RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PTH2Q96A98 100 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 RNF185Q96GF1 192 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 PRELID3AQ96N28 172 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 CNFNQ9BYD5 112 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 KIF25-AS1Q9Y6Z4 181 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 MUC4Q99102 2169 aa2.87□□□□□ -1.95
TMEM39A-204ENST00000468545 MGAM2Q2M2H8 2515 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 A0A096LPF7 62 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 IGHV3-38A0A0C4DH36 116 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 LOC100131303A0A0U1RQF7 123 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 NXPH4O95158 308 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 MT-ND6P03923 174 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 ATP5G1P05496 136 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 NDUFA6P56556 154 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 LINC00315P59091 139 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 RAB5BP61020 215 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 OR10J3Q5JRS4 329 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 Q6ZTC4 211 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 NEGR1Q7Z3B1 354 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 BAGE3Q86Y29 109 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 ORMDL3Q8N138 153 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 ZNRF2Q8NHG8 242 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 PHLDA1Q8WV24 401 aaPredicted RBP2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 RPL39LQ96EH5 51 aaKnown RBP2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 ALKBH7Q9BT30 221 aaPredicted RBP2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 Q9UF83 564 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 HHLA3Q9XRX5 114 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 U3KQK5 164 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 NOTCH1P46531 2555 aa2.86□□□□□ -1.95
TMEM39A-204ENST00000468545 TRAV26-1A0A087WT03 109 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 DEFB131BA0A096LNP1 70 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 TEX48A0A1B0GUV7 120 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 H7C1H1 209 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 K7EQD1 137 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 M0QY20 66 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 NPYP01303 97 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 PMCHP20382 165 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 IFI27P40305 119 aaPredicted RBP2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 UFSP1Q6NVU6 142 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 ZFP2Q6ZN57 461 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 NIT1Q86X76 327 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 LINC00612Q8N6U2 182 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 SLC25A29Q8N8R3 303 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 MRAP2Q96G30 205 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 PRADC1Q9BSG0 188 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 C11orf68Q9H3H3 251 aaKnown RBP2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 MAP1LC3AQ9H492 121 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 ST20Q9HBF5 79 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 NIT2Q9NQR4 276 aa2.85□□□□□ -1.95
TMEM39A-204ENST00000468545 NACAE9PAV3 2078 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 A0A087WYN8 130 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 TRAV10A0A0B4J240 114 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 SDHAF1A6NFY7 115 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 IGLL5B9A064 214 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 TCAPO15273 167 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 CIDEAO60543 219 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST1H2BKO60814 126 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 PPBPP02775 128 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 S100A6P06703 90 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST1H2BJP06899 126 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 PRSS1P07477 247 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST1H2BOP23527 126 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST1H2BBP33778 126 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 CRYBA4P53673 196 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST1H2BDP58876 126 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST1H2BCP62807 126 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 RHOHQ15669 191 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST2H2BEQ16778 126 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 PDZD11Q5EBL8 140 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 ZFAND6Q6FIF0 208 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 RNASEKQ6P5S7 137 aaKnown RBP2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 FA2HQ7L5A8 372 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST1H2BHQ93079 126 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST1H2BNQ99877 126 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 HIST1H2BMQ99879 126 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 NDUFAF3Q9BU61 184 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 PRO0255Q9UI72 69 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 NBEAL2Q6ZNJ1 2754 aa2.84□□□□□ -1.95
TMEM39A-204ENST00000468545 TRBV7-3A0A075B6L6 115 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 TRBV6-4A0A1B0GX49 114 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 I3L3M4 83 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 PHOX2AO14813 284 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 NUPR1O60356 82 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 PPP1R17O96001 155 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 TSHBP01222 138 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 LINC00614P0C842 121 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 MT3P25713 68 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 FCER1GP30273 86 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 PMCHL1Q16048 86 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 STPG4Q8N801 248 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 Q8N8P6 123 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 ATP6V0E2Q8NHE4 81 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 C18orf32Q8TCD1 76 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 VSIG2Q96IQ7 327 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 DNAJC30Q96LL9 226 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 C18orf15Q96N68 181 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 C20orf78Q9BR46 151 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 ICOSQ9Y6W8 199 aa2.83□□□□□ -1.96
TMEM39A-204ENST00000468545 TRBV10-1A0A0K0K1A3 114 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms