RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 C9orf66Q5T8R8 295 aa9.72□□□□□ -0.85
UBE4B-206ENST00000466379 ATRQ13535 2644 aa9.72□□□□□ -0.85
UBE4B-206ENST00000466379 PMVKQ15126 192 aa9.72□□□□□ -0.85
UBE4B-206ENST00000466379 CST9LQ9H4G1 147 aa9.72□□□□□ -0.85
UBE4B-206ENST00000466379 IGLV4-69A0A075B6H9 119 aa9.71□□□□□ -0.85
UBE4B-206ENST00000466379 TRAV8-6A0A0B4J262 113 aa9.71□□□□□ -0.85
UBE4B-206ENST00000466379 RRN3P1Q2M238 152 aa9.71□□□□□ -0.85
UBE4B-206ENST00000466379 C16orf74Q96GX8 76 aa9.71□□□□□ -0.85
UBE4B-206ENST00000466379 GAGE12BA1L429 117 aa9.71□□□□□ -0.86
UBE4B-206ENST00000466379 C11orf86A6NJI1 115 aa9.71□□□□□ -0.86
UBE4B-206ENST00000466379 GAGE7O76087 117 aa9.71□□□□□ -0.86
UBE4B-206ENST00000466379 GAGE12FP0CL80 117 aa9.71□□□□□ -0.86
UBE4B-206ENST00000466379 GAGE12GP0CL81 117 aa9.71□□□□□ -0.86
UBE4B-206ENST00000466379 GAGE12IP0CL82 117 aa9.71□□□□□ -0.86
UBE4B-206ENST00000466379 MAPKAPK5-AS1Q8N8E1 139 aa9.71□□□□□ -0.86
UBE4B-206ENST00000466379 TEP1Q99973 2627 aaKnown RBP9.7□□□□□ -0.86
UBE4B-206ENST00000466379 LINC01549A6NIU2 74 aa9.7□□□□□ -0.86
UBE4B-206ENST00000466379 DLEU1O43261 78 aa9.7□□□□□ -0.86
UBE4B-206ENST00000466379 CEMP1Q6PRD7 247 aaPredicted RBP9.7□□□□□ -0.86
UBE4B-206ENST00000466379 ZNF25P17030 456 aaPredicted RBP9.7□□□□□ -0.86
UBE4B-206ENST00000466379 INSL3P51460 131 aa9.7□□□□□ -0.86
UBE4B-206ENST00000466379 DAZ2Q13117 558 aaKnown RBP9.7□□□□□ -0.86
UBE4B-206ENST00000466379 ZNRF2Q8NHG8 242 aa9.7□□□□□ -0.86
UBE4B-206ENST00000466379 TRRAPQ9Y4A5 3859 aa9.69□□□□□ -0.86
UBE4B-206ENST00000466379 TRAV4A0A0B4J268 109 aa9.69□□□□□ -0.86
UBE4B-206ENST00000466379 C12orf54Q6X4T0 127 aa9.69□□□□□ -0.86
UBE4B-206ENST00000466379 CHCHD7Q9BUK0 85 aa9.69□□□□□ -0.86
UBE4B-206ENST00000466379 C1orf43Q9BWL3 253 aa9.69□□□□□ -0.86
UBE4B-206ENST00000466379 IGLV4-3A0A075B6K6 122 aa9.68□□□□□ -0.86
UBE4B-206ENST00000466379 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.68□□□□□ -0.86
UBE4B-206ENST00000466379 IGKV2-29A2NJV5 120 aaPredicted RBP9.68□□□□□ -0.86
UBE4B-206ENST00000466379 TMEM97Q5BJF2 176 aa9.68□□□□□ -0.86
UBE4B-206ENST00000466379 DNAJC30Q96LL9 226 aa9.68□□□□□ -0.86
UBE4B-206ENST00000466379 VCX2Q9H322 139 aa9.68□□□□□ -0.86
UBE4B-206ENST00000466379 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
UBE4B-206ENST00000466379 RNASE13Q5GAN3 156 aaKnown RBP9.68□□□□□ -0.86
UBE4B-206ENST00000466379 K7EQD1 137 aa9.67□□□□□ -0.86
UBE4B-206ENST00000466379 FAM104AQ969W3 186 aa9.67□□□□□ -0.86
UBE4B-206ENST00000466379 TRBV25-1A0A075B6N4 114 aa9.67□□□□□ -0.86
UBE4B-206ENST00000466379 SIVA1O15304 175 aa9.67□□□□□ -0.86
UBE4B-206ENST00000466379 SLC25A29Q8N8R3 303 aa9.67□□□□□ -0.86
UBE4B-206ENST00000466379 C4orf48Q5BLP8 95 aa9.66□□□□□ -0.86
UBE4B-206ENST00000466379 PRADC1Q9BSG0 188 aa9.66□□□□□ -0.86
UBE4B-206ENST00000466379 GAGE12JA6NER3 117 aa9.66□□□□□ -0.86
UBE4B-206ENST00000466379 GAGE1Q13065 139 aa9.66□□□□□ -0.86
UBE4B-206ENST00000466379 GAGE4Q13068 117 aa9.66□□□□□ -0.86
UBE4B-206ENST00000466379 GAGE5Q13069 117 aa9.66□□□□□ -0.86
UBE4B-206ENST00000466379 GAGE13Q4V321 117 aa9.66□□□□□ -0.86
UBE4B-206ENST00000466379 OR11H2Q8NH07 326 aa9.66□□□□□ -0.86
UBE4B-206ENST00000466379 OVOL2Q9BRP0 275 aa9.66□□□□□ -0.86
UBE4B-206ENST00000466379 CHAC1Q9BUX1 264 aa9.66□□□□□ -0.86
UBE4B-206ENST00000466379 LOC100131303A0A0U1RQF7 123 aa9.65□□□□□ -0.86
UBE4B-206ENST00000466379 HSD52Q0P140 79 aa9.65□□□□□ -0.86
UBE4B-206ENST00000466379 TMEM170BQ5T4T1 132 aa9.65□□□□□ -0.86
UBE4B-206ENST00000466379 TRBV7-3A0A075B6L6 115 aa9.65□□□□□ -0.87
UBE4B-206ENST00000466379 CYSRT1A8MQ03 144 aa9.65□□□□□ -0.87
UBE4B-206ENST00000466379 E9PLD3 99 aa9.65□□□□□ -0.87
UBE4B-206ENST00000466379 A0A0J9YXV3 536 aa9.64□□□□□ -0.87
UBE4B-206ENST00000466379 KRTAP24-1Q3LI83 254 aa9.64□□□□□ -0.87
UBE4B-206ENST00000466379 UBE2D4Q9Y2X8 147 aa9.64□□□□□ -0.87
UBE4B-206ENST00000466379 RPL36AP83881 106 aaKnown RBP9.63□□□□□ -0.87
UBE4B-206ENST00000466379 RPL36ALQ969Q0 106 aaKnown RBP9.63□□□□□ -0.87
UBE4B-206ENST00000466379 X6R8D5 127 aa9.63□□□□□ -0.87
UBE4B-206ENST00000466379 MYMXA0A1B0GTQ4 84 aa9.63□□□□□ -0.87
UBE4B-206ENST00000466379 K7EP13 123 aa9.63□□□□□ -0.87
UBE4B-206ENST00000466379 TAX1BP3O14907 124 aa9.63□□□□□ -0.87
UBE4B-206ENST00000466379 DEFB130BP0DP73 79 aa9.63□□□□□ -0.87
UBE4B-206ENST00000466379 DEFB130AP0DP74 79 aa9.63□□□□□ -0.87
UBE4B-206ENST00000466379 PAPPA-AS1Q5QFB9 102 aa9.63□□□□□ -0.87
UBE4B-206ENST00000466379 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
UBE4B-206ENST00000466379 HIGD1BQ9P298 99 aa9.63□□□□□ -0.87
UBE4B-206ENST00000466379 PYGO1Q9Y3Y4 419 aa9.63□□□□□ -0.87
UBE4B-206ENST00000466379 DEFB135Q30KP9 77 aa9.62□□□□□ -0.87
UBE4B-206ENST00000466379 Q6ZUT4 128 aa9.62□□□□□ -0.87
UBE4B-206ENST00000466379 COX11Q9Y6N1 276 aa9.62□□□□□ -0.87
UBE4B-206ENST00000466379 TRGV4A0A0C4DH28 118 aa9.62□□□□□ -0.87
UBE4B-206ENST00000466379 TRBV10-1A0A0K0K1A3 114 aa9.62□□□□□ -0.87
UBE4B-206ENST00000466379 GCSHP23434 173 aa9.62□□□□□ -0.87
UBE4B-206ENST00000466379 UBE2D3P61077 147 aa9.62□□□□□ -0.87
UBE4B-206ENST00000466379 UBE2D2P62837 147 aa9.62□□□□□ -0.87
UBE4B-206ENST00000466379 NTM-AS1Q6ZSK4 140 aa9.62□□□□□ -0.87
UBE4B-206ENST00000466379 NFE4Q86UQ8 179 aa9.62□□□□□ -0.87
UBE4B-206ENST00000466379 TSPEAR-AS2P59090 65 aa9.61□□□□□ -0.87
UBE4B-206ENST00000466379 HERVK_113P61574 105 aa9.61□□□□□ -0.87
UBE4B-206ENST00000466379 WFDC9Q8NEX5 89 aa9.61□□□□□ -0.87
UBE4B-206ENST00000466379 AMELXQ99217 191 aa9.61□□□□□ -0.87
UBE4B-206ENST00000466379 NBEAL2Q6ZNJ1 2754 aa9.61□□□□□ -0.87
UBE4B-206ENST00000466379 IGHV3-64A0A075B6Q5 118 aa9.61□□□□□ -0.87
UBE4B-206ENST00000466379 ZNF815PA8K554 130 aa9.61□□□□□ -0.87
UBE4B-206ENST00000466379 DEFB4AO15263 64 aa9.61□□□□□ -0.87
UBE4B-206ENST00000466379 LINC00694P0DN24 101 aa9.61□□□□□ -0.87
UBE4B-206ENST00000466379 ZNF22P17026 224 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-206ENST00000466379 SEC11AP67812 179 aa9.6□□□□□ -0.87
UBE4B-206ENST00000466379 FHL2Q14192 279 aa9.6□□□□□ -0.87
UBE4B-206ENST00000466379 PLEKHB2Q96CS7 222 aa9.6□□□□□ -0.87
UBE4B-206ENST00000466379 SPANXA1Q9NS26 97 aa9.6□□□□□ -0.87
UBE4B-206ENST00000466379 FXYD2P54710 66 aa9.59□□□□□ -0.87
UBE4B-206ENST00000466379 SHISA2Q6UWI4 295 aa9.59□□□□□ -0.87
UBE4B-206ENST00000466379 NPSP0C0P6 89 aa9.59□□□□□ -0.87
UBE4B-206ENST00000466379 DAZ4Q86SG3 579 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms