RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 COTL1Q14019 142 aa14.69□□□□□ -0.06
CCDC78-207ENST00000466708 OR11H2Q8NH07 326 aa14.69□□□□□ -0.06
CCDC78-207ENST00000466708 K7EQD1 137 aa14.68□□□□□ -0.06
CCDC78-207ENST00000466708 SEC11AP67812 179 aa14.68□□□□□ -0.06
CCDC78-207ENST00000466708 TRBV7-3A0A075B6L6 115 aa14.67□□□□□ -0.06
CCDC78-207ENST00000466708 C11orf86A6NJI1 115 aa14.67□□□□□ -0.06
CCDC78-207ENST00000466708 SPATA3Q8NHX4 192 aa14.67□□□□□ -0.06
CCDC78-207ENST00000466708 IGLV4-3A0A075B6K6 122 aa14.66□□□□□ -0.06
CCDC78-207ENST00000466708 TRAV8-6A0A0B4J262 113 aa14.66□□□□□ -0.06
CCDC78-207ENST00000466708 RPL36AP83881 106 aaKnown RBP14.66□□□□□ -0.06
CCDC78-207ENST00000466708 RPL36ALQ969Q0 106 aaKnown RBP14.66□□□□□ -0.06
CCDC78-207ENST00000466708 CHCHD7Q9BUK0 85 aa14.66□□□□□ -0.06
CCDC78-207ENST00000466708 TTTY13Q9BZ97 58 aa14.66□□□□□ -0.06
CCDC78-207ENST00000466708 VCX2Q9H322 139 aa14.66□□□□□ -0.06
CCDC78-207ENST00000466708 TRBV25-1A0A075B6N4 114 aa14.66□□□□□ -0.06
CCDC78-207ENST00000466708 HERVK_113P61574 105 aa14.66□□□□□ -0.06
CCDC78-207ENST00000466708 NFE4Q86UQ8 179 aa14.66□□□□□ -0.06
CCDC78-207ENST00000466708 WFDC9Q8NEX5 89 aa14.66□□□□□ -0.06
CCDC78-207ENST00000466708 SPANXA1Q9NS26 97 aa14.66□□□□□ -0.06
CCDC78-207ENST00000466708 TRGV2A0A075B6R0 118 aa14.65□□□□□ -0.06
CCDC78-207ENST00000466708 ZNRF2Q8NHG8 242 aa14.65□□□□□ -0.06
CCDC78-207ENST00000466708 OPRPNQ99935 248 aaPredicted RBP14.65□□□□□ -0.06
CCDC78-207ENST00000466708 ORAOV1Q8WV07 137 aa14.64□□□□□ -0.07
CCDC78-207ENST00000466708 NOTCH3Q9UM47 2321 aa14.64□□□□□ -0.07
CCDC78-207ENST00000466708 GAGE12BA1L429 117 aa14.64□□□□□ -0.07
CCDC78-207ENST00000466708 GAGE7O76087 117 aa14.64□□□□□ -0.07
CCDC78-207ENST00000466708 GAGE12FP0CL80 117 aa14.64□□□□□ -0.07
CCDC78-207ENST00000466708 GAGE12GP0CL81 117 aa14.64□□□□□ -0.07
CCDC78-207ENST00000466708 GAGE12IP0CL82 117 aa14.64□□□□□ -0.07
CCDC78-207ENST00000466708 ZNF25P17030 456 aaPredicted RBP14.64□□□□□ -0.07
CCDC78-207ENST00000466708 PHLDA1Q8WV24 401 aaPredicted RBP14.64□□□□□ -0.07
CCDC78-207ENST00000466708 DAZ4Q86SG3 579 aaKnown RBP14.63□□□□□ -0.07
CCDC78-207ENST00000466708 MAPKAPK5-AS1Q8N8E1 139 aa14.63□□□□□ -0.07
CCDC78-207ENST00000466708 SLC25A29Q8N8R3 303 aa14.63□□□□□ -0.07
CCDC78-207ENST00000466708 AMELXQ99217 191 aa14.63□□□□□ -0.07
CCDC78-207ENST00000466708 PRADC1Q9BSG0 188 aa14.63□□□□□ -0.07
CCDC78-207ENST00000466708 CHAC1Q9BUX1 264 aa14.63□□□□□ -0.07
CCDC78-207ENST00000466708 DAZ3Q9NR90 486 aaKnown RBP14.63□□□□□ -0.07
CCDC78-207ENST00000466708 IGHV3-38A0A0C4DH36 116 aa14.62□□□□□ -0.07
CCDC78-207ENST00000466708 SMIM9A6NGZ8 99 aa14.62□□□□□ -0.07
CCDC78-207ENST00000466708 EMP1P54849 157 aa14.62□□□□□ -0.07
CCDC78-207ENST00000466708 COX11Q9Y6N1 276 aa14.62□□□□□ -0.07
CCDC78-207ENST00000466708 MYMXA0A1B0GTQ4 84 aa14.62□□□□□ -0.07
CCDC78-207ENST00000466708 UBE2D4Q9Y2X8 147 aa14.62□□□□□ -0.07
CCDC78-207ENST00000466708 F8P00451 2351 aa14.61□□□□□ -0.07
CCDC78-207ENST00000466708 TRBV6-4A0A1B0GX49 114 aa14.61□□□□□ -0.07
CCDC78-207ENST00000466708 WIPF1O43516 503 aa14.61□□□□□ -0.07
CCDC78-207ENST00000466708 TMEM170BQ5T4T1 132 aa14.61□□□□□ -0.07
CCDC78-207ENST00000466708 KIR2DL5BQ8NHK3 375 aa14.61□□□□□ -0.07
CCDC78-207ENST00000466708 ZMAT5Q9UDW3 170 aaKnown RBP14.61□□□□□ -0.07
CCDC78-207ENST00000466708 TEP1Q99973 2627 aaKnown RBP14.61□□□□□ -0.07
CCDC78-207ENST00000466708 A6NDN8 102 aa14.6□□□□□ -0.07
CCDC78-207ENST00000466708 FAM104AQ969W3 186 aa14.6□□□□□ -0.07
CCDC78-207ENST00000466708 TENM1Q9UKZ4 2725 aa14.6□□□□□ -0.07
CCDC78-207ENST00000466708 UBE2D3P61077 147 aa14.59□□□□□ -0.07
CCDC78-207ENST00000466708 UBE2D2P62837 147 aa14.59□□□□□ -0.07
CCDC78-207ENST00000466708 GAGE1Q13065 139 aa14.59□□□□□ -0.07
CCDC78-207ENST00000466708 TIMM21Q9BVV7 248 aa14.59□□□□□ -0.07
CCDC78-207ENST00000466708 VWFP04275 2813 aa14.59□□□□□ -0.07
CCDC78-207ENST00000466708 TAX1BP3O14907 124 aa14.59□□□□□ -0.07
CCDC78-207ENST00000466708 TAL2Q16559 108 aa14.59□□□□□ -0.07
CCDC78-207ENST00000466708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.58□□□□□ -0.08
CCDC78-207ENST00000466708 IGKV2-29A2NJV5 120 aaPredicted RBP14.58□□□□□ -0.08
CCDC78-207ENST00000466708 APOC4P55056 127 aa14.58□□□□□ -0.08
CCDC78-207ENST00000466708 LINC00469Q8N7U9 141 aa14.58□□□□□ -0.08
CCDC78-207ENST00000466708 ATRQ13535 2644 aa14.57□□□□□ -0.08
CCDC78-207ENST00000466708 TRGV4A0A0C4DH28 118 aa14.57□□□□□ -0.08
CCDC78-207ENST00000466708 X6R8D5 127 aa14.57□□□□□ -0.08
CCDC78-207ENST00000466708 FLNBO75369 2602 aaKnown RBP14.57□□□□□ -0.08
CCDC78-207ENST00000466708 MRPS36P82909 103 aaKnown RBP14.57□□□□□ -0.08
CCDC78-207ENST00000466708 LINC00612Q8N6U2 182 aa14.57□□□□□ -0.08
CCDC78-207ENST00000466708 GAGE12JA6NER3 117 aa14.56□□□□□ -0.08
CCDC78-207ENST00000466708 GAGE4Q13068 117 aa14.56□□□□□ -0.08
CCDC78-207ENST00000466708 GAGE5Q13069 117 aa14.56□□□□□ -0.08
CCDC78-207ENST00000466708 GAGE13Q4V321 117 aa14.56□□□□□ -0.08
CCDC78-207ENST00000466708 CEMP1Q6PRD7 247 aaPredicted RBP14.56□□□□□ -0.08
CCDC78-207ENST00000466708 A0A0J9YXV3 536 aa14.55□□□□□ -0.08
CCDC78-207ENST00000466708 ZNF815PA8K554 130 aa14.55□□□□□ -0.08
CCDC78-207ENST00000466708 SMAGPQ0VAQ4 97 aa14.55□□□□□ -0.08
CCDC78-207ENST00000466708 TM2D2Q9BX73 214 aa14.55□□□□□ -0.08
CCDC78-207ENST00000466708 GTSF1LQ9H1H1 148 aa14.55□□□□□ -0.08
CCDC78-207ENST00000466708 TMEM223A0PJW6 202 aa14.55□□□□□ -0.08
CCDC78-207ENST00000466708 ZNF22P17026 224 aaPredicted RBP14.55□□□□□ -0.08
CCDC78-207ENST00000466708 FHL2Q14192 279 aa14.55□□□□□ -0.08
CCDC78-207ENST00000466708 GCSHP23434 173 aa14.54□□□□□ -0.08
CCDC78-207ENST00000466708 DGAT2L7PQ6IED9 249 aa14.54□□□□□ -0.08
CCDC78-207ENST00000466708 Q6ZVH6 145 aa14.54□□□□□ -0.08
CCDC78-207ENST00000466708 CEND1Q8N111 149 aa14.54□□□□□ -0.08
CCDC78-207ENST00000466708 CSDC2Q9Y534 153 aaKnown RBP14.53□□□□□ -0.08
CCDC78-207ENST00000466708 H3BRM9 83 aa14.52□□□□□ -0.08
CCDC78-207ENST00000466708 TINCRA0A1B0GVN0 87 aa14.52□□□□□ -0.09
CCDC78-207ENST00000466708 LEPROTO15243 131 aa14.52□□□□□ -0.09
CCDC78-207ENST00000466708 NTM-AS1Q6ZSK4 140 aa14.52□□□□□ -0.09
CCDC78-207ENST00000466708 Q6ZUT4 128 aa14.52□□□□□ -0.09
CCDC78-207ENST00000466708 J3QQQ9 107 aa14.51□□□□□ -0.09
CCDC78-207ENST00000466708 HIST1H4GQ99525 98 aa14.51□□□□□ -0.09
CCDC78-207ENST00000466708 LYRM9A8MSI8 78 aa14.5□□□□□ -0.09
CCDC78-207ENST00000466708 DEFB130BP0DP73 79 aa14.5□□□□□ -0.09
CCDC78-207ENST00000466708 DEFB130AP0DP74 79 aa14.5□□□□□ -0.09
CCDC78-207ENST00000466708 KRTAP24-1Q3LI83 254 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms