RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 TSHBP01222 138 aa10.4□□□□□ -0.74
SNIP1-202ENST00000468040 PKIAP61925 76 aa10.4□□□□□ -0.74
SNIP1-202ENST00000468040 CHCHD5Q9BSY4 110 aa10.4□□□□□ -0.74
SNIP1-202ENST00000468040 NXT2Q9NPJ8 142 aaKnown RBP10.4□□□□□ -0.74
SNIP1-202ENST00000468040 PLECQ15149 4684 aaKnown RBP10.39□□□□□ -0.75
SNIP1-202ENST00000468040 LOC389332A0A1B0GUA5 103 aa10.39□□□□□ -0.75
SNIP1-202ENST00000468040 DNAH10OSP0CZ25 163 aa10.39□□□□□ -0.75
SNIP1-202ENST00000468040 DEFB104AQ8WTQ1 72 aa10.39□□□□□ -0.75
SNIP1-202ENST00000468040 K7EMI3 77 aa10.38□□□□□ -0.75
SNIP1-202ENST00000468040 UBE2L6O14933 153 aa10.38□□□□□ -0.75
SNIP1-202ENST00000468040 TRGC2P03986 189 aa10.38□□□□□ -0.75
SNIP1-202ENST00000468040 LINC01556Q5JQF7 62 aa10.38□□□□□ -0.75
SNIP1-202ENST00000468040 Q8N8P6 123 aa10.38□□□□□ -0.75
SNIP1-202ENST00000468040 IGLV2-18A0A075B6J9 118 aa10.37□□□□□ -0.75
SNIP1-202ENST00000468040 K7EP13 123 aa10.37□□□□□ -0.75
SNIP1-202ENST00000468040 NIT1Q86X76 327 aa10.37□□□□□ -0.75
SNIP1-202ENST00000468040 PRSS3P2Q8NHM4 247 aa10.37□□□□□ -0.75
SNIP1-202ENST00000468040 CHCHD7Q9BUK0 85 aa10.37□□□□□ -0.75
SNIP1-202ENST00000468040 TRAV9-2A0A087WT02 112 aa10.36□□□□□ -0.75
SNIP1-202ENST00000468040 A0A087WX48 190 aa10.36□□□□□ -0.75
SNIP1-202ENST00000468040 TMEM262E9PQX1 116 aa10.36□□□□□ -0.75
SNIP1-202ENST00000468040 H7C423 109 aa10.36□□□□□ -0.75
SNIP1-202ENST00000468040 ESDP10768 282 aa10.36□□□□□ -0.75
SNIP1-202ENST00000468040 IFI27P40305 119 aaPredicted RBP10.36□□□□□ -0.75
SNIP1-202ENST00000468040 TTC32Q5I0X7 151 aa10.36□□□□□ -0.75
SNIP1-202ENST00000468040 C10orf126Q8N4M7 172 aa10.35□□□□□ -0.75
SNIP1-202ENST00000468040 C18orf32Q8TCD1 76 aa10.35□□□□□ -0.75
SNIP1-202ENST00000468040 TMEM18Q96B42 140 aa10.35□□□□□ -0.75
SNIP1-202ENST00000468040 NBDYA0A0U1RRE5 68 aa10.34□□□□□ -0.75
SNIP1-202ENST00000468040 IGHV3-30P01768 117 aa10.34□□□□□ -0.75
SNIP1-202ENST00000468040 IGHV3-33P01772 117 aa10.34□□□□□ -0.75
SNIP1-202ENST00000468040 IGHV3-30-3P0DP02 117 aa10.34□□□□□ -0.75
SNIP1-202ENST00000468040 IGHV3-30-5P0DP03 117 aa10.34□□□□□ -0.75
SNIP1-202ENST00000468040 GAGE6Q13070 117 aa10.34□□□□□ -0.75
SNIP1-202ENST00000468040 ORMDL2Q53FV1 153 aa10.34□□□□□ -0.75
SNIP1-202ENST00000468040 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.33□□□□□ -0.76
SNIP1-202ENST00000468040 IGKV2-29A2NJV5 120 aaPredicted RBP10.33□□□□□ -0.76
SNIP1-202ENST00000468040 SMAGPQ0VAQ4 97 aa10.33□□□□□ -0.76
SNIP1-202ENST00000468040 LAGE3Q14657 143 aa10.33□□□□□ -0.76
SNIP1-202ENST00000468040 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
SNIP1-202ENST00000468040 AMMECR1LQ6DCA0 310 aa10.33□□□□□ -0.76
SNIP1-202ENST00000468040 FA2HQ7L5A8 372 aa10.33□□□□□ -0.76
SNIP1-202ENST00000468040 A0A1B0GUV1 79 aa10.32□□□□□ -0.76
SNIP1-202ENST00000468040 LINC01546A6NGU7 62 aa10.32□□□□□ -0.76
SNIP1-202ENST00000468040 ZNF25P17030 456 aaPredicted RBP10.32□□□□□ -0.76
SNIP1-202ENST00000468040 G0S2P27469 103 aa10.32□□□□□ -0.76
SNIP1-202ENST00000468040 RAB5BP61020 215 aa10.32□□□□□ -0.76
SNIP1-202ENST00000468040 RBX1P62877 108 aa10.32□□□□□ -0.76
SNIP1-202ENST00000468040 C20orf203Q8NBC4 194 aa10.32□□□□□ -0.76
SNIP1-202ENST00000468040 FGF6P10767 208 aa10.31□□□□□ -0.76
SNIP1-202ENST00000468040 MRPL52Q86TS9 123 aaKnown RBP10.31□□□□□ -0.76
SNIP1-202ENST00000468040 Q8N3U1 123 aa10.31□□□□□ -0.76
SNIP1-202ENST00000468040 AP5S1Q9NUS5 200 aa10.31□□□□□ -0.76
SNIP1-202ENST00000468040 ALMS1Q8TCU4 4167 aa10.3□□□□□ -0.76
SNIP1-202ENST00000468040 LINC00614P0C842 121 aa10.3□□□□□ -0.76
SNIP1-202ENST00000468040 Q0VG73 95 aa10.3□□□□□ -0.76
SNIP1-202ENST00000468040 RNASEKQ6P5S7 137 aaKnown RBP10.3□□□□□ -0.76
SNIP1-202ENST00000468040 Q6ZR54 194 aa10.3□□□□□ -0.76
SNIP1-202ENST00000468040 Q8N976 141 aa10.3□□□□□ -0.76
SNIP1-202ENST00000468040 TMEM101Q96IK0 257 aa10.3□□□□□ -0.76
SNIP1-202ENST00000468040 IBA57-AS1B1ANH7 110 aa10.29□□□□□ -0.76
SNIP1-202ENST00000468040 M0R2N4 97 aa10.29□□□□□ -0.76
SNIP1-202ENST00000468040 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
SNIP1-202ENST00000468040 BTF3P20290 206 aaKnown RBP10.29□□□□□ -0.76
SNIP1-202ENST00000468040 TIMM21Q9BVV7 248 aa10.29□□□□□ -0.76
SNIP1-202ENST00000468040 KRTAP1-5Q9BYS1 174 aa10.29□□□□□ -0.76
SNIP1-202ENST00000468040 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
SNIP1-202ENST00000468040 VPS13DQ5THJ4 4388 aa10.28□□□□□ -0.76
SNIP1-202ENST00000468040 LINC01549A6NIU2 74 aa10.28□□□□□ -0.76
SNIP1-202ENST00000468040 DGAT2L7PQ6IED9 249 aa10.28□□□□□ -0.76
SNIP1-202ENST00000468040 BAGE3Q86Y29 109 aa10.28□□□□□ -0.76
SNIP1-202ENST00000468040 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
SNIP1-202ENST00000468040 CHCHD1Q96BP2 118 aaKnown RBP10.28□□□□□ -0.76
SNIP1-202ENST00000468040 SPANXA1Q9NS26 97 aa10.28□□□□□ -0.76
SNIP1-202ENST00000468040 KLK12Q9UKR0 248 aa10.28□□□□□ -0.76
SNIP1-202ENST00000468040 CYSLTR1Q9Y271 337 aa10.28□□□□□ -0.76
SNIP1-202ENST00000468040 UBE2D4Q9Y2X8 147 aa10.28□□□□□ -0.76
SNIP1-202ENST00000468040 IGLV4-60A0A075B6I1 120 aa10.27□□□□□ -0.77
SNIP1-202ENST00000468040 RPL39P62891 51 aaKnown RBP10.27□□□□□ -0.77
SNIP1-202ENST00000468040 C2orf66Q6UXQ4 117 aa10.27□□□□□ -0.77
SNIP1-202ENST00000468040 URB1-AS1Q96HZ7 61 aa10.27□□□□□ -0.77
SNIP1-202ENST00000468040 LYSTQ99698 3801 aa10.27□□□□□ -0.77
SNIP1-202ENST00000468040 C1orf196B1AJZ1 125 aa10.26□□□□□ -0.77
SNIP1-202ENST00000468040 CRPP02741 224 aa10.26□□□□□ -0.77
SNIP1-202ENST00000468040 DNAH1Q9P2D7 4330 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 TRAV8-3A0A0A6YYJ7 113 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST1H2BKO60814 126 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST1H2BJP06899 126 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST1H2BOP23527 126 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST1H2BBP33778 126 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST1H2BDP58876 126 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST1H2BCP62807 126 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST2H2BEQ16778 126 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.25□□□□□ -0.77
SNIP1-202ENST00000468040 LINC00269Q8N2A0 174 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST1H2BHQ93079 126 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 TOMM6Q96B49 74 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST1H2BNQ99877 126 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 HIST1H2BMQ99879 126 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 PRR34Q9NV39 138 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 352.8 ms