RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 TMEM243Q9BU79 118 aa10.29□□□□□ -0.76
RAB11FIP3-208ENST00000464263 TMEM70Q9BUB7 260 aa10.29□□□□□ -0.76
RAB11FIP3-208ENST00000464263 CTDSP1Q9GZU7 261 aa10.29□□□□□ -0.76
RAB11FIP3-208ENST00000464263 CARHSP1Q9Y2V2 147 aaKnown RBP10.29□□□□□ -0.76
RAB11FIP3-208ENST00000464263 PKHD1P08F94 4074 aa10.28□□□□□ -0.76
RAB11FIP3-208ENST00000464263 I3L3M4 83 aa10.28□□□□□ -0.76
RAB11FIP3-208ENST00000464263 RBX1P62877 108 aa10.28□□□□□ -0.76
RAB11FIP3-208ENST00000464263 Q8N976 141 aa10.28□□□□□ -0.76
RAB11FIP3-208ENST00000464263 TRBV27A0A0K0K1C4 114 aa10.27□□□□□ -0.77
RAB11FIP3-208ENST00000464263 PPP1R17O96001 155 aa10.27□□□□□ -0.77
RAB11FIP3-208ENST00000464263 PMCHP20382 165 aa10.27□□□□□ -0.77
RAB11FIP3-208ENST00000464263 AMTP48728 403 aa10.27□□□□□ -0.77
RAB11FIP3-208ENST00000464263 ENHOQ6UWT2 76 aa10.27□□□□□ -0.77
RAB11FIP3-208ENST00000464263 BTF3L4Q96K17 158 aa10.27□□□□□ -0.77
RAB11FIP3-208ENST00000464263 A0A087WTM6 91 aa10.26□□□□□ -0.77
RAB11FIP3-208ENST00000464263 A0A1B0GUV1 79 aa10.26□□□□□ -0.77
RAB11FIP3-208ENST00000464263 LRCOL1A6NCL2 159 aa10.26□□□□□ -0.77
RAB11FIP3-208ENST00000464263 TSHBP01222 138 aa10.26□□□□□ -0.77
RAB11FIP3-208ENST00000464263 ANGP03950 147 aaKnown RBP10.26□□□□□ -0.77
RAB11FIP3-208ENST00000464263 CKS2P33552 79 aa10.26□□□□□ -0.77
RAB11FIP3-208ENST00000464263 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
RAB11FIP3-208ENST00000464263 TM2D2Q9BX73 214 aa10.26□□□□□ -0.77
RAB11FIP3-208ENST00000464263 TRBV24-1A0A075B6N3 115 aa10.25□□□□□ -0.77
RAB11FIP3-208ENST00000464263 C7orf77A4D0Y5 90 aa10.25□□□□□ -0.77
RAB11FIP3-208ENST00000464263 VCYO14598 125 aa10.25□□□□□ -0.77
RAB11FIP3-208ENST00000464263 PSCAO43653 123 aa10.25□□□□□ -0.77
RAB11FIP3-208ENST00000464263 SUMO2P61956 95 aaKnown RBP10.25□□□□□ -0.77
RAB11FIP3-208ENST00000464263 Q0VG73 95 aa10.25□□□□□ -0.77
RAB11FIP3-208ENST00000464263 CLRN3Q8NCR9 226 aa10.25□□□□□ -0.77
RAB11FIP3-208ENST00000464263 PRR34Q9NV39 138 aa10.25□□□□□ -0.77
RAB11FIP3-208ENST00000464263 TMEM242Q9NWH2 141 aa10.25□□□□□ -0.77
RAB11FIP3-208ENST00000464263 DYNC1H1Q14204 4646 aaKnown RBP10.25□□□□□ -0.77
RAB11FIP3-208ENST00000464263 IGLV4-60A0A075B6I1 120 aa10.24□□□□□ -0.77
RAB11FIP3-208ENST00000464263 D6R8Y8 96 aa10.24□□□□□ -0.77
RAB11FIP3-208ENST00000464263 ESDP10768 282 aa10.24□□□□□ -0.77
RAB11FIP3-208ENST00000464263 KRTAP10-2P60368 255 aa10.24□□□□□ -0.77
RAB11FIP3-208ENST00000464263 SPATA12Q7Z6I5 190 aa10.24□□□□□ -0.77
RAB11FIP3-208ENST00000464263 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
RAB11FIP3-208ENST00000464263 C20orf203Q8NBC4 194 aa10.24□□□□□ -0.77
RAB11FIP3-208ENST00000464263 C20orf78Q9BR46 151 aa10.24□□□□□ -0.77
RAB11FIP3-208ENST00000464263 H7C423 109 aa10.23□□□□□ -0.77
RAB11FIP3-208ENST00000464263 UBE2L6O14933 153 aa10.23□□□□□ -0.77
RAB11FIP3-208ENST00000464263 TNFRSF6BO95407 300 aa10.23□□□□□ -0.77
RAB11FIP3-208ENST00000464263 APCSP02743 223 aa10.23□□□□□ -0.77
RAB11FIP3-208ENST00000464263 PPBPP02775 128 aa10.23□□□□□ -0.77
RAB11FIP3-208ENST00000464263 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
RAB11FIP3-208ENST00000464263 RMI2Q96E14 147 aa10.23□□□□□ -0.77
RAB11FIP3-208ENST00000464263 COX11Q9Y6N1 276 aa10.23□□□□□ -0.77
RAB11FIP3-208ENST00000464263 IGKV2D-24A0A075B6R9 120 aa10.22□□□□□ -0.77
RAB11FIP3-208ENST00000464263 TRAV9-1A0A075B6T8 112 aa10.22□□□□□ -0.77
RAB11FIP3-208ENST00000464263 EREGO14944 169 aa10.22□□□□□ -0.77
RAB11FIP3-208ENST00000464263 NPYP01303 97 aa10.22□□□□□ -0.77
RAB11FIP3-208ENST00000464263 RPL32P62910 135 aaKnown RBP10.22□□□□□ -0.77
RAB11FIP3-208ENST00000464263 RHEBQ15382 184 aa10.22□□□□□ -0.77
RAB11FIP3-208ENST00000464263 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.21□□□□□ -0.77
RAB11FIP3-208ENST00000464263 IGKV2-29A2NJV5 120 aaPredicted RBP10.21□□□□□ -0.77
RAB11FIP3-208ENST00000464263 PHOX2AO14813 284 aa10.21□□□□□ -0.77
RAB11FIP3-208ENST00000464263 CRPP02741 224 aa10.21□□□□□ -0.77
RAB11FIP3-208ENST00000464263 TMEM136Q6ZRR5 245 aa10.21□□□□□ -0.77
RAB11FIP3-208ENST00000464263 ORMDL3Q8N138 153 aa10.21□□□□□ -0.77
RAB11FIP3-208ENST00000464263 RPS10P5Q9NQ39 176 aa10.21□□□□□ -0.77
RAB11FIP3-208ENST00000464263 PGPEP1Q9NXJ5 209 aa10.21□□□□□ -0.77
RAB11FIP3-208ENST00000464263 MIAQ16674 131 aa10.2□□□□□ -0.78
RAB11FIP3-208ENST00000464263 C16orf90A8MZG2 172 aa10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 APOC3P02656 99 aa10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 FGF6P10767 208 aa10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 S100PP25815 95 aa10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 FUSP35637 526 aaKnown RBP eCLIP10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 REG3AQ06141 175 aa10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 WFDC2Q14508 124 aa10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 KRTAP26-1Q6PEX3 210 aa10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 CLPSL2Q6UWE3 100 aa10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 PRELID3AQ96N28 172 aa10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 KIR2DL4Q99706 377 aa10.19□□□□□ -0.78
RAB11FIP3-208ENST00000464263 PRSS47A8MTI9 375 aa10.18□□□□□ -0.78
RAB11FIP3-208ENST00000464263 FCER1GP30273 86 aa10.18□□□□□ -0.78
RAB11FIP3-208ENST00000464263 BAALCQ8WXS3 180 aa10.18□□□□□ -0.78
RAB11FIP3-208ENST00000464263 SMIM2Q9BVW6 85 aa10.18□□□□□ -0.78
RAB11FIP3-208ENST00000464263 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
RAB11FIP3-208ENST00000464263 ZNF25P17030 456 aaPredicted RBP10.17□□□□□ -0.78
RAB11FIP3-208ENST00000464263 AMMECR1LQ6DCA0 310 aa10.17□□□□□ -0.78
RAB11FIP3-208ENST00000464263 RNASEKQ6P5S7 137 aaKnown RBP10.17□□□□□ -0.78
RAB11FIP3-208ENST00000464263 MRPL52Q86TS9 123 aaKnown RBP10.17□□□□□ -0.78
RAB11FIP3-208ENST00000464263 SVBPQ8N300 66 aa10.17□□□□□ -0.78
RAB11FIP3-208ENST00000464263 Q8N814 137 aa10.17□□□□□ -0.78
RAB11FIP3-208ENST00000464263 LAMTOR2Q9Y2Q5 125 aa10.17□□□□□ -0.78
RAB11FIP3-208ENST00000464263 DNAH5Q8TE73 4624 aa10.17□□□□□ -0.78
RAB11FIP3-208ENST00000464263 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
RAB11FIP3-208ENST00000464263 SNAPINO95295 136 aa10.16□□□□□ -0.78
RAB11FIP3-208ENST00000464263 NDUFA5Q16718 116 aa10.16□□□□□ -0.78
RAB11FIP3-208ENST00000464263 LECT2O14960 151 aa10.15□□□□□ -0.78
RAB11FIP3-208ENST00000464263 TCAPO15273 167 aa10.15□□□□□ -0.78
RAB11FIP3-208ENST00000464263 CDPF1Q6NVV7 123 aa10.15□□□□□ -0.78
RAB11FIP3-208ENST00000464263 SLC7A5P1Q8MH63 180 aa10.15□□□□□ -0.78
RAB11FIP3-208ENST00000464263 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.78
RAB11FIP3-208ENST00000464263 IGLV10-54A0A075B6I4 117 aa10.14□□□□□ -0.79
RAB11FIP3-208ENST00000464263 TMEM101Q96IK0 257 aa10.14□□□□□ -0.79
RAB11FIP3-208ENST00000464263 CDC42SE2Q9NRR3 84 aa10.14□□□□□ -0.79
RAB11FIP3-208ENST00000464263 LRP1BQ9NZR2 4599 aa10.13□□□□□ -0.79
RAB11FIP3-208ENST00000464263 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms