RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 DEFA3P59666 94 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 FABP9Q0Z7S8 132 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 ZFP69Q49AA0 526 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 C2orf83Q53S99 150 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 Q5XG85 94 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 LYPD5Q6UWN5 251 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 SCXQ7RTU7 201 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 CACFD1Q9UGQ2 172 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 TRBV19A0A075B6N1 114 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 ZNF324O75467 553 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-207ENST00000467273 DPM2O94777 84 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 CFDP00746 253 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-207ENST00000467273 IFNA7P01567 189 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 IGKV1-39P01597 117 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 IGKV1D-39P04432 117 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 LINC00694P0DN24 101 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 BCL2P10415 239 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 PTHLHP12272 177 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 ELK1P19419 428 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 NDUFA6P56556 154 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 TAS2R46P59540 309 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 MEF2BQ02080 365 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-207ENST00000467273 HSD52Q0P140 79 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 CLLU1Q5K131 121 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 LAIR2Q6ISS4 152 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 GTF2H5Q6ZYL4 71 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 PACRGLQ8N7B6 248 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 CARD19Q96LW7 228 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 HIST1H4GQ99525 98 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 PRO0255Q9UI72 69 aa3.56□□□□□ -1.84
PTCD3-207ENST00000467273 TRGV2A0A075B6R0 118 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 TRAV12-2A0A075B6T6 113 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 TRAV8-3A0A0A6YYJ7 113 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 LOC107984640A0A0U1RRK4 108 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 TRDV1A0A1B0GX56 115 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 SNRPGP15A8MWD9 76 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 IBA57-AS1B1ANH7 110 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 OR5AC1P0C628 307 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 IGLC6P0CF74 106 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 HTN1P15515 57 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 AKR1C2P52895 323 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 S100A10P60903 97 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 CYCSP99999 105 aaKnown RBP3.55□□□□□ -1.84
PTCD3-207ENST00000467273 SPINK9Q5DT21 86 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 UFSP1Q6NVU6 142 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 ATP5L2Q7Z4Y8 100 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 FER1L6-AS1Q8NA97 138 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 FXYD5Q96DB9 178 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 SOSTQ9BQB4 213 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 PAXXQ9BUH6 204 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 PRO1933Q9H354 126 aa3.55□□□□□ -1.84
PTCD3-207ENST00000467273 J3QQQ9 107 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 K7EQD1 137 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 PHOX2AO14813 284 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 PSPHP1O15172 72 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 IGKV1-5P01602 117 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 RPL37AP61513 92 aaKnown RBP3.54□□□□□ -1.84
PTCD3-207ENST00000467273 LYRM7Q5U5X0 104 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 AMMECR1LQ6DCA0 310 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 LHFPL1Q86WI0 220 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 LINC00337Q8N6G1 96 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 OR8A1Q8NGG7 326 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 CIRBP-AS1Q8TBR5 109 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 DEDD2Q8WXF8 326 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 C11orf52Q96A22 123 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 AP1S3Q96PC3 154 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 PYGO2Q9BRQ0 406 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 EIF5A2Q9GZV4 153 aaKnown RBP3.54□□□□□ -1.84
PTCD3-207ENST00000467273 FXYD6Q9H0Q3 95 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 ANAPC10Q9UM13 185 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 CYSLTR1Q9Y271 337 aa3.54□□□□□ -1.84
PTCD3-207ENST00000467273 TRAV8-1A0A0A6YYK1 113 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 IGHV3-38A0A0C4DH36 116 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 A0A0J9YXV3 536 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 ZFP92A6NM28 416 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 KLLNB2CW77 178 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 GGTLC3B5MD39 225 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 GATA2P23769 480 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-207ENST00000467273 BTCP35070 178 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 LYZP61626 148 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 LINC01556Q5JQF7 62 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 MUC21Q5SSG8 566 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 Q6Q795 121 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 TEX43Q6ZNM6 134 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 Q6ZTI0 123 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 SH2D6Q7Z4S9 175 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 WFDC10BQ8IUB3 73 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 C5orf17Q8NAS9 161 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 OR5H2Q8NGV7 314 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 MED28Q9H204 178 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 NDUFB11Q9NX14 153 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 HHLA3Q9XRX5 114 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 FUT9Q9Y231 359 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 PKHD1L1Q86WI1 4243 aa3.53□□□□□ -1.84
PTCD3-207ENST00000467273 LOC389332A0A1B0GUA5 103 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 GABARAPH6UMI1 98 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 AGPAT2O15120 278 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 GABARAPO95166 117 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 NCR2O95944 276 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms