RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 GAGE13Q4V321 117 aa13.43□□□□□ -0.26
SMC4-209ENST00000468653 PRADC1Q9BSG0 188 aa13.43□□□□□ -0.26
SMC4-209ENST00000468653 PRO1933Q9H354 126 aa13.43□□□□□ -0.26
SMC4-209ENST00000468653 RETNQ9HD89 108 aa13.43□□□□□ -0.26
SMC4-209ENST00000468653 SPART-AS1P0CW21 52 aa13.43□□□□□ -0.26
SMC4-209ENST00000468653 DAD1P61803 113 aa13.43□□□□□ -0.26
SMC4-209ENST00000468653 PKIAP61925 76 aa13.43□□□□□ -0.26
SMC4-209ENST00000468653 TSTD3H0UI37 97 aa13.42□□□□□ -0.26
SMC4-209ENST00000468653 C20orf203Q8NBC4 194 aa13.42□□□□□ -0.26
SMC4-209ENST00000468653 HHLA3Q9XRX5 114 aa13.42□□□□□ -0.26
SMC4-209ENST00000468653 TRAV9-2A0A087WT02 112 aa13.41□□□□□ -0.26
SMC4-209ENST00000468653 DAZ4Q86SG3 579 aaKnown RBP13.41□□□□□ -0.26
SMC4-209ENST00000468653 DAZ3Q9NR90 486 aaKnown RBP13.41□□□□□ -0.26
SMC4-209ENST00000468653 CELA1Q9UNI1 258 aa13.41□□□□□ -0.26
SMC4-209ENST00000468653 UBE2D3P61077 147 aa13.4□□□□□ -0.26
SMC4-209ENST00000468653 UBE2D2P62837 147 aa13.4□□□□□ -0.26
SMC4-209ENST00000468653 LOC100131303A0A0U1RQF7 123 aa13.4□□□□□ -0.26
SMC4-209ENST00000468653 IGIPA6NJ69 53 aa13.4□□□□□ -0.26
SMC4-209ENST00000468653 MAJINQ3KP22 176 aa13.4□□□□□ -0.26
SMC4-209ENST00000468653 SPATA45Q537H7 98 aa13.4□□□□□ -0.26
SMC4-209ENST00000468653 LURAP1LQ8IV03 231 aa13.4□□□□□ -0.26
SMC4-209ENST00000468653 TMEM141Q96I45 108 aa13.4□□□□□ -0.26
SMC4-209ENST00000468653 ZMAT4Q9H898 229 aa13.4□□□□□ -0.26
SMC4-209ENST00000468653 ODF1Q14990 250 aa13.39□□□□□ -0.27
SMC4-209ENST00000468653 KPRPQ5T749 579 aaPredicted RBP13.39□□□□□ -0.27
SMC4-209ENST00000468653 TIMM17AQ99595 171 aa13.39□□□□□ -0.27
SMC4-209ENST00000468653 HSBP1L1C9JCN9 74 aa13.38□□□□□ -0.27
SMC4-209ENST00000468653 BAALCQ8WXS3 180 aa13.38□□□□□ -0.27
SMC4-209ENST00000468653 NOTCH1P46531 2555 aa13.38□□□□□ -0.27
SMC4-209ENST00000468653 TRAV12-1A0A0B4J245 112 aa13.37□□□□□ -0.27
SMC4-209ENST00000468653 TEX48A0A1B0GUV7 120 aa13.37□□□□□ -0.27
SMC4-209ENST00000468653 K7EIL1 84 aa13.37□□□□□ -0.27
SMC4-209ENST00000468653 DEFB121Q5J5C9 76 aa13.37□□□□□ -0.27
SMC4-209ENST00000468653 CHCHD7Q9BUK0 85 aa13.37□□□□□ -0.27
SMC4-209ENST00000468653 PRO0255Q9UI72 69 aa13.37□□□□□ -0.27
SMC4-209ENST00000468653 A0A087WX48 190 aa13.37□□□□□ -0.27
SMC4-209ENST00000468653 hDV102S1A0JD36 115 aa13.37□□□□□ -0.27
SMC4-209ENST00000468653 ATP5G1P05496 136 aa13.37□□□□□ -0.27
SMC4-209ENST00000468653 CRYBA4P53673 196 aa13.37□□□□□ -0.27
SMC4-209ENST00000468653 SBSPONQ8IVN8 264 aa13.35□□□□□ -0.27
SMC4-209ENST00000468653 MRPL35Q9NZE8 188 aaKnown RBP13.35□□□□□ -0.27
SMC4-209ENST00000468653 CHTOPQ9Y3Y2 248 aaKnown RBP13.35□□□□□ -0.27
SMC4-209ENST00000468653 DNAH3Q8TD57 4116 aa13.34□□□□□ -0.27
SMC4-209ENST00000468653 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.34□□□□□ -0.27
SMC4-209ENST00000468653 IGKV2-29A2NJV5 120 aaPredicted RBP13.34□□□□□ -0.27
SMC4-209ENST00000468653 PRSS29PA6NIE9 313 aa13.34□□□□□ -0.27
SMC4-209ENST00000468653 PAX4O43316 350 aa13.34□□□□□ -0.27
SMC4-209ENST00000468653 DPM2O94777 84 aa13.34□□□□□ -0.27
SMC4-209ENST00000468653 GYPEP15421 78 aa13.34□□□□□ -0.27
SMC4-209ENST00000468653 MGAM2Q2M2H8 2515 aa13.33□□□□□ -0.27
SMC4-209ENST00000468653 IGKCP01834 107 aa13.33□□□□□ -0.28
SMC4-209ENST00000468653 PMVKQ15126 192 aa13.33□□□□□ -0.28
SMC4-209ENST00000468653 PYGO1Q9Y3Y4 419 aa13.33□□□□□ -0.28
SMC4-209ENST00000468653 F5H768 121 aa13.32□□□□□ -0.28
SMC4-209ENST00000468653 NTM-AS1Q6ZSK4 140 aa13.32□□□□□ -0.28
SMC4-209ENST00000468653 OPRPNQ99935 248 aaPredicted RBP13.32□□□□□ -0.28
SMC4-209ENST00000468653 GTSF1LQ9H1H1 148 aa13.32□□□□□ -0.28
SMC4-209ENST00000468653 C11orf68Q9H3H3 251 aaKnown RBP13.32□□□□□ -0.28
SMC4-209ENST00000468653 F8VRH5 84 aa13.32□□□□□ -0.28
SMC4-209ENST00000468653 LINC00694P0DN24 101 aa13.32□□□□□ -0.28
SMC4-209ENST00000468653 HTN3P15516 51 aa13.32□□□□□ -0.28
SMC4-209ENST00000468653 MRAPQ8TCY5 172 aa13.32□□□□□ -0.28
SMC4-209ENST00000468653 PLNP26678 52 aa13.31□□□□□ -0.28
SMC4-209ENST00000468653 PAPPA-AS1Q5QFB9 102 aa13.31□□□□□ -0.28
SMC4-209ENST00000468653 ZC2HC1BQ5TFG8 222 aa13.31□□□□□ -0.28
SMC4-209ENST00000468653 CST9LQ9H4G1 147 aa13.31□□□□□ -0.28
SMC4-209ENST00000468653 SPANXA1Q9NS26 97 aa13.31□□□□□ -0.28
SMC4-209ENST00000468653 NBEAL1Q6ZS30 2694 aa13.3□□□□□ -0.28
SMC4-209ENST00000468653 IGLV4-3A0A075B6K6 122 aa13.3□□□□□ -0.28
SMC4-209ENST00000468653 DDTP30046 118 aa13.3□□□□□ -0.28
SMC4-209ENST00000468653 SPATA25Q9BR10 227 aa13.3□□□□□ -0.28
SMC4-209ENST00000468653 UBE2D4Q9Y2X8 147 aa13.3□□□□□ -0.28
SMC4-209ENST00000468653 A0A0J9YY99 117 aa13.3□□□□□ -0.28
SMC4-209ENST00000468653 C12orf74Q32Q52 190 aa13.3□□□□□ -0.28
SMC4-209ENST00000468653 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
SMC4-209ENST00000468653 STPG4Q8N801 248 aa13.3□□□□□ -0.28
SMC4-209ENST00000468653 ATP6V0E2Q8NHE4 81 aa13.3□□□□□ -0.28
SMC4-209ENST00000468653 VCX2Q9H322 139 aa13.3□□□□□ -0.28
SMC4-209ENST00000468653 TMEM243Q9BU79 118 aa13.29□□□□□ -0.28
SMC4-209ENST00000468653 TRBV25-1A0A075B6N4 114 aa13.28□□□□□ -0.28
SMC4-209ENST00000468653 A0A0J9YWU9 116 aa13.28□□□□□ -0.28
SMC4-209ENST00000468653 NPSP0C0P6 89 aa13.28□□□□□ -0.28
SMC4-209ENST00000468653 TMEM97Q5BJF2 176 aa13.28□□□□□ -0.28
SMC4-209ENST00000468653 C14orf144Q96I85 54 aa13.28□□□□□ -0.28
SMC4-209ENST00000468653 VSIG2Q96IQ7 327 aa13.28□□□□□ -0.28
SMC4-209ENST00000468653 MIEN1Q9BRT3 115 aa13.28□□□□□ -0.28
SMC4-209ENST00000468653 TRAV26-1A0A087WT03 109 aa13.27□□□□□ -0.28
SMC4-209ENST00000468653 IGLC3P0DOY3 106 aa13.27□□□□□ -0.28
SMC4-209ENST00000468653 DGAT2L7PQ6IED9 249 aa13.27□□□□□ -0.28
SMC4-209ENST00000468653 UBE2L6O14933 153 aa13.27□□□□□ -0.29
SMC4-209ENST00000468653 TM2D3Q9BRN9 247 aa13.27□□□□□ -0.29
SMC4-209ENST00000468653 TIMM21Q9BVV7 248 aa13.27□□□□□ -0.29
SMC4-209ENST00000468653 TRBV6-8A0A0A6YYG3 113 aa13.26□□□□□ -0.29
SMC4-209ENST00000468653 LINC00587B1AMM8 73 aa13.26□□□□□ -0.29
SMC4-209ENST00000468653 SMAGPQ0VAQ4 97 aa13.26□□□□□ -0.29
SMC4-209ENST00000468653 ANKRD39Q53RE8 183 aa13.26□□□□□ -0.29
SMC4-209ENST00000468653 UQCR10Q9UDW1 63 aa13.26□□□□□ -0.29
SMC4-209ENST00000468653 FGF6P10767 208 aa13.25□□□□□ -0.29
SMC4-209ENST00000468653 TCTAP57738 103 aa13.25□□□□□ -0.29
SMC4-209ENST00000468653 A0A096LPF7 62 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms