RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 Q8N8P6 123 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.22□□□□□ -2.37
GARNL3-213ENST00000464616 ZMYM4Q5VZL5 1548 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 MYO7AQ13402 2215 aa0.21□□□□□ -2.38
GARNL3-213ENST00000464616 G3V318 75 aa0.21□□□□□ -2.38
GARNL3-213ENST00000464616 TPPP2P59282 170 aa0.21□□□□□ -2.38
GARNL3-213ENST00000464616 SPAG11BQ08648 103 aa0.21□□□□□ -2.38
GARNL3-213ENST00000464616 SPAG11AQ6PDA7 123 aa0.21□□□□□ -2.38
GARNL3-213ENST00000464616 NPVFQ9HCQ7 196 aa0.21□□□□□ -2.38
GARNL3-213ENST00000464616 SPCS1Q9Y6A9 102 aa0.21□□□□□ -2.38
GARNL3-213ENST00000464616 CADP27708 2225 aa0.21□□□□□ -2.38
GARNL3-213ENST00000464616 APOC3P02656 99 aa0.2□□□□□ -2.38
GARNL3-213ENST00000464616 RBM3P98179 157 aaKnown RBP0.2□□□□□ -2.38
GARNL3-213ENST00000464616 TTC9CQ8N5M4 171 aa0.2□□□□□ -2.38
GARNL3-213ENST00000464616 MGST2Q99735 147 aa0.2□□□□□ -2.38
GARNL3-213ENST00000464616 SCN3BQ9NY72 215 aa0.2□□□□□ -2.38
GARNL3-213ENST00000464616 LRRC37A2A6NM11 1700 aa0.2□□□□□ -2.38
GARNL3-213ENST00000464616 PRDM2Q13029 1718 aa0.2□□□□□ -2.38
GARNL3-213ENST00000464616 KMT2DO14686 5537 aa0.19□□□□□ -2.38
GARNL3-213ENST00000464616 BCL9LQ86UU0 1499 aa0.19□□□□□ -2.38
GARNL3-213ENST00000464616 CTXND1A0A1B0GTU2 59 aa0.19□□□□□ -2.38
GARNL3-213ENST00000464616 M0R135 149 aa0.19□□□□□ -2.38
GARNL3-213ENST00000464616 AKAIN1P0CW23 69 aa0.19□□□□□ -2.38
GARNL3-213ENST00000464616 IFITM1P13164 125 aa0.19□□□□□ -2.38
GARNL3-213ENST00000464616 RPL13AP3Q6NVV1 102 aa0.19□□□□□ -2.38
GARNL3-213ENST00000464616 AMELXQ99217 191 aa0.19□□□□□ -2.38
GARNL3-213ENST00000464616 KDM3BQ7LBC6 1761 aa0.19□□□□□ -2.38
GARNL3-213ENST00000464616 KTN1Q86UP2 1357 aaKnown RBP0.19□□□□□ -2.38
GARNL3-213ENST00000464616 SYNE2Q8WXH0 6885 aaKnown RBP0.19□□□□□ -2.38
GARNL3-213ENST00000464616 PLXNB2O15031 1838 aa0.18□□□□□ -2.38
GARNL3-213ENST00000464616 FOCADQ5VW36 1801 aa0.18□□□□□ -2.38
GARNL3-213ENST00000464616 C10orf142B7Z368 130 aa0.18□□□□□ -2.38
GARNL3-213ENST00000464616 TNFP01375 233 aa0.18□□□□□ -2.38
GARNL3-213ENST00000464616 MYOZ3Q8TDC0 251 aa0.18□□□□□ -2.38
GARNL3-213ENST00000464616 PP6455Q8WZ26 134 aa0.18□□□□□ -2.38
GARNL3-213ENST00000464616 DYNLRB1Q9NP97 96 aa0.18□□□□□ -2.38
GARNL3-213ENST00000464616 V9GYH0 126 aa0.18□□□□□ -2.38
GARNL3-213ENST00000464616 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
GARNL3-213ENST00000464616 UQCR11O14957 56 aa0.17□□□□□ -2.38
GARNL3-213ENST00000464616 C5orf38Q86SI9 138 aa0.17□□□□□ -2.38
GARNL3-213ENST00000464616 NAV2Q8IVL1 2488 aa0.17□□□□□ -2.38
GARNL3-213ENST00000464616 ARAP2Q8WZ64 1704 aa0.17□□□□□ -2.38
GARNL3-213ENST00000464616 LSM10Q969L4 123 aaKnown RBP0.17□□□□□ -2.38
GARNL3-213ENST00000464616 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 TPRP12270 2363 aaKnown RBP0.16□□□□□ -2.38
GARNL3-213ENST00000464616 MAST4O15021 2626 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 TRBV7-3A0A075B6L6 115 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 CFDP00746 253 aaPredicted RBP0.16□□□□□ -2.38
GARNL3-213ENST00000464616 CATR1Q13166 79 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 TMEM170BQ5T4T1 132 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 COMMD6Q7Z4G1 85 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 BAGE2Q86Y30 109 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 PRO0255Q9UI72 69 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 TCHHQ07283 1943 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 NHSL1Q5SYE7 1610 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 DOCK1Q14185 1865 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 MRC1P22897 1456 aa0.16□□□□□ -2.38
GARNL3-213ENST00000464616 SBF2Q86WG5 1849 aa0.15□□□□□ -2.38
GARNL3-213ENST00000464616 CPSF1Q10570 1443 aaKnown RBP0.15□□□□□ -2.39
GARNL3-213ENST00000464616 TRAV22A0A0B4J277 110 aa0.15□□□□□ -2.39
GARNL3-213ENST00000464616 MIF4GDA9UHW6 222 aaKnown RBP0.15□□□□□ -2.39
GARNL3-213ENST00000464616 FSIP2Q5CZC0 6907 aa0.15□□□□□ -2.39
GARNL3-213ENST00000464616 SHANK2Q9UPX8 1470 aa0.15□□□□□ -2.39
GARNL3-213ENST00000464616 JMJD1CQ15652 2540 aa0.15□□□□□ -2.39
GARNL3-213ENST00000464616 PI4KAP42356 2102 aa0.14□□□□□ -2.39
GARNL3-213ENST00000464616 MACF1Q9UPN3 7388 aaKnown RBP0.14□□□□□ -2.39
GARNL3-213ENST00000464616 BIVM-ERCC5R4GMW8 1640 aa0.14□□□□□ -2.39
GARNL3-213ENST00000464616 PHLPP1O60346 1717 aa0.14□□□□□ -2.39
GARNL3-213ENST00000464616 F8VRH5 84 aa0.14□□□□□ -2.39
GARNL3-213ENST00000464616 M0R3E3 92 aa0.14□□□□□ -2.39
GARNL3-213ENST00000464616 ATP5EP56381 51 aaPredicted RBP0.14□□□□□ -2.39
GARNL3-213ENST00000464616 HAMPP81172 84 aa0.14□□□□□ -2.39
GARNL3-213ENST00000464616 MRPL54Q6P161 138 aaKnown RBP0.14□□□□□ -2.39
GARNL3-213ENST00000464616 IER3IP1Q9Y5U9 82 aa0.14□□□□□ -2.39
GARNL3-213ENST00000464616 TTC28Q96AY4 2481 aa0.14□□□□□ -2.39
GARNL3-213ENST00000464616 CACNA1CQ13936 2221 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 FAM24AA6NFZ4 105 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 DCDP81605 110 aaKnown RBP0.13□□□□□ -2.39
GARNL3-213ENST00000464616 MRPS10P82664 201 aaKnown RBP0.13□□□□□ -2.39
GARNL3-213ENST00000464616 WFDC2Q14508 124 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 WHAMMP3Q1A5X7 153 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 NDUFA4L2Q9NRX3 87 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 UQCR10Q9UDW1 63 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 A2ML1A8K2U0 1454 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 MBD5Q9P267 1494 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 CELSR2Q9HCU4 2923 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 BDP1A6H8Y1 2624 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 NALCNQ8IZF0 1738 aa0.13□□□□□ -2.39
GARNL3-213ENST00000464616 SMG6Q86US8 1419 aaKnown RBP0.13□□□□□ -2.39
GARNL3-213ENST00000464616 CACNA1HO95180 2353 aa0.12□□□□□ -2.39
GARNL3-213ENST00000464616 UBE2L5PA0A1B0GUS4 154 aa0.12□□□□□ -2.39
GARNL3-213ENST00000464616 UBE2L3P68036 154 aaKnown RBP0.12□□□□□ -2.39
GARNL3-213ENST00000464616 Q8IZM0 81 aa0.12□□□□□ -2.39
GARNL3-213ENST00000464616 TMEM203Q969S6 136 aa0.12□□□□□ -2.39
GARNL3-213ENST00000464616 LINC01558Q9Y6Z2 57 aa0.12□□□□□ -2.39
GARNL3-213ENST00000464616 RAPGEF6Q8TEU7 1601 aa0.12□□□□□ -2.39
GARNL3-213ENST00000464616 ABCA12Q86UK0 2595 aa0.11□□□□□ -2.39
GARNL3-213ENST00000464616 ERCC6L2Q5T890 1561 aa0.11□□□□□ -2.39
GARNL3-213ENST00000464616 ROCK2O75116 1388 aaKnown RBP0.11□□□□□ -2.39
GARNL3-213ENST00000464616 DLEU1O43261 78 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms