RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 PTPN13Q12923 2485 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 ZNF292O60281 2723 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 FAM92AA1XBS5 289 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 SNCGO76070 127 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 SMCO1Q147U7 214 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 S100A7L2Q5SY68 101 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 CFAP126Q5VTH2 177 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 PFDN5Q99471 154 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 AKAP6Q13023 2319 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 BCL9LQ86UU0 1499 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 LRP2P98164 4655 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 KDM3BQ7LBC6 1761 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 A0A0D9SFI3 127 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 HCG22E2RYF7 251 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 WFDC2Q14508 124 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 Q8N8P6 123 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 LSM10Q969L4 123 aaKnown RBP-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 AMELXQ99217 191 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 SEC11CQ9BY50 192 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 LRP6O75581 1613 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 PHLPP1O60346 1717 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 ALMS1Q8TCU4 4167 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 SPEF2Q9C093 1822 aa-0.24□□□□□ -2.45
NUCKS1-202ENST00000464938 PTPRQQ9UMZ3 2332 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 BSNQ9UPA5 3926 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 TRAV13-2A0A0B4J235 113 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 SPRR2DP22532 72 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 ARPC4P59998 168 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 Q5VSD8 79 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 Q6AWC8 147 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 SNRNP25Q9BV90 132 aaKnown RBP-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 AGPAT4-IT1Q9H0P7 198 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 PPRC1Q5VV67 1664 aaKnown RBP-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 LRRC37A2A6NM11 1700 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 CHD6Q8TD26 2715 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 FAT2Q9NYQ8 4349 aa-0.25□□□□□ -2.45
NUCKS1-202ENST00000464938 SHROOM2Q13796 1616 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 MBD5Q9P267 1494 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 I3L2K1 104 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 M0R3E3 92 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 NDUFA2O43678 99 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 IFITM1P13164 125 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 C12orf73Q69YU5 71 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 PDCD10Q9BUL8 212 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 SCN3BQ9NY72 215 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 LENEPQ9Y5L5 61 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 SERP1Q9Y6X1 66 aa-0.26□□□□□ -2.45
NUCKS1-202ENST00000464938 PLXNB2O15031 1838 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 PATJQ8NI35 1801 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 ARAP2Q8WZ64 1704 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 RIMS1Q86UR5 1692 aaKnown RBP-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 PPIP5K1Q6PFW1 1433 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 M0R135 149 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 PPP1R17O96001 155 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 SMIM6P0DI80 62 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 HIST1H1DP16402 221 aaKnown RBP-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 BTG2P78543 158 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 LINC00470Q9BZP3 86 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 RERGLQ9H628 205 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 LINC00472Q9H8W2 130 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 R4GMQ9 66 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 DOCK1Q14185 1865 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 WNK3Q9BYP7 1800 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 QRICH2Q9H0J4 1663 aa-0.27□□□□□ -2.45
NUCKS1-202ENST00000464938 HECTD4Q9Y4D8 3996 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 FOCADQ5VW36 1801 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 VWFP04275 2813 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 TRAV22A0A0B4J277 110 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 BCE1O60756 84 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 CFDP00746 253 aaPredicted RBP-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 PRM1P04553 51 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 SELENOWP63302 87 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 RBM3P98179 157 aaKnown RBP-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 DEFB109BQ30KR1 87 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 KRTAP6-1Q3LI64 71 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 Q8IZM0 81 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 SMIM4Q8WVI0 70 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 COPS9Q8WXC6 57 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 SPCS1Q9Y6A9 102 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 DOPEY2Q9Y3R5 2298 aa-0.28□□□□□ -2.45
NUCKS1-202ENST00000464938 PKDREJQ9NTG1 2253 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 C10orf71Q711Q0 1435 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 ZNF236Q9UL36 1845 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 SPAG11BQ08648 103 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 C10orf128Q5T292 105 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 SPAG11AQ6PDA7 123 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 ARL11Q969Q4 196 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 AQP10Q96PS8 301 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 TP53AIP1Q9HCN2 124 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 NDUFA4L2Q9NRX3 87 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 STAB1Q9NY15 2570 aa-0.29□□□□□ -2.46
NUCKS1-202ENST00000464938 CPSF1Q10570 1443 aaKnown RBP-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 KIF21AQ7Z4S6 1674 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 MYH9P35579 1960 aaKnown RBP-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 ERCC6L2Q5T890 1561 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 PIGBOS1A0A0B4J2F0 54 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 K7EP13 123 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 SPRR1AP35321 89 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 S100A12P80511 92 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 COX17Q14061 63 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms