RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 MANBALQ9NQG1 85 aa6.44□□□□□ -1.38
TMEM54-203ENST00000463914 IGKV2-24A0A0C4DH68 120 aa6.43□□□□□ -1.38
TMEM54-203ENST00000463914 S100A9P06702 114 aaKnown RBP6.43□□□□□ -1.38
TMEM54-203ENST00000463914 COX6A2Q02221 97 aa6.43□□□□□ -1.38
TMEM54-203ENST00000463914 HIGD2BQ4VC39 106 aa6.43□□□□□ -1.38
TMEM54-203ENST00000463914 ALKAL2Q6UX46 152 aa6.43□□□□□ -1.38
TMEM54-203ENST00000463914 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
TMEM54-203ENST00000463914 DPH3P1Q9H4G8 78 aa6.43□□□□□ -1.38
TMEM54-203ENST00000463914 TNXBP22105 4242 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 IGKV3OR2-268A0A0C4DH90 116 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 A0A1B0GUV1 79 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 GAGE12HA6NDE8 117 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 H7C1H1 209 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 IGLC6P0CF74 106 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 MAJINQ3KP22 176 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 WDR73Q6P4I2 378 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 FER1L6-AS1Q8NA97 138 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 PRSS3P2Q8NHM4 247 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 RNF213Q63HN8 5207 aa6.42□□□□□ -1.38
TMEM54-203ENST00000463914 IFNA1P01562 189 aa6.41□□□□□ -1.38
TMEM54-203ENST00000463914 AMTP48728 403 aa6.41□□□□□ -1.38
TMEM54-203ENST00000463914 BLOC1S1P78537 153 aa6.41□□□□□ -1.38
TMEM54-203ENST00000463914 RASL11AQ6T310 242 aa6.41□□□□□ -1.38
TMEM54-203ENST00000463914 GTSF1Q8WW33 167 aa6.41□□□□□ -1.38
TMEM54-203ENST00000463914 A0A096LNI7 61 aa6.4□□□□□ -1.38
TMEM54-203ENST00000463914 A0A0J9YXV3 536 aa6.4□□□□□ -1.38
TMEM54-203ENST00000463914 NDUFS6O75380 124 aaKnown RBP6.4□□□□□ -1.38
TMEM54-203ENST00000463914 BCL2P10415 239 aa6.4□□□□□ -1.38
TMEM54-203ENST00000463914 RPL35P42766 123 aaKnown RBP6.4□□□□□ -1.38
TMEM54-203ENST00000463914 RPS10P46783 165 aaKnown RBP6.4□□□□□ -1.38
TMEM54-203ENST00000463914 CENPWQ5EE01 88 aa6.4□□□□□ -1.38
TMEM54-203ENST00000463914 STPG4Q8N801 248 aa6.4□□□□□ -1.38
TMEM54-203ENST00000463914 OR2D3Q8NGH3 330 aa6.4□□□□□ -1.38
TMEM54-203ENST00000463914 LYPD6BQ8NI32 183 aa6.4□□□□□ -1.38
TMEM54-203ENST00000463914 C11orf52Q96A22 123 aa6.4□□□□□ -1.38
TMEM54-203ENST00000463914 PGLYRP4Q96LB8 373 aa6.4□□□□□ -1.38
TMEM54-203ENST00000463914 UBE2L6O14933 153 aa6.39□□□□□ -1.39
TMEM54-203ENST00000463914 PDE6DO43924 150 aa6.39□□□□□ -1.39
TMEM54-203ENST00000463914 TAGLN2P37802 199 aaKnown RBP6.39□□□□□ -1.39
TMEM54-203ENST00000463914 CACNG7P62955 275 aa6.39□□□□□ -1.39
TMEM54-203ENST00000463914 MEF2BQ02080 365 aaPredicted RBP6.39□□□□□ -1.39
TMEM54-203ENST00000463914 COTL1Q14019 142 aa6.39□□□□□ -1.39
TMEM54-203ENST00000463914 FAM210AQ96ND0 272 aa6.39□□□□□ -1.39
TMEM54-203ENST00000463914 GVQW2A0A096LPI5 108 aaPredicted RBP6.38□□□□□ -1.39
TMEM54-203ENST00000463914 CFAP161Q6P656 301 aa6.38□□□□□ -1.39
TMEM54-203ENST00000463914 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
TMEM54-203ENST00000463914 NIT2Q9NQR4 276 aa6.38□□□□□ -1.39
TMEM54-203ENST00000463914 MED9Q9NWA0 146 aa6.38□□□□□ -1.39
TMEM54-203ENST00000463914 RAB19A4D1S5 217 aa6.37□□□□□ -1.39
TMEM54-203ENST00000463914 C19orf71A6NCJ1 209 aa6.37□□□□□ -1.39
TMEM54-203ENST00000463914 TRGC1P0CF51 173 aa6.37□□□□□ -1.39
TMEM54-203ENST00000463914 RPS20P60866 119 aaKnown RBP6.37□□□□□ -1.39
TMEM54-203ENST00000463914 LINC00526Q96FQ7 95 aa6.37□□□□□ -1.39
TMEM54-203ENST00000463914 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.36□□□□□ -1.39
TMEM54-203ENST00000463914 TRAV26-2A0A0B4J265 109 aa6.36□□□□□ -1.39
TMEM54-203ENST00000463914 IGKV2-29A2NJV5 120 aaPredicted RBP6.36□□□□□ -1.39
TMEM54-203ENST00000463914 GAS8-AS1O95177 125 aa6.36□□□□□ -1.39
TMEM54-203ENST00000463914 KRTAP10-8P60410 259 aa6.36□□□□□ -1.39
TMEM54-203ENST00000463914 TEX261Q6UWH6 196 aa6.36□□□□□ -1.39
TMEM54-203ENST00000463914 LYZL1Q6UWQ5 148 aa6.36□□□□□ -1.39
TMEM54-203ENST00000463914 TRBV20OR9-2A0A075B6H5 130 aa6.35□□□□□ -1.39
TMEM54-203ENST00000463914 NTF3P20783 257 aa6.35□□□□□ -1.39
TMEM54-203ENST00000463914 CTRLP40313 264 aa6.35□□□□□ -1.39
TMEM54-203ENST00000463914 GNG4P50150 75 aa6.35□□□□□ -1.39
TMEM54-203ENST00000463914 FOXI1Q12951 378 aa6.35□□□□□ -1.39
TMEM54-203ENST00000463914 AMMECR1LQ6DCA0 310 aa6.35□□□□□ -1.39
TMEM54-203ENST00000463914 RNASEKQ6P5S7 137 aaKnown RBP6.35□□□□□ -1.39
TMEM54-203ENST00000463914 REG3GQ6UW15 175 aa6.35□□□□□ -1.39
TMEM54-203ENST00000463914 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
TMEM54-203ENST00000463914 GATD1Q8NB37 220 aa6.35□□□□□ -1.39
TMEM54-203ENST00000463914 RPL39LQ96EH5 51 aaKnown RBP6.35□□□□□ -1.39
TMEM54-203ENST00000463914 SMIM12Q96EX1 92 aa6.35□□□□□ -1.39
TMEM54-203ENST00000463914 F2Z2F3 143 aa6.34□□□□□ -1.39
TMEM54-203ENST00000463914 FGF6P10767 208 aa6.34□□□□□ -1.39
TMEM54-203ENST00000463914 EIF5A2Q9GZV4 153 aaKnown RBP6.34□□□□□ -1.39
TMEM54-203ENST00000463914 XKRY2A2RUG3 117 aa6.33□□□□□ -1.4
TMEM54-203ENST00000463914 TMEM250H0YL14 139 aa6.33□□□□□ -1.4
TMEM54-203ENST00000463914 XCL1P47992 114 aa6.33□□□□□ -1.4
TMEM54-203ENST00000463914 SRSF9Q13242 221 aaKnown RBP eCLIP6.33□□□□□ -1.4
TMEM54-203ENST00000463914 CARD19Q96LW7 228 aa6.33□□□□□ -1.4
TMEM54-203ENST00000463914 APCSP02743 223 aa6.32□□□□□ -1.4
TMEM54-203ENST00000463914 TWIST1Q15672 202 aa6.32□□□□□ -1.4
TMEM54-203ENST00000463914 Q6ZRP5 223 aa6.32□□□□□ -1.4
TMEM54-203ENST00000463914 OCC1Q8TAD7 63 aa6.32□□□□□ -1.4
TMEM54-203ENST00000463914 BIN3Q9NQY0 253 aa6.32□□□□□ -1.4
TMEM54-203ENST00000463914 IGHV1-58A0A0C4DH39 117 aa6.31□□□□□ -1.4
TMEM54-203ENST00000463914 K7EN84 100 aa6.31□□□□□ -1.4
TMEM54-203ENST00000463914 CCL25O15444 150 aa6.31□□□□□ -1.4
TMEM54-203ENST00000463914 NCR2O95944 276 aa6.31□□□□□ -1.4
TMEM54-203ENST00000463914 SRP19P09132 144 aaKnown RBP6.31□□□□□ -1.4
TMEM54-203ENST00000463914 CEBPGP53567 150 aa6.31□□□□□ -1.4
TMEM54-203ENST00000463914 FOXA3P55318 350 aaPredicted RBP6.31□□□□□ -1.4
TMEM54-203ENST00000463914 NUDT10Q8NFP7 164 aa6.31□□□□□ -1.4
TMEM54-203ENST00000463914 OR5A1Q8NGJ0 315 aa6.31□□□□□ -1.4
TMEM54-203ENST00000463914 NUDT11Q96G61 164 aa6.31□□□□□ -1.4
TMEM54-203ENST00000463914 CNFNQ9BYD5 112 aa6.31□□□□□ -1.4
TMEM54-203ENST00000463914 LINC00474Q9P2X8 69 aa6.31□□□□□ -1.4
TMEM54-203ENST00000463914 LINC00959A0A1B0GUT2 108 aa6.3□□□□□ -1.4
TMEM54-203ENST00000463914 FAM231BA6NCW3 169 aa6.3□□□□□ -1.4
TMEM54-203ENST00000463914 SDHAF1A6NFY7 115 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms