RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 TPPP2P59282 170 aa1.44□□□□□ -2.18
HERC4-208ENST00000463478 Q6ZQY7 126 aa1.44□□□□□ -2.18
HERC4-208ENST00000463478 TNRC6BQ9UPQ9 1833 aaKnown RBP1.44□□□□□ -2.18
HERC4-208ENST00000463478 LRRC7Q96NW7 1537 aa1.44□□□□□ -2.18
HERC4-208ENST00000463478 SHANK2Q9UPX8 1470 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 NALCNQ8IZF0 1738 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 SDK1Q7Z5N4 2213 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 MYH1P12882 1939 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 LOC100130705A0A1B0GUX0 176 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 C20orf202A1L168 122 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 NCR3O14931 201 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 CAV3P56539 151 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 C8orf59Q8N0T1 100 aaPredicted RBP1.43□□□□□ -2.18
HERC4-208ENST00000463478 DCHS2Q6V1P9 2916 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 SPENQ96T58 3664 aaKnown RBP1.43□□□□□ -2.18
HERC4-208ENST00000463478 F8P00451 2351 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 PRRC2BQ5JSZ5 2229 aaKnown RBP1.43□□□□□ -2.18
HERC4-208ENST00000463478 IFT140Q96RY7 1462 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 SIP14410 1827 aa1.43□□□□□ -2.18
HERC4-208ENST00000463478 PPP3R1P63098 170 aa1.42□□□□□ -2.18
HERC4-208ENST00000463478 IQCJQ1A5X6 159 aa1.42□□□□□ -2.18
HERC4-208ENST00000463478 Q6ZS92 163 aa1.42□□□□□ -2.18
HERC4-208ENST00000463478 TSKUQ8WUA8 353 aa1.42□□□□□ -2.18
HERC4-208ENST00000463478 SVEP1Q4LDE5 3571 aa1.42□□□□□ -2.18
HERC4-208ENST00000463478 PTPRFP10586 1907 aa1.42□□□□□ -2.18
HERC4-208ENST00000463478 HELZP42694 1942 aaKnown RBP1.42□□□□□ -2.18
HERC4-208ENST00000463478 UNC13CQ8NB66 2214 aa1.42□□□□□ -2.18
HERC4-208ENST00000463478 EXPH5Q8NEV8 1989 aa1.41□□□□□ -2.18
HERC4-208ENST00000463478 BLMP54132 1417 aaPredicted RBP1.41□□□□□ -2.18
HERC4-208ENST00000463478 TCRBV3S1A0A5B6 114 aa1.41□□□□□ -2.18
HERC4-208ENST00000463478 LYNX1P0DP58 116 aa1.41□□□□□ -2.18
HERC4-208ENST00000463478 CCL8P80075 99 aa1.41□□□□□ -2.18
HERC4-208ENST00000463478 ZNF818PQ6ZRF7 136 aa1.41□□□□□ -2.18
HERC4-208ENST00000463478 CYP2G1PQ6ZSU1 146 aa1.41□□□□□ -2.18
HERC4-208ENST00000463478 IFI27L1Q96BM0 104 aa1.41□□□□□ -2.18
HERC4-208ENST00000463478 HEATR1Q9H583 2144 aaKnown RBP1.41□□□□□ -2.18
HERC4-208ENST00000463478 COA4Q9NYJ1 87 aa1.41□□□□□ -2.18
HERC4-208ENST00000463478 BET1LQ9NYM9 111 aa1.41□□□□□ -2.18
HERC4-208ENST00000463478 MAP1AP78559 2803 aaPredicted RBP1.41□□□□□ -2.18
HERC4-208ENST00000463478 MED13Q9UHV7 2174 aa1.41□□□□□ -2.18
HERC4-208ENST00000463478 MAPKBP1O60336 1514 aa1.4□□□□□ -2.18
HERC4-208ENST00000463478 ALPK3Q96L96 1907 aa1.4□□□□□ -2.18
HERC4-208ENST00000463478 COL7A1Q02388 2944 aa1.4□□□□□ -2.18
HERC4-208ENST00000463478 ATMQ13315 3056 aa1.4□□□□□ -2.19
HERC4-208ENST00000463478 CACNA1HO95180 2353 aa1.4□□□□□ -2.19
HERC4-208ENST00000463478 MYO18AQ92614 2054 aaKnown RBP1.4□□□□□ -2.19
HERC4-208ENST00000463478 MYOM2P54296 1465 aa1.4□□□□□ -2.19
HERC4-208ENST00000463478 TRAV12-3A0A0B4J271 114 aa1.4□□□□□ -2.19
HERC4-208ENST00000463478 TRBV10-3A0A0K0K1G6 114 aa1.4□□□□□ -2.19
HERC4-208ENST00000463478 SSBP1Q04837 148 aaKnown RBP1.4□□□□□ -2.19
HERC4-208ENST00000463478 KLKP1Q107X0 134 aa1.4□□□□□ -2.19
HERC4-208ENST00000463478 FXYD3Q14802 87 aa1.4□□□□□ -2.19
HERC4-208ENST00000463478 C12orf57Q99622 126 aa1.4□□□□□ -2.19
HERC4-208ENST00000463478 BIVM-ERCC5R4GMW8 1640 aa1.4□□□□□ -2.19
HERC4-208ENST00000463478 MYOFQ9NZM1 2061 aa1.39□□□□□ -2.19
HERC4-208ENST00000463478 TRBV30A0A0K0K1B3 111 aa1.39□□□□□ -2.19
HERC4-208ENST00000463478 NBDYA0A0U1RRE5 68 aa1.39□□□□□ -2.19
HERC4-208ENST00000463478 RBAKDNA6NC62 111 aa1.39□□□□□ -2.19
HERC4-208ENST00000463478 SNAPC5O75971 98 aa1.39□□□□□ -2.19
HERC4-208ENST00000463478 EFNA4P52798 201 aa1.39□□□□□ -2.19
HERC4-208ENST00000463478 NPC2P61916 151 aa1.39□□□□□ -2.19
HERC4-208ENST00000463478 UBE2G1P62253 170 aa1.39□□□□□ -2.19
HERC4-208ENST00000463478 ZNF56Q15929 161 aa1.39□□□□□ -2.19
HERC4-208ENST00000463478 MRPL54Q6P161 138 aaKnown RBP1.39□□□□□ -2.19
HERC4-208ENST00000463478 C5orf56Q8N8D9 126 aa1.39□□□□□ -2.19
HERC4-208ENST00000463478 NWD1Q149M9 1564 aa1.38□□□□□ -2.19
HERC4-208ENST00000463478 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.38□□□□□ -2.19
HERC4-208ENST00000463478 LOC101927531A0A1B0GV80 90 aa1.38□□□□□ -2.19
HERC4-208ENST00000463478 SSSCA1O60232 199 aa1.38□□□□□ -2.19
HERC4-208ENST00000463478 Q8N8P6 123 aa1.38□□□□□ -2.19
HERC4-208ENST00000463478 LSM10Q969L4 123 aaKnown RBP1.38□□□□□ -2.19
HERC4-208ENST00000463478 CCL19Q99731 98 aa1.38□□□□□ -2.19
HERC4-208ENST00000463478 NBASA2RRP1 2371 aa1.38□□□□□ -2.19
HERC4-208ENST00000463478 CUBNO60494 3623 aa1.38□□□□□ -2.19
HERC4-208ENST00000463478 MCM3APO60318 1980 aa1.38□□□□□ -2.19
HERC4-208ENST00000463478 VPS13CQ709C8 3753 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 SPAARA0A1B0GVQ0 90 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 A0A1W2PPM0 123 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 ATP6V1G2-DDX39BF2Z307 99 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 SMIM6P0DI80 62 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 CATR1Q13166 79 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 SPINK13Q1W4C9 94 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 KRTAP20-1Q3LI63 56 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 FAM74A4Q5TZK3 123 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 GTF2H5Q6ZYL4 71 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 SVBPQ8N300 66 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 C14orf144Q96I85 54 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 AQP10Q96PS8 301 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 SPAG17Q6Q759 2223 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 ANK1P16157 1881 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 MRC2Q9UBG0 1479 aa1.37□□□□□ -2.19
HERC4-208ENST00000463478 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
HERC4-208ENST00000463478 TRIOO75962 3097 aa1.36□□□□□ -2.19
HERC4-208ENST00000463478 TNRC6AQ8NDV7 1962 aaKnown RBP1.36□□□□□ -2.19
HERC4-208ENST00000463478 FAM24AA6NFZ4 105 aa1.36□□□□□ -2.19
HERC4-208ENST00000463478 SIX6O95475 246 aa1.36□□□□□ -2.19
HERC4-208ENST00000463478 RBP2P50120 134 aa1.36□□□□□ -2.19
HERC4-208ENST00000463478 ATP5EP56381 51 aaPredicted RBP1.36□□□□□ -2.19
HERC4-208ENST00000463478 FXYD6P3P58550 94 aa1.36□□□□□ -2.19
HERC4-208ENST00000463478 C9orf153Q5TBE3 101 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms