RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 HIST1H1AQ02539 215 aaPredicted RBP1.7□□□□□ -2.14
LSM5-209ENST00000468872 TMEM14EPQ6UXP3 125 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 IFT20Q8IY31 132 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 NAT14Q8WUY8 206 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 DIRC1Q969H9 104 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 RETNLBQ9BQ08 111 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 NAA38Q9BRA0 125 aaKnown RBP1.7□□□□□ -2.14
LSM5-209ENST00000468872 LXNQ9BS40 222 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 TPT1P8Q9HAU6 139 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 NHP2Q9NX24 153 aaKnown RBP1.7□□□□□ -2.14
LSM5-209ENST00000468872 FREM3P0C091 2139 aa1.7□□□□□ -2.14
LSM5-209ENST00000468872 IGKV2D-26A0A0A0MRZ7 120 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 TRAV13-1A0A0B4J241 112 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 TRBV27A0A0K0K1C4 114 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 SPTY2D1-AS1A0A0U1RR47 76 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 DPM2O94777 84 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 ASAH2BP0C7U1 165 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 UBBP0CG47 229 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 MGST1P10620 155 aaKnown RBP1.69□□□□□ -2.14
LSM5-209ENST00000468872 CMPK1P30085 196 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 SSR2P43308 183 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 MYL5Q02045 173 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 ELOBQ15370 118 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 CCDC58Q4VC31 144 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 GLYATL3Q5SZD4 288 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 Q5VSD8 79 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 TCTE3Q8IZS6 198 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 Q8N814 137 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 ZNF714Q96N38 554 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 LINC00467Q9BRT7 94 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 SLC50A1Q9BRV3 221 aa1.69□□□□□ -2.14
LSM5-209ENST00000468872 EFCAB10A6NFE3 127 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 H3BMG7 143 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 KRTAP2-3P0C7H8 128 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 FOXA3P55318 350 aaPredicted RBP1.68□□□□□ -2.14
LSM5-209ENST00000468872 KLRD1Q13241 179 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 RNASE10Q5GAN6 216 aaKnown RBP1.68□□□□□ -2.14
LSM5-209ENST00000468872 TMEM244Q5VVB8 128 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 C4orf22Q6V702 233 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 MORN4Q8NDC4 146 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 OR51A4Q8NGJ6 313 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 CCL4L1Q8NHW4 92 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 BRK1Q8WUW1 75 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 POP5Q969H6 163 aaKnown RBP1.68□□□□□ -2.14
LSM5-209ENST00000468872 PFDN5Q99471 154 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 KRTAP2-4Q9BYR9 128 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 COPZ2Q9P299 210 aa1.68□□□□□ -2.14
LSM5-209ENST00000468872 DSPPQ9NZW4 1301 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 DEFB108AA8MXU0 73 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 F8W036 122 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 K7EP13 123 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 IFNA4P05014 189 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 BAALC-AS2P0C853 105 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 COX4I1P13073 169 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 CRYGSP22914 178 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 KDELR1P24390 212 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 ZNF93P35789 620 aaPredicted RBP1.67□□□□□ -2.14
LSM5-209ENST00000468872 NDUFA6P56556 154 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 SPANXN5Q5MJ07 72 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 C1orf134Q5TEV5 83 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 FAM216BQ8N7L0 139 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 LINC00301Q8NCQ3 95 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 OR5A2Q8NGI9 324 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 OR5D16Q8NGK9 328 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 OR5H6Q8NGV6 325 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 OR4K15Q8NH41 348 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 CHCHD1Q96BP2 118 aaKnown RBP1.67□□□□□ -2.14
LSM5-209ENST00000468872 OR5AC2Q9NZP5 309 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 U3KQ87 197 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 LPAP08519 4548 aa1.67□□□□□ -2.14
LSM5-209ENST00000468872 A0A096LPI6 279 aa1.66□□□□□ -2.14
LSM5-209ENST00000468872 TRAV17A0A0B4J275 112 aa1.66□□□□□ -2.14
LSM5-209ENST00000468872 IGKV2-29A2NJV5 120 aaPredicted RBP1.66□□□□□ -2.14
LSM5-209ENST00000468872 ZNF727A8MUV8 499 aa1.66□□□□□ -2.14
LSM5-209ENST00000468872 CDK5R1Q15078 307 aa1.66□□□□□ -2.14
LSM5-209ENST00000468872 Q6ZSA8 131 aa1.66□□□□□ -2.14
LSM5-209ENST00000468872 PRELID3AQ96N28 172 aa1.66□□□□□ -2.14
LSM5-209ENST00000468872 C14orf132Q9NPU4 83 aa1.66□□□□□ -2.14
LSM5-209ENST00000468872 TRAV12-1A0A0B4J245 112 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 C2orf70A6NJV1 201 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 UBL3O95164 117 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 MT-ND6P03923 174 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 SLC25A5P05141 298 aaKnown RBP1.65□□□□□ -2.15
LSM5-209ENST00000468872 PAEPP09466 180 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 EVI2AP22794 236 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 DNAJB13P59910 316 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 DIAPH2-AS1Q14236 149 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 TSC22D3Q99576 134 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 SMIM3Q9BZL3 60 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
LSM5-209ENST00000468872 ANAPC1Q9H1A4 1944 aa1.64□□□□□ -2.15
LSM5-209ENST00000468872 A0A087WSZ3 146 aa1.64□□□□□ -2.15
LSM5-209ENST00000468872 TCRAP04437 139 aa1.64□□□□□ -2.15
LSM5-209ENST00000468872 TSPAN19P0C672 248 aa1.64□□□□□ -2.15
LSM5-209ENST00000468872 RAB5CP51148 216 aa1.64□□□□□ -2.15
LSM5-209ENST00000468872 MAXP61244 160 aa1.64□□□□□ -2.15
LSM5-209ENST00000468872 QRFPP83859 136 aa1.64□□□□□ -2.15
LSM5-209ENST00000468872 PDE6HQ13956 83 aa1.64□□□□□ -2.15
LSM5-209ENST00000468872 LINC00311Q8N616 119 aa1.64□□□□□ -2.15
LSM5-209ENST00000468872 OR4S1Q8NGB4 309 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms