RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 F6UB75 175 aa8.22□□□□□ -1.09
SFXN3-204ENST00000466982 LY6HO94772 140 aa8.22□□□□□ -1.09
SFXN3-204ENST00000466982 RNASE4P34096 147 aaKnown RBP8.22□□□□□ -1.09
SFXN3-204ENST00000466982 CELSR1Q9NYQ6 3014 aa8.21□□□□□ -1.09
SFXN3-204ENST00000466982 IGHV7-81A0A0B4J1V7 117 aa8.21□□□□□ -1.1
SFXN3-204ENST00000466982 NDUFC2O95298 119 aa8.21□□□□□ -1.1
SFXN3-204ENST00000466982 POLR2KP53803 58 aaKnown RBP8.21□□□□□ -1.1
SFXN3-204ENST00000466982 SYNJ2BPP57105 145 aa8.21□□□□□ -1.1
SFXN3-204ENST00000466982 FHL2Q14192 279 aa8.21□□□□□ -1.1
SFXN3-204ENST00000466982 F5H697 171 aa8.21□□□□□ -1.1
SFXN3-204ENST00000466982 LEPROTO15243 131 aa8.21□□□□□ -1.1
SFXN3-204ENST00000466982 ADAMTSL4-AS1Q5T5F5 129 aa8.21□□□□□ -1.1
SFXN3-204ENST00000466982 CCDC140Q96MF4 163 aa8.21□□□□□ -1.1
SFXN3-204ENST00000466982 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
SFXN3-204ENST00000466982 A0A0J9YXV3 536 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 A0A0J9YXY3 114 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 TMEM89A2RUT3 159 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 SDHAF1A6NFY7 115 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 CACNA1AO00555 2505 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 SUMO4Q6EEV6 95 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 KIF25-AS1Q9Y6Z4 181 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.2□□□□□ -1.1
SFXN3-204ENST00000466982 C9orf139Q6ZV77 190 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 TMEM141Q96I45 108 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 TIMM17AQ99595 171 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 RETNQ9HD89 108 aa8.2□□□□□ -1.1
SFXN3-204ENST00000466982 TRAV21A0A0B4J279 112 aa8.19□□□□□ -1.1
SFXN3-204ENST00000466982 G3V318 75 aa8.19□□□□□ -1.1
SFXN3-204ENST00000466982 FP248Q71RG6 208 aaPredicted RBP8.19□□□□□ -1.1
SFXN3-204ENST00000466982 DCANP1Q8TF63 244 aa8.19□□□□□ -1.1
SFXN3-204ENST00000466982 SMIM26A0A096LP01 95 aa8.19□□□□□ -1.1
SFXN3-204ENST00000466982 VMO1Q7Z5L0 202 aa8.19□□□□□ -1.1
SFXN3-204ENST00000466982 APRG1Q8IVJ8 170 aa8.19□□□□□ -1.1
SFXN3-204ENST00000466982 IGKV3-7A0A075B6H7 116 aa8.18□□□□□ -1.1
SFXN3-204ENST00000466982 TRAV8-3A0A0A6YYJ7 113 aa8.18□□□□□ -1.1
SFXN3-204ENST00000466982 A8MZ25 164 aa8.18□□□□□ -1.1
SFXN3-204ENST00000466982 FAM74A4Q5TZK3 123 aa8.18□□□□□ -1.1
SFXN3-204ENST00000466982 LITAFQ99732 161 aa8.18□□□□□ -1.1
SFXN3-204ENST00000466982 LST1O00453 97 aa8.18□□□□□ -1.1
SFXN3-204ENST00000466982 VCYO14598 125 aa8.18□□□□□ -1.1
SFXN3-204ENST00000466982 PTPRQQ9UMZ3 2332 aa8.17□□□□□ -1.1
SFXN3-204ENST00000466982 IGHV4OR15-8A0A075B7B6 117 aa8.17□□□□□ -1.1
SFXN3-204ENST00000466982 A0A087WW49 117 aa8.17□□□□□ -1.1
SFXN3-204ENST00000466982 I3L3M4 83 aa8.17□□□□□ -1.1
SFXN3-204ENST00000466982 COX6CP09669 75 aa8.17□□□□□ -1.1
SFXN3-204ENST00000466982 TIMM21Q9BVV7 248 aa8.17□□□□□ -1.1
SFXN3-204ENST00000466982 ATP6V0E1O15342 81 aa8.16□□□□□ -1.1
SFXN3-204ENST00000466982 PPP1R17O96001 155 aa8.16□□□□□ -1.1
SFXN3-204ENST00000466982 IGHV3-30-3P0DP02 117 aa8.16□□□□□ -1.1
SFXN3-204ENST00000466982 ITLN2Q8WWU7 325 aaPredicted RBP8.16□□□□□ -1.1
SFXN3-204ENST00000466982 MRPL53Q96EL3 112 aaKnown RBP8.16□□□□□ -1.1
SFXN3-204ENST00000466982 PMAIP1Q13794 54 aa8.16□□□□□ -1.1
SFXN3-204ENST00000466982 TMEM243Q9BU79 118 aa8.16□□□□□ -1.1
SFXN3-204ENST00000466982 Q8N6K4 173 aa8.16□□□□□ -1.1
SFXN3-204ENST00000466982 DAND5Q8N907 189 aa8.16□□□□□ -1.1
SFXN3-204ENST00000466982 Q8N9W7 124 aa8.16□□□□□ -1.1
SFXN3-204ENST00000466982 FAM223AQ8IWN6 122 aa8.15□□□□□ -1.1
SFXN3-204ENST00000466982 AKAP6Q13023 2319 aa8.15□□□□□ -1.11
SFXN3-204ENST00000466982 RNASE13Q5GAN3 156 aaKnown RBP8.15□□□□□ -1.11
SFXN3-204ENST00000466982 LY6G5BQ8NDX9 201 aa8.15□□□□□ -1.11
SFXN3-204ENST00000466982 COL12A1Q99715 3063 aa8.14□□□□□ -1.11
SFXN3-204ENST00000466982 TRBV27A0A0K0K1C4 114 aa8.14□□□□□ -1.11
SFXN3-204ENST00000466982 ODF3BA8MYP8 253 aa8.14□□□□□ -1.11
SFXN3-204ENST00000466982 TRAV12-3A0A0B4J271 114 aa8.14□□□□□ -1.11
SFXN3-204ENST00000466982 USP17L23D6RBM5 183 aa8.14□□□□□ -1.11
SFXN3-204ENST00000466982 RPL11P62913 178 aaKnown RBP8.14□□□□□ -1.11
SFXN3-204ENST00000466982 UNQ9165/PRO28630Q6UXU0 137 aa8.14□□□□□ -1.11
SFXN3-204ENST00000466982 FAM110DQ8TAY7 271 aaPredicted RBP8.14□□□□□ -1.11
SFXN3-204ENST00000466982 Q96MF0 132 aa8.14□□□□□ -1.11
SFXN3-204ENST00000466982 U3KQE9 123 aa8.14□□□□□ -1.11
SFXN3-204ENST00000466982 SPTA1P02549 2419 aa8.14□□□□□ -1.11
SFXN3-204ENST00000466982 LENEPQ9Y5L5 61 aa8.13□□□□□ -1.11
SFXN3-204ENST00000466982 SORL1Q92673 2214 aa8.13□□□□□ -1.11
SFXN3-204ENST00000466982 ANKHD1Q8IWZ3 2542 aaKnown RBP8.13□□□□□ -1.11
SFXN3-204ENST00000466982 HRNRQ86YZ3 2850 aaPredicted RBP8.13□□□□□ -1.11
SFXN3-204ENST00000466982 NACAE9PAV3 2078 aa8.13□□□□□ -1.11
SFXN3-204ENST00000466982 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
SFXN3-204ENST00000466982 ACACBO00763 2458 aa8.12□□□□□ -1.11
SFXN3-204ENST00000466982 NBASA2RRP1 2371 aa8.12□□□□□ -1.11
SFXN3-204ENST00000466982 A0A0J9YX75 114 aa8.12□□□□□ -1.11
SFXN3-204ENST00000466982 KNCNA6PVL3 124 aa8.12□□□□□ -1.11
SFXN3-204ENST00000466982 IGFL3Q6UXB1 125 aa8.12□□□□□ -1.11
SFXN3-204ENST00000466982 FAM223BA6NKX1 122 aa8.11□□□□□ -1.11
SFXN3-204ENST00000466982 NXPH4O95158 308 aa8.11□□□□□ -1.11
SFXN3-204ENST00000466982 TRBV12-3P01733 135 aa8.11□□□□□ -1.11
SFXN3-204ENST00000466982 CD164Q04900 197 aa8.11□□□□□ -1.11
SFXN3-204ENST00000466982 IGHV1-69P01742 117 aa8.11□□□□□ -1.11
SFXN3-204ENST00000466982 MED14OSP0DP75 135 aa8.11□□□□□ -1.11
SFXN3-204ENST00000466982 CIRBPQ14011 172 aaKnown RBP8.11□□□□□ -1.11
SFXN3-204ENST00000466982 DAZ4Q86SG3 579 aaKnown RBP8.11□□□□□ -1.11
SFXN3-204ENST00000466982 TMEM61Q8N0U2 210 aa8.11□□□□□ -1.11
SFXN3-204ENST00000466982 DAZ1Q9NQZ3 744 aaKnown RBP8.11□□□□□ -1.11
SFXN3-204ENST00000466982 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
SFXN3-204ENST00000466982 COL6A6A6NMZ7 2263 aa8.11□□□□□ -1.11
SFXN3-204ENST00000466982 C20orf203Q8NBC4 194 aa8.1□□□□□ -1.11
SFXN3-204ENST00000466982 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.1□□□□□ -1.11
SFXN3-204ENST00000466982 M0QY20 66 aa8.1□□□□□ -1.11
SFXN3-204ENST00000466982 SOCS3O14543 225 aa8.1□□□□□ -1.11
SFXN3-204ENST00000466982 FAM104AQ969W3 186 aa8.1□□□□□ -1.11
SFXN3-204ENST00000466982 MIAQ16674 131 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms