00467Q9BRT7 94 aa12.94□□□□□ -0.34
MCF2L-221ENST00000469415 NDUFA7O95182 113 aa12.94□□□□□ -0.34
MCF2L-221ENST00000469415 SCGB1C2P0DMR2 95 aa12.94□□□□□ -0.34
MCF2L-221ENST00000469415 GAGE12HA6NDE8 117 aa12.94□□□□□ -0.34
MCF2L-221ENST00000469415 RHODO00212 210 aa12.94□□□□□ -0.34
MCF2L-221ENST00000469415 RPL32P62910 135 aaKnown RBP12.94□□□□□ -0.34
MCF2L-221ENST00000469415 RHOHQ15669 191 aa12.94□□□□□ -0.34
MCF2L-221ENST00000469415 PTH2Q96A98 100 aa12.94□□□□□ -0.34
MCF2L-221ENST00000469415 PDZD2O15018 2839 aa12.93□□□□□ -0.34
MCF2L-221ENST00000469415 A0A1B0GWB2 263 aa12.93□□□□□ -0.34
MCF2L-221ENST00000469415 DGAT2L7PQ6IED9 249 aa12.93□□□□□ -0.34
MCF2L-221ENST00000469415 Q6ZTI0 123 aa12.93□□□□□ -0.34
MCF2L-221ENST00000469415 Q6ZUT4 128 aa12.93□□□□□ -0.34
MCF2L-221ENST00000469415 ZNF625Q96I27 306 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-221ENST00000469415 GAGE13Q4V321 117 aa12.93□□□□□ -0.34
MCF2L-221ENST00000469415 A8MWV9 139 aa12.92□□□□□ -0.34
MCF2L-221ENST00000469415 TSPAN13O95857 204 aa12.92□□□□□ -0.34
MCF2L-221ENST00000469415 DAND5Q8N907 189 aa12.92□□□□□ -0.34
MCF2L-221ENST00000469415 ATRQ13535 2644 aa12.92□□□□□ -0.34
MCF2L-221ENST00000469415 IGKV3OR2-268A0A0C4DH90 116 aa12.91□□□□□ -0.34
MCF2L-221ENST00000469415 A4D1N5 150 aa12.91□□□□□ -0.34
MCF2L-221ENST00000469415 A6NJY4 79 aa12.91□□□□□ -0.34
MCF2L-221ENST00000469415 TMEM223A0PJW6 202 aa12.91□□□□□ -0.34
MCF2L-221ENST00000469415 Q8N2B8 174 aa12.91□□□□□ -0.34
MCF2L-221ENST00000469415 C11orf72Q8NBR9 251 aa12.91□□□□□ -0.34
MCF2L-221ENST00000469415 NOP10Q9NPE3 64 aaKnown RBP12.91□□□□□ -0.34
MCF2L-221ENST00000469415 C1orf158Q8N1D5 194 aa12.91□□□□□ -0.34
MCF2L-221ENST00000469415 CFC1BP0CG36 223 aa12.9□□□□□ -0.34
MCF2L-221ENST00000469415 CFC1P0CG37 223 aa12.9□□□□□ -0.34
MCF2L-221ENST00000469415 Q1RN00 199 aa12.9□□□□□ -0.34
MCF2L-221ENST00000469415 GEMIN7Q9H840 131 aaKnown RBP12.9□□□□□ -0.34
MCF2L-221ENST00000469415 GAGE12JA6NER3 117 aa12.9□□□□□ -0.34
MCF2L-221ENST00000469415 IGHV3-30-3P0DP02 117 aa12.9□□□□□ -0.34
MCF2L-221ENST00000469415 GAGE4Q13068 117 aa12.9□□□□□ -0.34
MCF2L-221ENST00000469415 GAGE5Q13069 117 aa12.9□□□□□ -0.34
MCF2L-221ENST00000469415 MUSTN1Q8IVN3 82 aa12.9□□□□□ -0.34
MCF2L-221ENST00000469415 C10orf126Q8N4M7 172 aa12.9□□□□□ -0.34
MCF2L-221ENST00000469415 IGHV3-30P01768 117 aa12.89□□□□□ -0.35
MCF2L-221ENST00000469415 IGHV3-30-5P0DP03 117 aa12.89□□□□□ -0.35
MCF2L-221ENST00000469415 NDUFA11Q86Y39 141 aa12.89□□□□□ -0.35
MCF2L-221ENST00000469415 TIMM21Q9BVV7 248 aa12.89□□□□□ -0.35
MCF2L-221ENST00000469415 LINC01006Q8NI28 216 aa12.89□□□□□ -0.35
MCF2L-221ENST00000469415 FAM104AQ969W3 186 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms