RNA–Protein interactions for RNA: ENST00000467628.1

SATB1-211, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-211ENST00000467628 MYOM3Q5VTT5 1437 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 CASKIN1Q8WXD9 1431 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 CDK5RAP2Q96SN8 1893 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 WNK1Q9H4A3 2382 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 TRAV1-2A0A0B4J238 106 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 J3QR89 54 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 SIX6O95475 246 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 IL5P05113 134 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 PIPP12273 146 aaPredicted RBP-0.2□□□□□ -2.44
SATB1-211ENST00000467628 GUCA1AP43080 201 aaPredicted RBP-0.2□□□□□ -2.44
SATB1-211ENST00000467628 KRTAP6-1Q3LI64 71 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 Q5VSD8 79 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 BAGE3Q86Y29 109 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 UBE2DNLQ8IWF7 75 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 MAFIPQ8WZ33 124 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 SPTSSAQ969W0 71 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 TPT1P8Q9HAU6 139 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 COPZ2Q9P299 210 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 LINC00312Q9Y6C7 94 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 GOLGA4Q13439 2230 aaKnown RBP-0.2□□□□□ -2.44
SATB1-211ENST00000467628 URB1O60287 2271 aaKnown RBP-0.2□□□□□ -2.44
SATB1-211ENST00000467628 TGP01266 2768 aa-0.2□□□□□ -2.44
SATB1-211ENST00000467628 MYH13Q9UKX3 1938 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 GRIN2AQ12879 1464 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 A0A0D9SFI3 127 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 I3L2K1 104 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 K7ERU9 68 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 PRM1P04553 51 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 WFDC2Q14508 124 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 Q8N8P6 123 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 TCEAL4Q96EI5 215 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 AMELXQ99217 191 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 SNRNP25Q9BV90 132 aaKnown RBP-0.21□□□□□ -2.44
SATB1-211ENST00000467628 LINC00472Q9H8W2 130 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 CCDC167Q9P0B6 97 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 PAIP2BQ9ULR5 123 aaKnown RBP-0.21□□□□□ -2.44
SATB1-211ENST00000467628 USF3Q68DE3 2245 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 NBEAL1Q6ZS30 2694 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 ZNF609O15014 1411 aa-0.21□□□□□ -2.44
SATB1-211ENST00000467628 CSPG4Q6UVK1 2322 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 NHSL1Q5SYE7 1610 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 A6NIN4 97 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 HCG22E2RYF7 251 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 COPZ1P61923 177 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 SMCO1Q147U7 214 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 CFAP126Q5VTH2 177 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 Q6AWC8 147 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 RPL7L1Q6DKI1 246 aaKnown RBP-0.22□□□□□ -2.44
SATB1-211ENST00000467628 KCNRGQ8N5I3 272 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 SPTSSBQ8NFR3 76 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 TSTD1Q8NFU3 115 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 LSM10Q969L4 123 aaKnown RBP-0.22□□□□□ -2.44
SATB1-211ENST00000467628 PSMG3Q9BT73 122 aaPredicted RBP-0.22□□□□□ -2.44
SATB1-211ENST00000467628 AGPAT4-IT1Q9H0P7 198 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 PRO0255Q9UI72 69 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 NF1P21359 2839 aa-0.22□□□□□ -2.44
SATB1-211ENST00000467628 MRC1P22897 1456 aa-0.22□□□□□ -2.45
SATB1-211ENST00000467628 BICRAQ9NZM4 1560 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 FLNBO75369 2602 aaKnown RBP-0.23□□□□□ -2.45
SATB1-211ENST00000467628 IFT172Q9UG01 1749 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 TRAV13-2A0A0B4J235 113 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 FAM92AA1XBS5 289 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 M0R135 149 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 NDUFA2O43678 99 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 BCE1O60756 84 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 SNCGO76070 127 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 BTG2P78543 158 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 LZICQ8WZA0 190 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 PFDN5Q99471 154 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 LENEPQ9Y5L5 61 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 MYH6P13533 1939 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 CFTRP13569 1480 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 BCL9LQ86UU0 1499 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 PI4KAP42356 2102 aa-0.23□□□□□ -2.45
SATB1-211ENST00000467628 LRP1BQ9NZR2 4599 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 ARFGEF1Q9Y6D6 1849 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 K7EP13 123 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 M0R3E3 92 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 PPP1R17O96001 155 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 IFITM1P13164 125 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 HIST1H1DP16402 221 aaKnown RBP-0.24□□□□□ -2.45
SATB1-211ENST00000467628 SPRR1AP35321 89 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 ARPC4P59998 168 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 SELENOWP63302 87 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 DEFB109BQ30KR1 87 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 S100A7L2Q5SY68 101 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 C12orf73Q69YU5 71 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 MYO7BQ6PIF6 2116 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 Q8IZM0 81 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 SEC11CQ9BY50 192 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 LINC00470Q9BZP3 86 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 RERGLQ9H628 205 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 SCN3BQ9NY72 215 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 SERP1Q9Y6X1 66 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 R4GMQ9 66 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 FLGP20930 4061 aaPredicted RBP-0.24□□□□□ -2.45
SATB1-211ENST00000467628 PARP14Q460N5 1801 aa-0.24□□□□□ -2.45
SATB1-211ENST00000467628 DEFB123Q8N688 67 aa-0.25□□□□□ -2.45
SATB1-211ENST00000467628 SMIM4Q8WVI0 70 aa-0.25□□□□□ -2.45
SATB1-211ENST00000467628 SPANXDQ9BXN6 97 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms